RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 COA6Q5JTJ3 125 aaKnown RBP12.77□□□□□ -0.37
VLDLR-201ENST00000382096 GAGE2AQ6NT46 116 aa12.77□□□□□ -0.37
VLDLR-201ENST00000382096 Q9BRP9 147 aa12.77□□□□□ -0.37
VLDLR-201ENST00000382096 Q6ZRX8 168 aa12.76□□□□□ -0.37
VLDLR-201ENST00000382096 IGLV6-57P01721 117 aa12.75□□□□□ -0.37
VLDLR-201ENST00000382096 IGKCP01834 107 aa12.75□□□□□ -0.37
VLDLR-201ENST00000382096 KRTAP4-1Q9BYQ7 146 aa12.75□□□□□ -0.37
VLDLR-201ENST00000382096 LGALS3P17931 250 aaKnown RBP12.74□□□□□ -0.37
VLDLR-201ENST00000382096 RPS29P62273 56 aaKnown RBP12.74□□□□□ -0.37
VLDLR-201ENST00000382096 MIEN1Q9BRT3 115 aa12.74□□□□□ -0.37
VLDLR-201ENST00000382096 FSIP2Q5CZC0 6907 aa12.74□□□□□ -0.37
VLDLR-201ENST00000382096 SYS1-DBNDD2H3BUS1 97 aa12.73□□□□□ -0.37
VLDLR-201ENST00000382096 SSBP3-AS1Q7Z2R9 100 aa12.73□□□□□ -0.37
VLDLR-201ENST00000382096 MOBPQ13875 183 aa12.71□□□□□ -0.37
VLDLR-201ENST00000382096 SEC61BP60468 96 aaKnown RBP12.7□□□□□ -0.38
VLDLR-201ENST00000382096 SOSTDC1Q6X4U4 206 aa12.7□□□□□ -0.38
VLDLR-201ENST00000382096 IGLV9-49A0A0B4J1Y8 123 aa12.69□□□□□ -0.38
VLDLR-201ENST00000382096 S100A7L2Q5SY68 101 aa12.69□□□□□ -0.38
VLDLR-201ENST00000382096 LINC01545Q5VT33 79 aa12.69□□□□□ -0.38
VLDLR-201ENST00000382096 CRCT1Q9UGL9 99 aa12.69□□□□□ -0.38
VLDLR-201ENST00000382096 TRAV23DV6A0A075B6W5 121 aa12.68□□□□□ -0.38
VLDLR-201ENST00000382096 A0A0J9YXY3 114 aa12.68□□□□□ -0.38
VLDLR-201ENST00000382096 EIF4EBP3O60516 100 aaPredicted RBP12.68□□□□□ -0.38
VLDLR-201ENST00000382096 ADAMTSL4-AS1Q5T5F5 129 aa12.68□□□□□ -0.38
VLDLR-201ENST00000382096 Q8N377 158 aa12.68□□□□□ -0.38
VLDLR-201ENST00000382096 E9PLD3 99 aa12.67□□□□□ -0.38
VLDLR-201ENST00000382096 JOSD1Q15040 202 aaPredicted RBP12.67□□□□□ -0.38
VLDLR-201ENST00000382096 C3orf79P0CE67 100 aa12.66□□□□□ -0.38
VLDLR-201ENST00000382096 S100A1P23297 94 aa12.66□□□□□ -0.38
VLDLR-201ENST00000382096 PET117Q6UWS5 81 aa12.66□□□□□ -0.38
VLDLR-201ENST00000382096 ZNF73O43830 326 aaPredicted RBP12.65□□□□□ -0.38
VLDLR-201ENST00000382096 C5orf52A6NGY3 159 aa12.62□□□□□ -0.39
VLDLR-201ENST00000382096 SLC25A20O43772 301 aa12.62□□□□□ -0.39
VLDLR-201ENST00000382096 NPC2P61916 151 aa12.62□□□□□ -0.39
VLDLR-201ENST00000382096 LITAFQ99732 161 aa12.61□□□□□ -0.39
VLDLR-201ENST00000382096 CBY1Q9Y3M2 126 aa12.6□□□□□ -0.39
VLDLR-201ENST00000382096 ST20-AS1Q8NBB2 130 aa12.58□□□□□ -0.4
VLDLR-201ENST00000382096 SPANXCQ9NY87 97 aa12.58□□□□□ -0.4
VLDLR-201ENST00000382096 TIMM17BO60830 172 aa12.57□□□□□ -0.4
VLDLR-201ENST00000382096 LINC00308Q8TCZ7 52 aa12.57□□□□□ -0.4
VLDLR-201ENST00000382096 KRTDAPP60985 99 aa12.56□□□□□ -0.4
VLDLR-201ENST00000382096 C9orf153Q5TBE3 101 aa12.56□□□□□ -0.4
VLDLR-201ENST00000382096 HINT1P49773 126 aaPredicted RBP12.55□□□□□ -0.4
VLDLR-201ENST00000382096 XP32Q5T750 250 aa12.55□□□□□ -0.4
VLDLR-201ENST00000382096 LCE2CQ5TA81 110 aa12.55□□□□□ -0.4
VLDLR-201ENST00000382096 SPRR1BP22528 89 aa12.54□□□□□ -0.4
VLDLR-201ENST00000382096 TTTY13Q9BZ97 58 aa12.53□□□□□ -0.4
VLDLR-201ENST00000382096 HIST3H2BBQ8N257 126 aa12.52□□□□□ -0.41
VLDLR-201ENST00000382096 SPANXDQ9BXN6 97 aa12.51□□□□□ -0.41
VLDLR-201ENST00000382096 DHRS4-AS1Q9P1J3 65 aa12.5□□□□□ -0.41
VLDLR-201ENST00000382096 ANKRD39Q53RE8 183 aa12.49□□□□□ -0.41
VLDLR-201ENST00000382096 OR13C6PQ8NH95 151 aa12.49□□□□□ -0.41
VLDLR-201ENST00000382096 ZNF815PA8K554 130 aa12.48□□□□□ -0.41
VLDLR-201ENST00000382096 HIST1H2BLQ99880 126 aa12.48□□□□□ -0.41
VLDLR-201ENST00000382096 KRTAP19-2Q3LHN2 52 aa12.47□□□□□ -0.41
VLDLR-201ENST00000382096 SLC25A34Q6PIV7 304 aa12.47□□□□□ -0.41
VLDLR-201ENST00000382096 ATOH7Q8N100 152 aa12.47□□□□□ -0.41
VLDLR-201ENST00000382096 ELOF1P60002 83 aaKnown RBP12.46□□□□□ -0.41
VLDLR-201ENST00000382096 LINC00518Q8N0U6 118 aa12.45□□□□□ -0.42
VLDLR-201ENST00000382096 C20orf202A1L168 122 aa12.43□□□□□ -0.42
VLDLR-201ENST00000382096 COX7BP24311 80 aa12.42□□□□□ -0.42
VLDLR-201ENST00000382096 MT1HP80294 61 aa12.42□□□□□ -0.42
VLDLR-201ENST00000382096 C6orf99Q4VX62 202 aa12.42□□□□□ -0.42
VLDLR-201ENST00000382096 LIMD2Q9BT23 127 aa12.42□□□□□ -0.42
VLDLR-201ENST00000382096 LAMTOR3Q9UHA4 124 aa12.42□□□□□ -0.42
VLDLR-201ENST00000382096 PCP2Q8IVA1 136 aa12.39□□□□□ -0.43
VLDLR-201ENST00000382096 TRBV7-6A0A0J9YX20 115 aa12.38□□□□□ -0.43
VLDLR-201ENST00000382096 CFC1BP0CG36 223 aa12.38□□□□□ -0.43
VLDLR-201ENST00000382096 SNRPEP62304 92 aaKnown RBP12.38□□□□□ -0.43
VLDLR-201ENST00000382096 S100A2P29034 98 aa12.36□□□□□ -0.43
VLDLR-201ENST00000382096 CD164Q04900 197 aa12.36□□□□□ -0.43
VLDLR-201ENST00000382096 HRCT1Q6UXD1 115 aa12.36□□□□□ -0.43
VLDLR-201ENST00000382096 TEX49A0A1B0GTD5 131 aa12.34□□□□□ -0.43
VLDLR-201ENST00000382096 S100A6P06703 90 aa12.34□□□□□ -0.43
VLDLR-201ENST00000382096 AKR1D1P51857 326 aa12.34□□□□□ -0.43
VLDLR-201ENST00000382096 IFITM1P13164 125 aa12.33□□□□□ -0.44
VLDLR-201ENST00000382096 TAL2Q16559 108 aa12.33□□□□□ -0.44
VLDLR-201ENST00000382096 SCGB1D4Q6XE38 83 aa12.33□□□□□ -0.44
VLDLR-201ENST00000382096 COPS9Q8WXC6 57 aa12.33□□□□□ -0.44
VLDLR-201ENST00000382096 Q1RN00 199 aa12.32□□□□□ -0.44
VLDLR-201ENST00000382096 Q6ZVH6 145 aa12.32□□□□□ -0.44
VLDLR-201ENST00000382096 PRO1933Q9H354 126 aa12.32□□□□□ -0.44
VLDLR-201ENST00000382096 A0A1B0GWB2 263 aa12.31□□□□□ -0.44
VLDLR-201ENST00000382096 PCOTHQ58A44 107 aa12.31□□□□□ -0.44
VLDLR-201ENST00000382096 SMIM29Q86T20 159 aa12.31□□□□□ -0.44
VLDLR-201ENST00000382096 DEFB105AQ8NG35 78 aa12.31□□□□□ -0.44
VLDLR-201ENST00000382096 IGLV5-48A0A075B6I7 105 aa12.3□□□□□ -0.44
VLDLR-201ENST00000382096 LORP23490 312 aaPredicted RBP12.3□□□□□ -0.44
VLDLR-201ENST00000382096 Q5XG85 94 aa12.3□□□□□ -0.44
VLDLR-201ENST00000382096 IGLV8-61A0A075B6I0 122 aa12.29□□□□□ -0.44
VLDLR-201ENST00000382096 MUSTN1Q8IVN3 82 aa12.26□□□□□ -0.45
VLDLR-201ENST00000382096 A6NDN8 102 aa12.25□□□□□ -0.45
VLDLR-201ENST00000382096 C9orf92A6NGG3 77 aa12.25□□□□□ -0.45
VLDLR-201ENST00000382096 H7C2G1 150 aa12.25□□□□□ -0.45
VLDLR-201ENST00000382096 KRTAP10-6P60371 365 aaPredicted RBP12.25□□□□□ -0.45
VLDLR-201ENST00000382096 A4D1N5 150 aa12.24□□□□□ -0.45
VLDLR-201ENST00000382096 TRAV13-2A0A0B4J235 113 aa12.2□□□□□ -0.46
VLDLR-201ENST00000382096 SCGB1D1O95968 90 aa12.2□□□□□ -0.46
VLDLR-201ENST00000382096 C1orf195Q5TG92 126 aa12.2□□□□□ -0.46
VLDLR-201ENST00000382096 NHP2Q9NX24 153 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms