RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 LOC110117498A0A087WWA1 95 aa8.36□□□□□ -1.07
PRPF40B-202ENST00000380281 HIGD2AQ9BW72 106 aa8.36□□□□□ -1.07
PRPF40B-202ENST00000380281 SPART-AS1P0CW21 52 aa8.35□□□□□ -1.07
PRPF40B-202ENST00000380281 PMAIP1Q13794 54 aa8.35□□□□□ -1.07
PRPF40B-202ENST00000380281 PRYO14603 147 aa8.35□□□□□ -1.07
PRPF40B-202ENST00000380281 CAMK2N2Q96S95 79 aa8.35□□□□□ -1.07
PRPF40B-202ENST00000380281 LYRM9A8MSI8 78 aa8.34□□□□□ -1.07
PRPF40B-202ENST00000380281 IGHV4-30-4P0DP06 118 aa8.34□□□□□ -1.07
PRPF40B-202ENST00000380281 MUC7Q8TAX7 377 aa8.34□□□□□ -1.07
PRPF40B-202ENST00000380281 C9orf66Q5T8R8 295 aa8.34□□□□□ -1.07
PRPF40B-202ENST00000380281 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.34□□□□□ -1.07
PRPF40B-202ENST00000380281 C6orf48Q9UBA6 75 aa8.34□□□□□ -1.07
PRPF40B-202ENST00000380281 APOC4P55056 127 aa8.33□□□□□ -1.08
PRPF40B-202ENST00000380281 PRB2P02812 416 aaPredicted RBP8.33□□□□□ -1.08
PRPF40B-202ENST00000380281 LINC00612Q8N6U2 182 aa8.33□□□□□ -1.08
PRPF40B-202ENST00000380281 J3QKU1 62 aa8.32□□□□□ -1.08
PRPF40B-202ENST00000380281 PSPHP1O15172 72 aa8.32□□□□□ -1.08
PRPF40B-202ENST00000380281 Q6ZTC4 211 aa8.32□□□□□ -1.08
PRPF40B-202ENST00000380281 Q8NAQ8 132 aa8.32□□□□□ -1.08
PRPF40B-202ENST00000380281 IGKV2D-24A0A075B6R9 120 aa8.31□□□□□ -1.08
PRPF40B-202ENST00000380281 KMT2BQ9UMN6 2715 aaPredicted RBP8.31□□□□□ -1.08
PRPF40B-202ENST00000380281 COX17Q14061 63 aa8.3□□□□□ -1.08
PRPF40B-202ENST00000380281 LELP1Q5T871 98 aa8.3□□□□□ -1.08
PRPF40B-202ENST00000380281 Q6ZRU5 148 aa8.29□□□□□ -1.08
PRPF40B-202ENST00000380281 DIRC1Q969H9 104 aa8.29□□□□□ -1.08
PRPF40B-202ENST00000380281 KPRPQ5T749 579 aaPredicted RBP8.29□□□□□ -1.08
PRPF40B-202ENST00000380281 ZNF73O43830 326 aaPredicted RBP8.28□□□□□ -1.08
PRPF40B-202ENST00000380281 C3orf84H3BNL1 204 aa8.28□□□□□ -1.08
PRPF40B-202ENST00000380281 TENM2Q9NT68 2774 aa8.28□□□□□ -1.08
PRPF40B-202ENST00000380281 PRR4Q16378 134 aa8.27□□□□□ -1.09
PRPF40B-202ENST00000380281 Q6ZRP5 223 aa8.27□□□□□ -1.09
PRPF40B-202ENST00000380281 PRR15Q8IV56 129 aa8.27□□□□□ -1.09
PRPF40B-202ENST00000380281 OCR1Q9BZK8 76 aa8.27□□□□□ -1.09
PRPF40B-202ENST00000380281 A8MU10 97 aa8.27□□□□□ -1.09
PRPF40B-202ENST00000380281 COX7BP24311 80 aa8.26□□□□□ -1.09
PRPF40B-202ENST00000380281 FAM30AQ9NZY2 134 aa8.26□□□□□ -1.09
PRPF40B-202ENST00000380281 CSMD3Q7Z407 3707 aa8.26□□□□□ -1.09
PRPF40B-202ENST00000380281 RPL37AP8A6NKH3 93 aa8.26□□□□□ -1.09
PRPF40B-202ENST00000380281 IGKV4-1P06312 121 aa8.26□□□□□ -1.09
PRPF40B-202ENST00000380281 PDE6GP18545 87 aa8.24□□□□□ -1.09
PRPF40B-202ENST00000380281 SRRM2Q9UQ35 2752 aaKnown RBP8.24□□□□□ -1.09
PRPF40B-202ENST00000380281 IGLV6-57P01721 117 aa8.24□□□□□ -1.09
PRPF40B-202ENST00000380281 C1orf64Q8NEQ6 169 aa8.24□□□□□ -1.09
PRPF40B-202ENST00000380281 STAB2Q8WWQ8 2551 aa8.23□□□□□ -1.09
PRPF40B-202ENST00000380281 hDV103S1A0JD37 113 aa8.23□□□□□ -1.09
PRPF40B-202ENST00000380281 ERC2-IT1O76042 136 aa8.23□□□□□ -1.09
PRPF40B-202ENST00000380281 A0A0J9YWU9 116 aa8.22□□□□□ -1.09
PRPF40B-202ENST00000380281 SMIM29Q86T20 159 aa8.2□□□□□ -1.1
PRPF40B-202ENST00000380281 PRR34Q9NV39 138 aa8.2□□□□□ -1.1
PRPF40B-202ENST00000380281 TRAV22A0A0B4J277 110 aa8.19□□□□□ -1.1
PRPF40B-202ENST00000380281 A0A0G2JQZ4 141 aa8.19□□□□□ -1.1
PRPF40B-202ENST00000380281 A0A1W2PNN7 141 aa8.19□□□□□ -1.1
PRPF40B-202ENST00000380281 VPREB1P12018 145 aa8.19□□□□□ -1.1
PRPF40B-202ENST00000380281 NKAPP1Q8N9T2 125 aa8.19□□□□□ -1.1
PRPF40B-202ENST00000380281 FAM168BA1KXE4 195 aa8.18□□□□□ -1.1
PRPF40B-202ENST00000380281 A8MUN3 132 aa8.17□□□□□ -1.1
PRPF40B-202ENST00000380281 C15orf56Q8N910 161 aa8.17□□□□□ -1.1
PRPF40B-202ENST00000380281 DEFB131BA0A096LNP1 70 aa8.17□□□□□ -1.1
PRPF40B-202ENST00000380281 Q1T7F1 81 aa8.17□□□□□ -1.1
PRPF40B-202ENST00000380281 CASC10Q5T4H9 136 aa8.17□□□□□ -1.1
PRPF40B-202ENST00000380281 SERTAD4-AS1Q5TG53 156 aa8.17□□□□□ -1.1
PRPF40B-202ENST00000380281 KRTAP10-11P60412 298 aa8.16□□□□□ -1.1
PRPF40B-202ENST00000380281 M0R378 163 aa8.15□□□□□ -1.11
PRPF40B-202ENST00000380281 ELOF1P60002 83 aaKnown RBP8.15□□□□□ -1.11
PRPF40B-202ENST00000380281 SYCNQ0VAF6 134 aa8.15□□□□□ -1.11
PRPF40B-202ENST00000380281 ST20-AS1Q8NBB2 130 aa8.14□□□□□ -1.11
PRPF40B-202ENST00000380281 COL7A1Q02388 2944 aa8.13□□□□□ -1.11
PRPF40B-202ENST00000380281 CD164Q04900 197 aa8.13□□□□□ -1.11
PRPF40B-202ENST00000380281 EGFEM1PQ0D2K5 195 aa8.12□□□□□ -1.11
PRPF40B-202ENST00000380281 DEFB116Q30KQ4 102 aa8.12□□□□□ -1.11
PRPF40B-202ENST00000380281 C7orf33Q8WU49 177 aa8.12□□□□□ -1.11
PRPF40B-202ENST00000380281 ANK2Q01484 3957 aa8.12□□□□□ -1.11
PRPF40B-202ENST00000380281 C11orf45Q8TAV5 145 aa8.12□□□□□ -1.11
PRPF40B-202ENST00000380281 IGKV2-24A0A0C4DH68 120 aa8.11□□□□□ -1.11
PRPF40B-202ENST00000380281 LINC00528Q8N1L1 170 aa8.1□□□□□ -1.11
PRPF40B-202ENST00000380281 SPTSSBQ8NFR3 76 aa8.1□□□□□ -1.11
PRPF40B-202ENST00000380281 UBE2BP63146 152 aa8.1□□□□□ -1.11
PRPF40B-202ENST00000380281 GVQW2A0A096LPI5 108 aaPredicted RBP8.08□□□□□ -1.12
PRPF40B-202ENST00000380281 H3BQ85 93 aa8.08□□□□□ -1.12
PRPF40B-202ENST00000380281 KRTAP26-1Q6PEX3 210 aa8.08□□□□□ -1.12
PRPF40B-202ENST00000380281 MRPL55Q7Z7F7 128 aaKnown RBP8.08□□□□□ -1.12
PRPF40B-202ENST00000380281 PSCAO43653 123 aa8.08□□□□□ -1.12
PRPF40B-202ENST00000380281 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.08□□□□□ -1.12
PRPF40B-202ENST00000380281 ETDCA0A1B0GVM5 59 aa8.08□□□□□ -1.12
PRPF40B-202ENST00000380281 Q8N377 158 aa8.07□□□□□ -1.12
PRPF40B-202ENST00000380281 CHKB-CPT1BH3BT56 60 aa8.06□□□□□ -1.12
PRPF40B-202ENST00000380281 Q5VV11 94 aa8.06□□□□□ -1.12
PRPF40B-202ENST00000380281 RBM12B-AS1Q9P1G2 102 aa8.06□□□□□ -1.12
PRPF40B-202ENST00000380281 A0A096LNI7 61 aa8.05□□□□□ -1.12
PRPF40B-202ENST00000380281 ZCCHC13Q8WW36 166 aaKnown RBP8.04□□□□□ -1.12
PRPF40B-202ENST00000380281 C16orf90A8MZG2 172 aa8.02□□□□□ -1.13
PRPF40B-202ENST00000380281 K7EQZ3 153 aa8.02□□□□□ -1.13
PRPF40B-202ENST00000380281 Q9BRP9 147 aa8.02□□□□□ -1.13
PRPF40B-202ENST00000380281 C1orf137Q5JT78 98 aa8.02□□□□□ -1.13
PRPF40B-202ENST00000380281 LCE6AA0A183 80 aa8.01□□□□□ -1.13
PRPF40B-202ENST00000380281 PRLHP81277 87 aa8.01□□□□□ -1.13
PRPF40B-202ENST00000380281 LINC00588Q9Y4M8 146 aa8.01□□□□□ -1.13
PRPF40B-202ENST00000380281 KTN1-AS1Q86SY8 53 aa8□□□□□ -1.13
PRPF40B-202ENST00000380281 KRTAP24-1Q3LI83 254 aa8□□□□□ -1.13
PRPF40B-202ENST00000380281 LINC01556Q5JQF7 62 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms