RNA–Protein interactions for RNA: ENST00000379608.7

TFAP2A-202, Transcript of transcription factor AP-2 alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TFAP2A, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-202ENST00000379608 CASC10Q5T4H9 136 aa13.65□□□□□ -0.22
TFAP2A-202ENST00000379608 FAM168BA1KXE4 195 aa13.65□□□□□ -0.22
TFAP2A-202ENST00000379608 RPL37AP8A6NKH3 93 aa13.65□□□□□ -0.22
TFAP2A-202ENST00000379608 TRAV7A0A075B6U4 112 aa13.64□□□□□ -0.23
TFAP2A-202ENST00000379608 PDE6GP18545 87 aa13.64□□□□□ -0.23
TFAP2A-202ENST00000379608 TRBV7-6A0A0J9YX20 115 aa13.64□□□□□ -0.23
TFAP2A-202ENST00000379608 H7BZZ5 65 aa13.63□□□□□ -0.23
TFAP2A-202ENST00000379608 CXCL6P80162 114 aa13.63□□□□□ -0.23
TFAP2A-202ENST00000379608 SYCNQ0VAF6 134 aa13.63□□□□□ -0.23
TFAP2A-202ENST00000379608 C7orf33Q8WU49 177 aa13.62□□□□□ -0.23
TFAP2A-202ENST00000379608 DEFB131BA0A096LNP1 70 aa13.62□□□□□ -0.23
TFAP2A-202ENST00000379608 BPY2O14599 106 aa13.62□□□□□ -0.23
TFAP2A-202ENST00000379608 C4orf26Q17RF5 130 aa13.62□□□□□ -0.23
TFAP2A-202ENST00000379608 H3BNG1 76 aa13.58□□□□□ -0.24
TFAP2A-202ENST00000379608 Q8N377 158 aa13.58□□□□□ -0.24
TFAP2A-202ENST00000379608 NKAPP1Q8N9T2 125 aa13.58□□□□□ -0.24
TFAP2A-202ENST00000379608 PRB2P02812 416 aaPredicted RBP13.58□□□□□ -0.24
TFAP2A-202ENST00000379608 DNAH10Q8IVF4 4471 aa13.57□□□□□ -0.24
TFAP2A-202ENST00000379608 DNAH1Q9P2D7 4330 aa13.57□□□□□ -0.24
TFAP2A-202ENST00000379608 FAM236DA0A1B0GTK5 79 aa13.57□□□□□ -0.24
TFAP2A-202ENST00000379608 FAM236CP0DP71 79 aa13.57□□□□□ -0.24
TFAP2A-202ENST00000379608 LINC01556Q5JQF7 62 aa13.57□□□□□ -0.24
TFAP2A-202ENST00000379608 LYSTQ99698 3801 aa13.56□□□□□ -0.24
TFAP2A-202ENST00000379608 H3BQ85 93 aa13.56□□□□□ -0.24
TFAP2A-202ENST00000379608 Q5XG85 94 aa13.56□□□□□ -0.24
TFAP2A-202ENST00000379608 ST20-AS1Q8NBB2 130 aa13.55□□□□□ -0.24
TFAP2A-202ENST00000379608 C11orf45Q8TAV5 145 aa13.55□□□□□ -0.24
TFAP2A-202ENST00000379608 F8WEM9 126 aa13.55□□□□□ -0.24
TFAP2A-202ENST00000379608 COL6A5A8TX70 2615 aa13.54□□□□□ -0.24
TFAP2A-202ENST00000379608 NBEAL1Q6ZS30 2694 aa13.53□□□□□ -0.24
TFAP2A-202ENST00000379608 KRTAP7-1Q8IUC3 87 aa13.53□□□□□ -0.24
TFAP2A-202ENST00000379608 Q9BRP9 147 aa13.53□□□□□ -0.24
TFAP2A-202ENST00000379608 KCNQ1DNQ9H478 68 aa13.53□□□□□ -0.24
TFAP2A-202ENST00000379608 IGKV4-1P06312 121 aa13.52□□□□□ -0.24
TFAP2A-202ENST00000379608 CSMD3Q7Z407 3707 aa13.52□□□□□ -0.24
TFAP2A-202ENST00000379608 HRCT1Q6UXD1 115 aa13.52□□□□□ -0.25
TFAP2A-202ENST00000379608 KLKP1Q107X0 134 aa13.51□□□□□ -0.25
TFAP2A-202ENST00000379608 NREPQ16612 68 aa13.51□□□□□ -0.25
TFAP2A-202ENST00000379608 A0A0G2JQZ4 141 aa13.48□□□□□ -0.25
TFAP2A-202ENST00000379608 A0A1W2PNN7 141 aa13.48□□□□□ -0.25
TFAP2A-202ENST00000379608 ERC2-IT1O76042 136 aa13.48□□□□□ -0.25
TFAP2A-202ENST00000379608 DNAH3Q8TD57 4116 aa13.48□□□□□ -0.25
TFAP2A-202ENST00000379608 LINC00588Q9Y4M8 146 aa13.47□□□□□ -0.25
TFAP2A-202ENST00000379608 BCE1O60756 84 aa13.47□□□□□ -0.25
TFAP2A-202ENST00000379608 KRTAP24-1Q3LI83 254 aa13.46□□□□□ -0.25
TFAP2A-202ENST00000379608 HUWE1Q7Z6Z7 4374 aaKnown RBP13.46□□□□□ -0.26
TFAP2A-202ENST00000379608 A0A1W2PNM2 257 aa13.45□□□□□ -0.26
TFAP2A-202ENST00000379608 DNAH10OSP0CZ25 163 aa13.45□□□□□ -0.26
TFAP2A-202ENST00000379608 Q6ZRX8 168 aa13.44□□□□□ -0.26
TFAP2A-202ENST00000379608 KRTAP4-16G5E9R7 235 aaPredicted RBP13.43□□□□□ -0.26
TFAP2A-202ENST00000379608 C5orf47Q569G3 176 aa13.43□□□□□ -0.26
TFAP2A-202ENST00000379608 IGLV1-50A0A075B6I6 118 aa13.42□□□□□ -0.26
TFAP2A-202ENST00000379608 SRRM2Q9UQ35 2752 aaKnown RBP13.41□□□□□ -0.26
TFAP2A-202ENST00000379608 IGLV5-48A0A075B6I7 105 aa13.41□□□□□ -0.26
TFAP2A-202ENST00000379608 TMEM254Q8TBM7 123 aa13.41□□□□□ -0.26
TFAP2A-202ENST00000379608 MRAPQ8TCY5 172 aa13.41□□□□□ -0.26
TFAP2A-202ENST00000379608 ETDCA0A1B0GVM5 59 aa13.4□□□□□ -0.26
TFAP2A-202ENST00000379608 DNAH9Q9NYC9 4486 aa13.39□□□□□ -0.27
TFAP2A-202ENST00000379608 OCR1Q9BZK8 76 aa13.38□□□□□ -0.27
TFAP2A-202ENST00000379608 C1orf137Q5JT78 98 aa13.37□□□□□ -0.27
TFAP2A-202ENST00000379608 SERP1Q9Y6X1 66 aa13.37□□□□□ -0.27
TFAP2A-202ENST00000379608 FAM30AQ9NZY2 134 aa13.36□□□□□ -0.27
TFAP2A-202ENST00000379608 SMIM29Q86T20 159 aa13.36□□□□□ -0.27
TFAP2A-202ENST00000379608 EPM2AB3EWF7 344 aa13.35□□□□□ -0.27
TFAP2A-202ENST00000379608 TLX1NBP0CAT3 122 aa13.35□□□□□ -0.27
TFAP2A-202ENST00000379608 UBE2BP63146 152 aa13.35□□□□□ -0.27
TFAP2A-202ENST00000379608 TNP2Q05952 138 aa13.35□□□□□ -0.27
TFAP2A-202ENST00000379608 HIGD2AQ9BW72 106 aa13.35□□□□□ -0.27
TFAP2A-202ENST00000379608 LINC00474Q9P2X8 69 aa13.35□□□□□ -0.27
TFAP2A-202ENST00000379608 SPRR1AP35321 89 aa13.34□□□□□ -0.27
TFAP2A-202ENST00000379608 DHRS4-AS1Q9P1J3 65 aa13.34□□□□□ -0.27
TFAP2A-202ENST00000379608 MRPL55Q7Z7F7 128 aaKnown RBP13.33□□□□□ -0.28
TFAP2A-202ENST00000379608 FUSP35637 526 aaKnown RBP eCLIP13.32□□□□□ -0.28
TFAP2A-202ENST00000379608 FP248Q71RG6 208 aaPredicted RBP13.32□□□□□ -0.28
TFAP2A-202ENST00000379608 F8WDY8 70 aa13.31□□□□□ -0.28
TFAP2A-202ENST00000379608 PRYO14603 147 aa13.31□□□□□ -0.28
TFAP2A-202ENST00000379608 STAB2Q8WWQ8 2551 aa13.31□□□□□ -0.28
TFAP2A-202ENST00000379608 DEFB116Q30KQ4 102 aa13.3□□□□□ -0.28
TFAP2A-202ENST00000379608 TENM2Q9NT68 2774 aa13.3□□□□□ -0.28
TFAP2A-202ENST00000379608 PLA2G2DQ9UNK4 145 aa13.3□□□□□ -0.28
TFAP2A-202ENST00000379608 MGAM2Q2M2H8 2515 aa13.3□□□□□ -0.28
TFAP2A-202ENST00000379608 IGKV2-24A0A0C4DH68 120 aa13.29□□□□□ -0.28
TFAP2A-202ENST00000379608 FAM229BQ4G0N7 80 aa13.28□□□□□ -0.28
TFAP2A-202ENST00000379608 Q8NBF4 154 aa13.28□□□□□ -0.28
TFAP2A-202ENST00000379608 COL7A1Q02388 2944 aa13.28□□□□□ -0.28
TFAP2A-202ENST00000379608 A0A0U1RQV1 116 aa13.28□□□□□ -0.28
TFAP2A-202ENST00000379608 IGLV5-37A0A075B6J1 123 aa13.27□□□□□ -0.28
TFAP2A-202ENST00000379608 PRLHP81277 87 aa13.27□□□□□ -0.28
TFAP2A-202ENST00000379608 K7EQZ3 153 aa13.27□□□□□ -0.29
TFAP2A-202ENST00000379608 DSCR10P59022 87 aa13.27□□□□□ -0.29
TFAP2A-202ENST00000379608 KRTAP1-5Q9BYS1 174 aa13.26□□□□□ -0.29
TFAP2A-202ENST00000379608 REG3GQ6UW15 175 aa13.24□□□□□ -0.29
TFAP2A-202ENST00000379608 LINC00476Q8WZB0 136 aa13.23□□□□□ -0.29
TFAP2A-202ENST00000379608 A0A096LNI7 61 aa13.23□□□□□ -0.29
TFAP2A-202ENST00000379608 NDUFC1O43677 76 aa13.22□□□□□ -0.29
TFAP2A-202ENST00000379608 DNAH7Q8WXX0 4024 aa13.21□□□□□ -0.29
TFAP2A-202ENST00000379608 SPRR4Q96PI1 79 aa13.2□□□□□ -0.3
TFAP2A-202ENST00000379608 LINC00336Q6ZUF6 198 aa13.19□□□□□ -0.3
TFAP2A-202ENST00000379608 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.19□□□□□ -0.3
TFAP2A-202ENST00000379608 KRTAP11-1Q8IUC1 163 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms