RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 COX7BP24311 80 aa11.07□□□□□ -0.64
PCDHA1-201ENST00000378133 BPY2O14599 106 aa11.06□□□□□ -0.64
PCDHA1-201ENST00000378133 FAM229BQ4G0N7 80 aa11.06□□□□□ -0.64
PCDHA1-201ENST00000378133 TMEM254Q8TBM7 123 aa11.04□□□□□ -0.64
PCDHA1-201ENST00000378133 ATP5EP56381 51 aaPredicted RBP11.04□□□□□ -0.64
PCDHA1-201ENST00000378133 GVQW2A0A096LPI5 108 aaPredicted RBP11.03□□□□□ -0.64
PCDHA1-201ENST00000378133 ELOF1P60002 83 aaKnown RBP11.02□□□□□ -0.64
PCDHA1-201ENST00000378133 HIGD2BQ4VC39 106 aa11.02□□□□□ -0.64
PCDHA1-201ENST00000378133 WFDC10BQ8IUB3 73 aa11.01□□□□□ -0.65
PCDHA1-201ENST00000378133 Q8N9L7 120 aa11.01□□□□□ -0.65
PCDHA1-201ENST00000378133 PKD1L1Q8TDX9 2849 aa11.01□□□□□ -0.65
PCDHA1-201ENST00000378133 PMAIP1Q13794 54 aa11□□□□□ -0.65
PCDHA1-201ENST00000378133 ERC2-IT1O76042 136 aa10.99□□□□□ -0.65
PCDHA1-201ENST00000378133 CAMK2N2Q96S95 79 aa10.99□□□□□ -0.65
PCDHA1-201ENST00000378133 RETNQ9HD89 108 aa10.98□□□□□ -0.65
PCDHA1-201ENST00000378133 KPRPQ5T749 579 aaPredicted RBP10.98□□□□□ -0.65
PCDHA1-201ENST00000378133 KRTAP24-1Q3LI83 254 aa10.97□□□□□ -0.65
PCDHA1-201ENST00000378133 IGKV4-1P06312 121 aa10.96□□□□□ -0.65
PCDHA1-201ENST00000378133 FBN1P35555 2871 aaKnown RBP10.95□□□□□ -0.66
PCDHA1-201ENST00000378133 VPREB1P12018 145 aa10.94□□□□□ -0.66
PCDHA1-201ENST00000378133 KRTAP26-1Q6PEX3 210 aa10.94□□□□□ -0.66
PCDHA1-201ENST00000378133 Q6ZRU5 148 aa10.94□□□□□ -0.66
PCDHA1-201ENST00000378133 OXLD1Q5BKU9 147 aa10.94□□□□□ -0.66
PCDHA1-201ENST00000378133 Q6ZTC4 211 aa10.94□□□□□ -0.66
PCDHA1-201ENST00000378133 OCR1Q9BZK8 76 aa10.94□□□□□ -0.66
PCDHA1-201ENST00000378133 PRYO14603 147 aa10.93□□□□□ -0.66
PCDHA1-201ENST00000378133 M0R378 163 aa10.93□□□□□ -0.66
PCDHA1-201ENST00000378133 LINC00528Q8N1L1 170 aa10.93□□□□□ -0.66
PCDHA1-201ENST00000378133 C15orf56Q8N910 161 aa10.92□□□□□ -0.66
PCDHA1-201ENST00000378133 EGFEM1PQ0D2K5 195 aa10.91□□□□□ -0.66
PCDHA1-201ENST00000378133 C3orf84H3BNL1 204 aa10.91□□□□□ -0.66
PCDHA1-201ENST00000378133 ESRGQ1W209 222 aa10.91□□□□□ -0.66
PCDHA1-201ENST00000378133 FUSP35637 526 aaKnown RBP eCLIP10.9□□□□□ -0.66
PCDHA1-201ENST00000378133 H3BNG1 76 aa10.89□□□□□ -0.67
PCDHA1-201ENST00000378133 HIGD2AQ9BW72 106 aa10.89□□□□□ -0.67
PCDHA1-201ENST00000378133 KRTAP10-11P60412 298 aa10.88□□□□□ -0.67
PCDHA1-201ENST00000378133 TENM3Q9P273 2699 aa10.88□□□□□ -0.67
PCDHA1-201ENST00000378133 ANK2Q01484 3957 aa10.87□□□□□ -0.67
PCDHA1-201ENST00000378133 PRR15Q8IV56 129 aa10.87□□□□□ -0.67
PCDHA1-201ENST00000378133 Q6ZRP5 223 aa10.87□□□□□ -0.67
PCDHA1-201ENST00000378133 DEFB105AQ8NG35 78 aa10.86□□□□□ -0.67
PCDHA1-201ENST00000378133 MAST4O15021 2626 aa10.86□□□□□ -0.67
PCDHA1-201ENST00000378133 IGKV2D-24A0A075B6R9 120 aa10.86□□□□□ -0.67
PCDHA1-201ENST00000378133 FAM30AQ9NZY2 134 aa10.82□□□□□ -0.68
PCDHA1-201ENST00000378133 DEFB131BA0A096LNP1 70 aa10.8□□□□□ -0.68
PCDHA1-201ENST00000378133 SYCNQ0VAF6 134 aa10.8□□□□□ -0.68
PCDHA1-201ENST00000378133 LINC01556Q5JQF7 62 aa10.8□□□□□ -0.68
PCDHA1-201ENST00000378133 SMIM29Q86T20 159 aa10.8□□□□□ -0.68
PCDHA1-201ENST00000378133 Q8N377 158 aa10.8□□□□□ -0.68
PCDHA1-201ENST00000378133 LRCOL1A6NCL2 159 aa10.79□□□□□ -0.68
PCDHA1-201ENST00000378133 CD164Q04900 197 aa10.79□□□□□ -0.68
PCDHA1-201ENST00000378133 CMYA5Q8N3K9 4069 aa10.79□□□□□ -0.68
PCDHA1-201ENST00000378133 STAB1Q9NY15 2570 aa10.78□□□□□ -0.68
PCDHA1-201ENST00000378133 IGLV5-48A0A075B6I7 105 aa10.78□□□□□ -0.68
PCDHA1-201ENST00000378133 SERTAD4-AS1Q5TG53 156 aa10.78□□□□□ -0.68
PCDHA1-201ENST00000378133 C11orf45Q8TAV5 145 aa10.77□□□□□ -0.69
PCDHA1-201ENST00000378133 NKAPP1Q8N9T2 125 aa10.76□□□□□ -0.69
PCDHA1-201ENST00000378133 KCNQ1DNQ9H478 68 aa10.75□□□□□ -0.69
PCDHA1-201ENST00000378133 C7orf33Q8WU49 177 aa10.75□□□□□ -0.69
PCDHA1-201ENST00000378133 A0A1W2PNM2 257 aa10.74□□□□□ -0.69
PCDHA1-201ENST00000378133 hDV103S1A0JD37 113 aa10.73□□□□□ -0.69
PCDHA1-201ENST00000378133 A0A1B0GW54 56 aa10.72□□□□□ -0.69
PCDHA1-201ENST00000378133 LCE6AA0A183 80 aa10.71□□□□□ -0.69
PCDHA1-201ENST00000378133 NOTCH1P46531 2555 aa10.71□□□□□ -0.69
PCDHA1-201ENST00000378133 RPL37AP8A6NKH3 93 aa10.71□□□□□ -0.69
PCDHA1-201ENST00000378133 C1orf137Q5JT78 98 aa10.71□□□□□ -0.69
PCDHA1-201ENST00000378133 PSPHP1O15172 72 aa10.71□□□□□ -0.7
PCDHA1-201ENST00000378133 DNAH10OSP0CZ25 163 aa10.71□□□□□ -0.7
PCDHA1-201ENST00000378133 COL6A5A8TX70 2615 aa10.7□□□□□ -0.7
PCDHA1-201ENST00000378133 FAM168BA1KXE4 195 aa10.7□□□□□ -0.7
PCDHA1-201ENST00000378133 DHRS4-AS1Q9P1J3 65 aa10.7□□□□□ -0.7
PCDHA1-201ENST00000378133 CASC10Q5T4H9 136 aa10.69□□□□□ -0.7
PCDHA1-201ENST00000378133 C1orf64Q8NEQ6 169 aa10.69□□□□□ -0.7
PCDHA1-201ENST00000378133 A8MU10 97 aa10.69□□□□□ -0.7
PCDHA1-201ENST00000378133 ETDCA0A1B0GVM5 59 aa10.67□□□□□ -0.7
PCDHA1-201ENST00000378133 Q8NBF4 154 aa10.67□□□□□ -0.7
PCDHA1-201ENST00000378133 Q6ZRX8 168 aa10.67□□□□□ -0.7
PCDHA1-201ENST00000378133 Q9BRP9 147 aa10.67□□□□□ -0.7
PCDHA1-201ENST00000378133 DSCR10P59022 87 aa10.66□□□□□ -0.7
PCDHA1-201ENST00000378133 ST20-AS1Q8NBB2 130 aa10.66□□□□□ -0.7
PCDHA1-201ENST00000378133 ZCCHC13Q8WW36 166 aaKnown RBP10.66□□□□□ -0.7
PCDHA1-201ENST00000378133 LINC00588Q9Y4M8 146 aa10.66□□□□□ -0.7
PCDHA1-201ENST00000378133 TLX1NBP0CAT3 122 aa10.65□□□□□ -0.7
PCDHA1-201ENST00000378133 TNP2Q05952 138 aa10.65□□□□□ -0.7
PCDHA1-201ENST00000378133 K7EQZ3 153 aa10.65□□□□□ -0.7
PCDHA1-201ENST00000378133 Q1T7F1 81 aa10.65□□□□□ -0.7
PCDHA1-201ENST00000378133 DNAH3Q8TD57 4116 aa10.64□□□□□ -0.71
PCDHA1-201ENST00000378133 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.64□□□□□ -0.71
PCDHA1-201ENST00000378133 SPRR4Q96PI1 79 aa10.64□□□□□ -0.71
PCDHA1-201ENST00000378133 IGLV1-50A0A075B6I6 118 aa10.63□□□□□ -0.71
PCDHA1-201ENST00000378133 MRPL55Q7Z7F7 128 aaKnown RBP10.63□□□□□ -0.71
PCDHA1-201ENST00000378133 KRTAP4-16G5E9R7 235 aaPredicted RBP10.63□□□□□ -0.71
PCDHA1-201ENST00000378133 KRTAP7-1Q8IUC3 87 aa10.63□□□□□ -0.71
PCDHA1-201ENST00000378133 MDFIQ99750 246 aa10.63□□□□□ -0.71
PCDHA1-201ENST00000378133 PLA2G2DQ9UNK4 145 aa10.63□□□□□ -0.71
PCDHA1-201ENST00000378133 PRB2P02812 416 aaPredicted RBP10.61□□□□□ -0.71
PCDHA1-201ENST00000378133 TRAV22A0A0B4J277 110 aa10.61□□□□□ -0.71
PCDHA1-201ENST00000378133 RBM12B-AS1Q9P1G2 102 aa10.61□□□□□ -0.71
PCDHA1-201ENST00000378133 PRR4Q16378 134 aa10.6□□□□□ -0.71
PCDHA1-201ENST00000378133 HCG22E2RYF7 251 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms