RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 SYCNQ0VAF6 134 aa13.3□□□□□ -0.28
CLN5-201ENST00000377453 KRTAP24-1Q3LI83 254 aa13.3□□□□□ -0.28
CLN5-201ENST00000377453 C3orf84H3BNL1 204 aa13.3□□□□□ -0.28
CLN5-201ENST00000377453 CMYA5Q8N3K9 4069 aa13.29□□□□□ -0.28
CLN5-201ENST00000377453 PRB2P02812 416 aaPredicted RBP13.29□□□□□ -0.28
CLN5-201ENST00000377453 RMI2Q96E14 147 aa13.29□□□□□ -0.28
CLN5-201ENST00000377453 TM2D3Q9BRN9 247 aa13.29□□□□□ -0.28
CLN5-201ENST00000377453 PDE6GP18545 87 aa13.28□□□□□ -0.28
CLN5-201ENST00000377453 C7orf33Q8WU49 177 aa13.28□□□□□ -0.28
CLN5-201ENST00000377453 TRBV7-6A0A0J9YX20 115 aa13.27□□□□□ -0.28
CLN5-201ENST00000377453 TRAV7A0A075B6U4 112 aa13.26□□□□□ -0.29
CLN5-201ENST00000377453 H3BNG1 76 aa13.26□□□□□ -0.29
CLN5-201ENST00000377453 CXCL6P80162 114 aa13.26□□□□□ -0.29
CLN5-201ENST00000377453 NKAPP1Q8N9T2 125 aa13.26□□□□□ -0.29
CLN5-201ENST00000377453 LINC01556Q5JQF7 62 aa13.25□□□□□ -0.29
CLN5-201ENST00000377453 C11orf45Q8TAV5 145 aa13.25□□□□□ -0.29
CLN5-201ENST00000377453 BPY2O14599 106 aa13.25□□□□□ -0.29
CLN5-201ENST00000377453 RPS28P62857 69 aaKnown RBP13.25□□□□□ -0.29
CLN5-201ENST00000377453 H7BZZ5 65 aa13.23□□□□□ -0.29
CLN5-201ENST00000377453 Q8N377 158 aa13.22□□□□□ -0.29
CLN5-201ENST00000377453 NBEAL1Q6ZS30 2694 aa13.21□□□□□ -0.29
CLN5-201ENST00000377453 H3BQ85 93 aa13.21□□□□□ -0.29
CLN5-201ENST00000377453 ST20-AS1Q8NBB2 130 aa13.2□□□□□ -0.3
CLN5-201ENST00000377453 C4orf26Q17RF5 130 aa13.19□□□□□ -0.3
CLN5-201ENST00000377453 FAM236DA0A1B0GTK5 79 aa13.19□□□□□ -0.3
CLN5-201ENST00000377453 FAM236CP0DP71 79 aa13.19□□□□□ -0.3
CLN5-201ENST00000377453 KCNQ1DNQ9H478 68 aa13.18□□□□□ -0.3
CLN5-201ENST00000377453 Q9BRP9 147 aa13.18□□□□□ -0.3
CLN5-201ENST00000377453 KRTAP7-1Q8IUC3 87 aa13.17□□□□□ -0.3
CLN5-201ENST00000377453 F8WEM9 126 aa13.16□□□□□ -0.3
CLN5-201ENST00000377453 NREPQ16612 68 aa13.16□□□□□ -0.3
CLN5-201ENST00000377453 LINC00588Q9Y4M8 146 aa13.16□□□□□ -0.3
CLN5-201ENST00000377453 IGKV4-1P06312 121 aa13.15□□□□□ -0.3
CLN5-201ENST00000377453 MRAPQ8TCY5 172 aa13.13□□□□□ -0.31
CLN5-201ENST00000377453 ERC2-IT1O76042 136 aa13.13□□□□□ -0.31
CLN5-201ENST00000377453 DNAH10OSP0CZ25 163 aa13.13□□□□□ -0.31
CLN5-201ENST00000377453 Q5XG85 94 aa13.13□□□□□ -0.31
CLN5-201ENST00000377453 A0A0G2JQZ4 141 aa13.12□□□□□ -0.31
CLN5-201ENST00000377453 A0A1W2PNN7 141 aa13.12□□□□□ -0.31
CLN5-201ENST00000377453 KLKP1Q107X0 134 aa13.11□□□□□ -0.31
CLN5-201ENST00000377453 MGAM2Q2M2H8 2515 aa13.11□□□□□ -0.31
CLN5-201ENST00000377453 HRCT1Q6UXD1 115 aa13.11□□□□□ -0.31
CLN5-201ENST00000377453 Q6ZRX8 168 aa13.1□□□□□ -0.31
CLN5-201ENST00000377453 A0A1W2PNM2 257 aa13.09□□□□□ -0.31
CLN5-201ENST00000377453 BCE1O60756 84 aa13.09□□□□□ -0.31
CLN5-201ENST00000377453 ETDCA0A1B0GVM5 59 aa13.08□□□□□ -0.32
CLN5-201ENST00000377453 LYSTQ99698 3801 aa13.08□□□□□ -0.32
CLN5-201ENST00000377453 IGLV1-50A0A075B6I6 118 aa13.08□□□□□ -0.32
CLN5-201ENST00000377453 KRTAP4-16G5E9R7 235 aaPredicted RBP13.08□□□□□ -0.32
CLN5-201ENST00000377453 DNAH1Q9P2D7 4330 aa13.07□□□□□ -0.32
CLN5-201ENST00000377453 DNAH10Q8IVF4 4471 aa13.07□□□□□ -0.32
CLN5-201ENST00000377453 IGLV5-48A0A075B6I7 105 aa13.05□□□□□ -0.32
CLN5-201ENST00000377453 DNAH3Q8TD57 4116 aa13.04□□□□□ -0.32
CLN5-201ENST00000377453 C1orf137Q5JT78 98 aa13.04□□□□□ -0.32
CLN5-201ENST00000377453 TMEM254Q8TBM7 123 aa13.04□□□□□ -0.32
CLN5-201ENST00000377453 UBE2BP63146 152 aa13.03□□□□□ -0.32
CLN5-201ENST00000377453 CSMD3Q7Z407 3707 aa13.03□□□□□ -0.32
CLN5-201ENST00000377453 TLX1NBP0CAT3 122 aa13.02□□□□□ -0.32
CLN5-201ENST00000377453 MRPL55Q7Z7F7 128 aaKnown RBP13.01□□□□□ -0.33
CLN5-201ENST00000377453 FAM30AQ9NZY2 134 aa13.01□□□□□ -0.33
CLN5-201ENST00000377453 DHRS4-AS1Q9P1J3 65 aa13.01□□□□□ -0.33
CLN5-201ENST00000377453 HUWE1Q7Z6Z7 4374 aaKnown RBP13.01□□□□□ -0.33
CLN5-201ENST00000377453 C5orf47Q569G3 176 aa13□□□□□ -0.33
CLN5-201ENST00000377453 F8WDY8 70 aa13□□□□□ -0.33
CLN5-201ENST00000377453 PRYO14603 147 aa12.99□□□□□ -0.33
CLN5-201ENST00000377453 SPRR1AP35321 89 aa12.99□□□□□ -0.33
CLN5-201ENST00000377453 SMIM29Q86T20 159 aa12.99□□□□□ -0.33
CLN5-201ENST00000377453 OCR1Q9BZK8 76 aa12.99□□□□□ -0.33
CLN5-201ENST00000377453 FUSP35637 526 aaKnown RBP eCLIP12.99□□□□□ -0.33
CLN5-201ENST00000377453 IGKV2-24A0A0C4DH68 120 aa12.98□□□□□ -0.33
CLN5-201ENST00000377453 TNP2Q05952 138 aa12.98□□□□□ -0.33
CLN5-201ENST00000377453 SERP1Q9Y6X1 66 aa12.98□□□□□ -0.33
CLN5-201ENST00000377453 HIGD2AQ9BW72 106 aa12.98□□□□□ -0.33
CLN5-201ENST00000377453 PLA2G2DQ9UNK4 145 aa12.97□□□□□ -0.33
CLN5-201ENST00000377453 DEFB116Q30KQ4 102 aa12.95□□□□□ -0.34
CLN5-201ENST00000377453 PRLHP81277 87 aa12.95□□□□□ -0.34
CLN5-201ENST00000377453 LINC00474Q9P2X8 69 aa12.95□□□□□ -0.34
CLN5-201ENST00000377453 KRTAP1-5Q9BYS1 174 aa12.94□□□□□ -0.34
CLN5-201ENST00000377453 IGLV5-37A0A075B6J1 123 aa12.94□□□□□ -0.34
CLN5-201ENST00000377453 Q8NBF4 154 aa12.94□□□□□ -0.34
CLN5-201ENST00000377453 EPM2AB3EWF7 344 aa12.93□□□□□ -0.34
CLN5-201ENST00000377453 SRRM2Q9UQ35 2752 aaKnown RBP12.93□□□□□ -0.34
CLN5-201ENST00000377453 K7EQZ3 153 aa12.92□□□□□ -0.34
CLN5-201ENST00000377453 A0A096LNI7 61 aa12.91□□□□□ -0.34
CLN5-201ENST00000377453 REG3GQ6UW15 175 aa12.91□□□□□ -0.34
CLN5-201ENST00000377453 FP248Q71RG6 208 aaPredicted RBP12.91□□□□□ -0.34
CLN5-201ENST00000377453 A0A0U1RQV1 116 aa12.9□□□□□ -0.34
CLN5-201ENST00000377453 DSCR10P59022 87 aa12.9□□□□□ -0.34
CLN5-201ENST00000377453 LINC00476Q8WZB0 136 aa12.9□□□□□ -0.35
CLN5-201ENST00000377453 K7EIL1 84 aa12.89□□□□□ -0.35
CLN5-201ENST00000377453 DNAH9Q9NYC9 4486 aa12.89□□□□□ -0.35
CLN5-201ENST00000377453 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.89□□□□□ -0.35
CLN5-201ENST00000377453 FAM229BQ4G0N7 80 aa12.89□□□□□ -0.35
CLN5-201ENST00000377453 STAB2Q8WWQ8 2551 aa12.88□□□□□ -0.35
CLN5-201ENST00000377453 COL7A1Q02388 2944 aa12.87□□□□□ -0.35
CLN5-201ENST00000377453 CHTF8P0CG12 524 aa12.86□□□□□ -0.35
CLN5-201ENST00000377453 KRTAP11-1Q8IUC1 163 aa12.85□□□□□ -0.35
CLN5-201ENST00000377453 SPRR4Q96PI1 79 aa12.85□□□□□ -0.35
CLN5-201ENST00000377453 NDUFC1O43677 76 aa12.84□□□□□ -0.35
CLN5-201ENST00000377453 IGFL1Q6UW32 110 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms