RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 GAGE2AQ6NT46 116 aa11.96□□□□□ -0.49
VSX1-201ENST00000376707 Q6ZRX8 168 aa11.96□□□□□ -0.49
VSX1-201ENST00000376707 EIF4EBP3O60516 100 aaPredicted RBP11.95□□□□□ -0.5
VSX1-201ENST00000376707 SPINK1P00995 79 aa11.95□□□□□ -0.5
VSX1-201ENST00000376707 LINC01545Q5VT33 79 aa11.95□□□□□ -0.5
VSX1-201ENST00000376707 MUC17Q685J3 4493 aa11.94□□□□□ -0.5
VSX1-201ENST00000376707 ERC2-IT1O76042 136 aa11.94□□□□□ -0.5
VSX1-201ENST00000376707 S100A7L2Q5SY68 101 aa11.94□□□□□ -0.5
VSX1-201ENST00000376707 Q9BRP9 147 aa11.94□□□□□ -0.5
VSX1-201ENST00000376707 FAT4Q6V0I7 4981 aa11.93□□□□□ -0.5
VSX1-201ENST00000376707 PET117Q6UWS5 81 aa11.93□□□□□ -0.5
VSX1-201ENST00000376707 LCE2AQ5TA79 106 aaPredicted RBP11.92□□□□□ -0.5
VSX1-201ENST00000376707 TRAV23DV6A0A075B6W5 121 aa11.91□□□□□ -0.5
VSX1-201ENST00000376707 IGLV9-49A0A0B4J1Y8 123 aa11.91□□□□□ -0.5
VSX1-201ENST00000376707 NPC2P61916 151 aa11.91□□□□□ -0.5
VSX1-201ENST00000376707 MOBPQ13875 183 aa11.91□□□□□ -0.5
VSX1-201ENST00000376707 LITAFQ99732 161 aa11.91□□□□□ -0.5
VSX1-201ENST00000376707 TIMM17BO60830 172 aa11.9□□□□□ -0.5
VSX1-201ENST00000376707 KRTAP13-3Q3SY46 172 aa11.89□□□□□ -0.51
VSX1-201ENST00000376707 COA6Q5JTJ3 125 aaKnown RBP11.89□□□□□ -0.51
VSX1-201ENST00000376707 ZNF73O43830 326 aaPredicted RBP11.88□□□□□ -0.51
VSX1-201ENST00000376707 JOSD1Q15040 202 aaPredicted RBP11.88□□□□□ -0.51
VSX1-201ENST00000376707 SSBP3-AS1Q7Z2R9 100 aa11.88□□□□□ -0.51
VSX1-201ENST00000376707 LINC00308Q8TCZ7 52 aa11.87□□□□□ -0.51
VSX1-201ENST00000376707 SPANXCQ9NY87 97 aa11.87□□□□□ -0.51
VSX1-201ENST00000376707 C3orf79P0CE67 100 aa11.86□□□□□ -0.51
VSX1-201ENST00000376707 CBY1Q9Y3M2 126 aa11.86□□□□□ -0.51
VSX1-201ENST00000376707 ZNF815PA8K554 130 aa11.84□□□□□ -0.51
VSX1-201ENST00000376707 RPS29P62273 56 aaKnown RBP11.84□□□□□ -0.51
VSX1-201ENST00000376707 KRTAP9-2Q9BYQ4 174 aa11.84□□□□□ -0.51
VSX1-201ENST00000376707 C5orf52A6NGY3 159 aa11.82□□□□□ -0.52
VSX1-201ENST00000376707 LCE2BO14633 110 aa11.82□□□□□ -0.52
VSX1-201ENST00000376707 Q8N377 158 aa11.82□□□□□ -0.52
VSX1-201ENST00000376707 TTTY13Q9BZ97 58 aa11.81□□□□□ -0.52
VSX1-201ENST00000376707 HINT1P49773 126 aaPredicted RBP11.8□□□□□ -0.52
VSX1-201ENST00000376707 ASB16-AS1Q495Z4 193 aa11.8□□□□□ -0.52
VSX1-201ENST00000376707 C9orf153Q5TBE3 101 aa11.8□□□□□ -0.52
VSX1-201ENST00000376707 SLC25A20O43772 301 aa11.79□□□□□ -0.52
VSX1-201ENST00000376707 KRTDAPP60985 99 aa11.79□□□□□ -0.52
VSX1-201ENST00000376707 SPANXDQ9BXN6 97 aa11.79□□□□□ -0.52
VSX1-201ENST00000376707 ST20-AS1Q8NBB2 130 aa11.77□□□□□ -0.53
VSX1-201ENST00000376707 OR13C6PQ8NH95 151 aa11.77□□□□□ -0.53
VSX1-201ENST00000376707 LINC00518Q8N0U6 118 aa11.76□□□□□ -0.53
VSX1-201ENST00000376707 C20orf202A1L168 122 aa11.75□□□□□ -0.53
VSX1-201ENST00000376707 SEC61BP60468 96 aaKnown RBP11.75□□□□□ -0.53
VSX1-201ENST00000376707 DHRS4-AS1Q9P1J3 65 aa11.74□□□□□ -0.53
VSX1-201ENST00000376707 SPRR1BP22528 89 aa11.73□□□□□ -0.53
VSX1-201ENST00000376707 ANKRD39Q53RE8 183 aa11.73□□□□□ -0.53
VSX1-201ENST00000376707 SCGB1D4Q6XE38 83 aa11.72□□□□□ -0.53
VSX1-201ENST00000376707 ELOF1P60002 83 aaKnown RBP11.71□□□□□ -0.53
VSX1-201ENST00000376707 AKR1D1P51857 326 aa11.7□□□□□ -0.54
VSX1-201ENST00000376707 COPS9Q8WXC6 57 aa11.69□□□□□ -0.54
VSX1-201ENST00000376707 IFITM1P13164 125 aa11.68□□□□□ -0.54
VSX1-201ENST00000376707 COX7BP24311 80 aa11.68□□□□□ -0.54
VSX1-201ENST00000376707 C6orf99Q4VX62 202 aa11.68□□□□□ -0.54
VSX1-201ENST00000376707 SLC25A34Q6PIV7 304 aa11.68□□□□□ -0.54
VSX1-201ENST00000376707 Q6ZVH6 145 aa11.68□□□□□ -0.54
VSX1-201ENST00000376707 ATOH7Q8N100 152 aa11.68□□□□□ -0.54
VSX1-201ENST00000376707 TRBV7-6A0A0J9YX20 115 aa11.67□□□□□ -0.54
VSX1-201ENST00000376707 KRTAP4-1Q9BYQ7 146 aa11.67□□□□□ -0.54
VSX1-201ENST00000376707 LINC01547P58512 204 aaPredicted RBP11.66□□□□□ -0.54
VSX1-201ENST00000376707 PCP2Q8IVA1 136 aa11.66□□□□□ -0.54
VSX1-201ENST00000376707 XP32Q5T750 250 aa11.65□□□□□ -0.54
VSX1-201ENST00000376707 SNRPEP62304 92 aaKnown RBP11.63□□□□□ -0.55
VSX1-201ENST00000376707 LIMD2Q9BT23 127 aa11.63□□□□□ -0.55
VSX1-201ENST00000376707 LAMTOR3Q9UHA4 124 aa11.63□□□□□ -0.55
VSX1-201ENST00000376707 HRCT1Q6UXD1 115 aa11.62□□□□□ -0.55
VSX1-201ENST00000376707 MUSTN1Q8IVN3 82 aa11.61□□□□□ -0.55
VSX1-201ENST00000376707 A0A1B0GWB2 263 aa11.6□□□□□ -0.55
VSX1-201ENST00000376707 A6NDN8 102 aa11.59□□□□□ -0.55
VSX1-201ENST00000376707 HIST3H2BBQ8N257 126 aa11.59□□□□□ -0.55
VSX1-201ENST00000376707 TEX49A0A1B0GTD5 131 aa11.58□□□□□ -0.56
VSX1-201ENST00000376707 TAL2Q16559 108 aa11.58□□□□□ -0.56
VSX1-201ENST00000376707 DEFB105AQ8NG35 78 aa11.57□□□□□ -0.56
VSX1-201ENST00000376707 HIST1H2BLQ99880 126 aa11.57□□□□□ -0.56
VSX1-201ENST00000376707 IGLV5-48A0A075B6I7 105 aa11.55□□□□□ -0.56
VSX1-201ENST00000376707 TRAV13-2A0A0B4J235 113 aa11.55□□□□□ -0.56
VSX1-201ENST00000376707 A4D1N5 150 aa11.55□□□□□ -0.56
VSX1-201ENST00000376707 Q1RN00 199 aa11.55□□□□□ -0.56
VSX1-201ENST00000376707 CD164Q04900 197 aa11.54□□□□□ -0.56
VSX1-201ENST00000376707 S100A2P29034 98 aa11.53□□□□□ -0.56
VSX1-201ENST00000376707 SMIM29Q86T20 159 aa11.53□□□□□ -0.56
VSX1-201ENST00000376707 PRO1933Q9H354 126 aa11.52□□□□□ -0.57
VSX1-201ENST00000376707 KRTAP9-6A0A140TA67 174 aa11.51□□□□□ -0.57
VSX1-201ENST00000376707 SMIM11BQ8TCY0 68 aa11.51□□□□□ -0.57
VSX1-201ENST00000376707 C9orf92A6NGG3 77 aa11.5□□□□□ -0.57
VSX1-201ENST00000376707 S100A1P23297 94 aa11.5□□□□□ -0.57
VSX1-201ENST00000376707 HSBP1L1C9JCN9 74 aa11.49□□□□□ -0.57
VSX1-201ENST00000376707 NHP2Q9NX24 153 aaKnown RBP11.49□□□□□ -0.57
VSX1-201ENST00000376707 H7C2G1 150 aa11.48□□□□□ -0.57
VSX1-201ENST00000376707 Q5XG85 94 aa11.47□□□□□ -0.57
VSX1-201ENST00000376707 PCOTHQ58A44 107 aa11.46□□□□□ -0.57
VSX1-201ENST00000376707 S100A6P06703 90 aa11.44□□□□□ -0.58
VSX1-201ENST00000376707 IGLV8-61A0A075B6I0 122 aa11.43□□□□□ -0.58
VSX1-201ENST00000376707 VAMP3Q15836 100 aa11.42□□□□□ -0.58
VSX1-201ENST00000376707 LCE2CQ5TA81 110 aa11.4□□□□□ -0.58
VSX1-201ENST00000376707 LINC00575Q6W349 94 aa11.4□□□□□ -0.58
VSX1-201ENST00000376707 A0A0G2JQZ4 141 aa11.38□□□□□ -0.59
VSX1-201ENST00000376707 C1orf195Q5TG92 126 aa11.38□□□□□ -0.59
VSX1-201ENST00000376707 SCGB1D1O95968 90 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms