RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 FAM30AQ9NZY2 134 aa9.65□□□□□ -0.86
TNFRSF1B-201ENST00000376259 C2orf48Q96LS8 159 aa9.64□□□□□ -0.87
TNFRSF1B-201ENST00000376259 TM2D3Q9BRN9 247 aa9.64□□□□□ -0.87
TNFRSF1B-201ENST00000376259 PDE6GP18545 87 aa9.63□□□□□ -0.87
TNFRSF1B-201ENST00000376259 NDUFC2-KCTD14E9PQ53 114 aa9.63□□□□□ -0.87
TNFRSF1B-201ENST00000376259 A0A0G2JQZ4 141 aa9.62□□□□□ -0.87
TNFRSF1B-201ENST00000376259 A0A1W2PNN7 141 aa9.62□□□□□ -0.87
TNFRSF1B-201ENST00000376259 EGFEM1PQ0D2K5 195 aa9.62□□□□□ -0.87
TNFRSF1B-201ENST00000376259 SVIPQ8NHG7 77 aa9.61□□□□□ -0.87
TNFRSF1B-201ENST00000376259 TENM3Q9P273 2699 aa9.61□□□□□ -0.87
TNFRSF1B-201ENST00000376259 Q6ZRP5 223 aa9.61□□□□□ -0.87
TNFRSF1B-201ENST00000376259 TRAV7A0A075B6U4 112 aa9.6□□□□□ -0.87
TNFRSF1B-201ENST00000376259 FAM168BA1KXE4 195 aa9.6□□□□□ -0.87
TNFRSF1B-201ENST00000376259 WFDC13Q8IUB5 93 aa9.6□□□□□ -0.87
TNFRSF1B-201ENST00000376259 A0A0U1RQV1 116 aa9.59□□□□□ -0.87
TNFRSF1B-201ENST00000376259 IGLV6-57P01721 117 aa9.59□□□□□ -0.87
TNFRSF1B-201ENST00000376259 ST20-AS1Q8NBB2 130 aa9.59□□□□□ -0.87
TNFRSF1B-201ENST00000376259 LINC00612Q8N6U2 182 aa9.58□□□□□ -0.88
TNFRSF1B-201ENST00000376259 C7orf33Q8WU49 177 aa9.58□□□□□ -0.88
TNFRSF1B-201ENST00000376259 BRK1Q8WUW1 75 aa9.58□□□□□ -0.88
TNFRSF1B-201ENST00000376259 TRRAPQ9Y4A5 3859 aa9.57□□□□□ -0.88
TNFRSF1B-201ENST00000376259 C5orf47Q569G3 176 aa9.57□□□□□ -0.88
TNFRSF1B-201ENST00000376259 PKIGQ9Y2B9 76 aa9.57□□□□□ -0.88
TNFRSF1B-201ENST00000376259 VPREB1P12018 145 aa9.56□□□□□ -0.88
TNFRSF1B-201ENST00000376259 SERTAD4-AS1Q5TG53 156 aa9.56□□□□□ -0.88
TNFRSF1B-201ENST00000376259 KMT2BQ9UMN6 2715 aaPredicted RBP9.56□□□□□ -0.88
TNFRSF1B-201ENST00000376259 STAB2Q8WWQ8 2551 aa9.55□□□□□ -0.88
TNFRSF1B-201ENST00000376259 C1orf137Q5JT78 98 aa9.55□□□□□ -0.88
TNFRSF1B-201ENST00000376259 PRLHP81277 87 aa9.55□□□□□ -0.88
TNFRSF1B-201ENST00000376259 OBSCN-AS1Q96MR7 158 aa9.54□□□□□ -0.88
TNFRSF1B-201ENST00000376259 ELOF1P60002 83 aaKnown RBP9.54□□□□□ -0.88
TNFRSF1B-201ENST00000376259 TMEM254Q8TBM7 123 aa9.53□□□□□ -0.88
TNFRSF1B-201ENST00000376259 CASC10Q5T4H9 136 aa9.52□□□□□ -0.88
TNFRSF1B-201ENST00000376259 PRR34Q9NV39 138 aa9.52□□□□□ -0.89
TNFRSF1B-201ENST00000376259 C15orf56Q8N910 161 aa9.51□□□□□ -0.89
TNFRSF1B-201ENST00000376259 KRTAP10-11P60412 298 aa9.49□□□□□ -0.89
TNFRSF1B-201ENST00000376259 SMIM29Q86T20 159 aa9.49□□□□□ -0.89
TNFRSF1B-201ENST00000376259 LINC00167Q96N53 147 aa9.49□□□□□ -0.89
TNFRSF1B-201ENST00000376259 LOC110117498A0A087WWA1 95 aa9.48□□□□□ -0.89
TNFRSF1B-201ENST00000376259 LINC00474Q9P2X8 69 aa9.48□□□□□ -0.89
TNFRSF1B-201ENST00000376259 H3BQ85 93 aa9.48□□□□□ -0.89
TNFRSF1B-201ENST00000376259 H0Y9J4 135 aa9.47□□□□□ -0.89
TNFRSF1B-201ENST00000376259 A0A087WSZ3 146 aa9.46□□□□□ -0.89
TNFRSF1B-201ENST00000376259 UBE2AP49459 152 aa9.46□□□□□ -0.89
TNFRSF1B-201ENST00000376259 LINC00528Q8N1L1 170 aa9.46□□□□□ -0.9
TNFRSF1B-201ENST00000376259 CXCL6P80162 114 aa9.45□□□□□ -0.9
TNFRSF1B-201ENST00000376259 NDUFS5O43920 106 aa9.44□□□□□ -0.9
TNFRSF1B-201ENST00000376259 OXTP01178 125 aa9.44□□□□□ -0.9
TNFRSF1B-201ENST00000376259 TRBV7-6A0A0J9YX20 115 aa9.44□□□□□ -0.9
TNFRSF1B-201ENST00000376259 H7BZZ5 65 aa9.44□□□□□ -0.9
TNFRSF1B-201ENST00000376259 MRPL55Q7Z7F7 128 aaKnown RBP9.44□□□□□ -0.9
TNFRSF1B-201ENST00000376259 DHRS4-AS1Q9P1J3 65 aa9.43□□□□□ -0.9
TNFRSF1B-201ENST00000376259 SERP1Q9Y6X1 66 aa9.43□□□□□ -0.9
TNFRSF1B-201ENST00000376259 PRYO14603 147 aa9.43□□□□□ -0.9
TNFRSF1B-201ENST00000376259 Q8N377 158 aa9.42□□□□□ -0.9
TNFRSF1B-201ENST00000376259 TRBV7-4A0A0J9YYF1 115 aa9.42□□□□□ -0.9
TNFRSF1B-201ENST00000376259 LINC01556Q5JQF7 62 aa9.42□□□□□ -0.9
TNFRSF1B-201ENST00000376259 ERC2-IT1O76042 136 aa9.42□□□□□ -0.9
TNFRSF1B-201ENST00000376259 CHTF8P0CG12 524 aa9.42□□□□□ -0.9
TNFRSF1B-201ENST00000376259 KRTAP24-1Q3LI83 254 aa9.42□□□□□ -0.9
TNFRSF1B-201ENST00000376259 LINC00588Q9Y4M8 146 aa9.42□□□□□ -0.9
TNFRSF1B-201ENST00000376259 GVQW2A0A096LPI5 108 aaPredicted RBP9.41□□□□□ -0.9
TNFRSF1B-201ENST00000376259 RPL37AP61513 92 aaKnown RBP9.41□□□□□ -0.9
TNFRSF1B-201ENST00000376259 RPS28P62857 69 aaKnown RBP9.4□□□□□ -0.9
TNFRSF1B-201ENST00000376259 SMIM26A0A096LP01 95 aa9.39□□□□□ -0.91
TNFRSF1B-201ENST00000376259 REG3GQ6UW15 175 aa9.39□□□□□ -0.91
TNFRSF1B-201ENST00000376259 LINC00208Q96KT6 92 aa9.38□□□□□ -0.91
TNFRSF1B-201ENST00000376259 IGLV9-49A0A0B4J1Y8 123 aa9.38□□□□□ -0.91
TNFRSF1B-201ENST00000376259 MP68P56378 58 aa9.38□□□□□ -0.91
TNFRSF1B-201ENST00000376259 Q6ZRX8 168 aa9.38□□□□□ -0.91
TNFRSF1B-201ENST00000376259 PSPHP1O15172 72 aa9.37□□□□□ -0.91
TNFRSF1B-201ENST00000376259 K7EQZ3 153 aa9.36□□□□□ -0.91
TNFRSF1B-201ENST00000376259 TENM2Q9NT68 2774 aa9.35□□□□□ -0.91
TNFRSF1B-201ENST00000376259 NDUFC1O43677 76 aa9.35□□□□□ -0.91
TNFRSF1B-201ENST00000376259 IGKV4-1P06312 121 aa9.34□□□□□ -0.91
TNFRSF1B-201ENST00000376259 LINC00476Q8WZB0 136 aa9.34□□□□□ -0.91
TNFRSF1B-201ENST00000376259 A0A1W2PNM2 257 aa9.34□□□□□ -0.91
TNFRSF1B-201ENST00000376259 Q9BRP9 147 aa9.33□□□□□ -0.92
TNFRSF1B-201ENST00000376259 LINC00336Q6ZUF6 198 aa9.33□□□□□ -0.92
TNFRSF1B-201ENST00000376259 PHF5AQ7RTV0 110 aaKnown RBP9.33□□□□□ -0.92
TNFRSF1B-201ENST00000376259 CDK2AP2O75956 126 aa9.32□□□□□ -0.92
TNFRSF1B-201ENST00000376259 Q8NBF4 154 aa9.32□□□□□ -0.92
TNFRSF1B-201ENST00000376259 SPINK6Q6UWN8 80 aa9.31□□□□□ -0.92
TNFRSF1B-201ENST00000376259 KCNQ1DNQ9H478 68 aa9.31□□□□□ -0.92
TNFRSF1B-201ENST00000376259 KLKP1Q107X0 134 aa9.31□□□□□ -0.92
TNFRSF1B-201ENST00000376259 IGLV1-50A0A075B6I6 118 aa9.29□□□□□ -0.92
TNFRSF1B-201ENST00000376259 PCOTHQ58A44 107 aa9.27□□□□□ -0.93
TNFRSF1B-201ENST00000376259 HCG22E2RYF7 251 aa9.27□□□□□ -0.93
TNFRSF1B-201ENST00000376259 ANK3Q12955 4377 aaKnown RBP9.26□□□□□ -0.93
TNFRSF1B-201ENST00000376259 DNAH10OSP0CZ25 163 aa9.26□□□□□ -0.93
TNFRSF1B-201ENST00000376259 H3BNG1 76 aa9.26□□□□□ -0.93
TNFRSF1B-201ENST00000376259 NDUFB1O75438 58 aa9.25□□□□□ -0.93
TNFRSF1B-201ENST00000376259 B9D2Q9BPU9 175 aa9.25□□□□□ -0.93
TNFRSF1B-201ENST00000376259 Q5XG85 94 aa9.25□□□□□ -0.93
TNFRSF1B-201ENST00000376259 SPTSSBQ8NFR3 76 aa9.24□□□□□ -0.93
TNFRSF1B-201ENST00000376259 KRTAP26-1Q6PEX3 210 aa9.24□□□□□ -0.93
TNFRSF1B-201ENST00000376259 CASC2Q6XLA1 102 aa9.23□□□□□ -0.93
TNFRSF1B-201ENST00000376259 FAM229BQ4G0N7 80 aa9.22□□□□□ -0.93
TNFRSF1B-201ENST00000376259 IGFL1Q6UW32 110 aa9.22□□□□□ -0.93
TNFRSF1B-201ENST00000376259 EPM2AB3EWF7 344 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms