RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 Q6ZVQ6 151 aa9.26□□□□□ -0.93
MSH5-202ENST00000375740 RBM3P98179 157 aaKnown RBP9.25□□□□□ -0.93
MSH5-202ENST00000375740 SCXQ7RTU7 201 aa9.25□□□□□ -0.93
MSH5-202ENST00000375740 TM2D3Q9BRN9 247 aa9.25□□□□□ -0.93
MSH5-202ENST00000375740 NOTCH1P46531 2555 aa9.25□□□□□ -0.93
MSH5-202ENST00000375740 COL6A5A8TX70 2615 aa9.25□□□□□ -0.93
MSH5-202ENST00000375740 IGKV2D-24A0A075B6R9 120 aa9.25□□□□□ -0.93
MSH5-202ENST00000375740 Q6ZRU5 148 aa9.24□□□□□ -0.93
MSH5-202ENST00000375740 LAMTOR3Q9UHA4 124 aa9.24□□□□□ -0.93
MSH5-202ENST00000375740 IGLV6-57P01721 117 aa9.23□□□□□ -0.93
MSH5-202ENST00000375740 SMIM26A0A096LP01 95 aa9.22□□□□□ -0.93
MSH5-202ENST00000375740 DNAH10OSP0CZ25 163 aa9.22□□□□□ -0.93
MSH5-202ENST00000375740 TRBV7-6A0A0J9YX20 115 aa9.22□□□□□ -0.93
MSH5-202ENST00000375740 LINC00575Q6W349 94 aa9.22□□□□□ -0.93
MSH5-202ENST00000375740 LINC00588Q9Y4M8 146 aa9.21□□□□□ -0.93
MSH5-202ENST00000375740 FAM229BQ4G0N7 80 aa9.19□□□□□ -0.94
MSH5-202ENST00000375740 A0A0U1RQV1 116 aa9.19□□□□□ -0.94
MSH5-202ENST00000375740 LOC110117498A0A087WWA1 95 aa9.18□□□□□ -0.94
MSH5-202ENST00000375740 BCE1O60756 84 aa9.18□□□□□ -0.94
MSH5-202ENST00000375740 VPREB1P12018 145 aa9.18□□□□□ -0.94
MSH5-202ENST00000375740 BRK1Q8WUW1 75 aa9.18□□□□□ -0.94
MSH5-202ENST00000375740 TRBV7-4A0A0J9YYF1 115 aa9.17□□□□□ -0.94
MSH5-202ENST00000375740 Q6ZQY7 126 aa9.17□□□□□ -0.94
MSH5-202ENST00000375740 NBEAL1Q6ZS30 2694 aa9.17□□□□□ -0.94
MSH5-202ENST00000375740 SYCNQ0VAF6 134 aa9.17□□□□□ -0.94
MSH5-202ENST00000375740 Q6ZRP5 223 aa9.16□□□□□ -0.94
MSH5-202ENST00000375740 MPLKIPQ8TAP9 179 aa9.16□□□□□ -0.94
MSH5-202ENST00000375740 F8WDY8 70 aa9.15□□□□□ -0.94
MSH5-202ENST00000375740 Q8N9L7 120 aa9.15□□□□□ -0.95
MSH5-202ENST00000375740 DIRC1Q969H9 104 aa9.14□□□□□ -0.95
MSH5-202ENST00000375740 M0R378 163 aa9.14□□□□□ -0.95
MSH5-202ENST00000375740 ZNF73O43830 326 aaPredicted RBP9.13□□□□□ -0.95
MSH5-202ENST00000375740 CXCL6P80162 114 aa9.13□□□□□ -0.95
MSH5-202ENST00000375740 CASC10Q5T4H9 136 aa9.13□□□□□ -0.95
MSH5-202ENST00000375740 NREPQ16612 68 aa9.12□□□□□ -0.95
MSH5-202ENST00000375740 TMEM254Q8TBM7 123 aa9.11□□□□□ -0.95
MSH5-202ENST00000375740 COX7BP24311 80 aa9.1□□□□□ -0.95
MSH5-202ENST00000375740 HUWE1Q7Z6Z7 4374 aaKnown RBP9.09□□□□□ -0.95
MSH5-202ENST00000375740 BPY2O14599 106 aa9.09□□□□□ -0.95
MSH5-202ENST00000375740 ELOF1P60002 83 aaKnown RBP9.08□□□□□ -0.96
MSH5-202ENST00000375740 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.08□□□□□ -0.96
MSH5-202ENST00000375740 MDFIQ99750 246 aa9.08□□□□□ -0.96
MSH5-202ENST00000375740 NDUFC1O43677 76 aa9.08□□□□□ -0.96
MSH5-202ENST00000375740 SERTAD4-AS1Q5TG53 156 aa9.07□□□□□ -0.96
MSH5-202ENST00000375740 MGAM2Q2M2H8 2515 aa9.06□□□□□ -0.96
MSH5-202ENST00000375740 TLX1NBP0CAT3 122 aa9.06□□□□□ -0.96
MSH5-202ENST00000375740 C1orf195Q5TG92 126 aa9.06□□□□□ -0.96
MSH5-202ENST00000375740 NKAPP1Q8N9T2 125 aa9.05□□□□□ -0.96
MSH5-202ENST00000375740 PDE6GP18545 87 aa9.04□□□□□ -0.96
MSH5-202ENST00000375740 LINC00528Q8N1L1 170 aa9.04□□□□□ -0.96
MSH5-202ENST00000375740 C7orf33Q8WU49 177 aa9.04□□□□□ -0.96
MSH5-202ENST00000375740 HIGD2AQ9BW72 106 aa9.03□□□□□ -0.96
MSH5-202ENST00000375740 H3BQ85 93 aa9.03□□□□□ -0.96
MSH5-202ENST00000375740 LRCOL1A6NCL2 159 aa9.02□□□□□ -0.97
MSH5-202ENST00000375740 FAM168BA1KXE4 195 aa9.02□□□□□ -0.97
MSH5-202ENST00000375740 IGKV4-1P06312 121 aa9.02□□□□□ -0.97
MSH5-202ENST00000375740 ATP5EP56381 51 aaPredicted RBP9.02□□□□□ -0.97
MSH5-202ENST00000375740 OCR1Q9BZK8 76 aa9.02□□□□□ -0.97
MSH5-202ENST00000375740 PRYO14603 147 aa9.01□□□□□ -0.97
MSH5-202ENST00000375740 KCNQ1DNQ9H478 68 aa9.01□□□□□ -0.97
MSH5-202ENST00000375740 PLA2G2DQ9UNK4 145 aa9.01□□□□□ -0.97
MSH5-202ENST00000375740 COL7A1Q02388 2944 aa9□□□□□ -0.97
MSH5-202ENST00000375740 KRTAP1-5Q9BYS1 174 aa9□□□□□ -0.97
MSH5-202ENST00000375740 V9GYY9 64 aa8.99□□□□□ -0.97
MSH5-202ENST00000375740 FUSP35637 526 aaKnown RBP eCLIP8.99□□□□□ -0.97
MSH5-202ENST00000375740 APLNQ9ULZ1 77 aa8.99□□□□□ -0.97
MSH5-202ENST00000375740 RPL37AP8A6NKH3 93 aa8.98□□□□□ -0.97
MSH5-202ENST00000375740 SEC61GP60059 68 aa8.98□□□□□ -0.97
MSH5-202ENST00000375740 B9D2Q9BPU9 175 aa8.98□□□□□ -0.97
MSH5-202ENST00000375740 KRTAP7-1Q8IUC3 87 aa8.98□□□□□ -0.97
MSH5-202ENST00000375740 UBE2DNLQ8IWF7 75 aa8.98□□□□□ -0.97
MSH5-202ENST00000375740 IGLV5-37A0A075B6J1 123 aa8.97□□□□□ -0.97
MSH5-202ENST00000375740 C3orf84H3BNL1 204 aa8.97□□□□□ -0.97
MSH5-202ENST00000375740 ERC2-IT1O76042 136 aa8.97□□□□□ -0.97
MSH5-202ENST00000375740 DNAH1Q9P2D7 4330 aa8.96□□□□□ -0.97
MSH5-202ENST00000375740 IGLV1-50A0A075B6I6 118 aa8.96□□□□□ -0.98
MSH5-202ENST00000375740 STAB2Q8WWQ8 2551 aa8.95□□□□□ -0.98
MSH5-202ENST00000375740 FAM30AQ9NZY2 134 aa8.94□□□□□ -0.98
MSH5-202ENST00000375740 PSCAO43653 123 aa8.93□□□□□ -0.98
MSH5-202ENST00000375740 KRTAP4-16G5E9R7 235 aaPredicted RBP8.92□□□□□ -0.98
MSH5-202ENST00000375740 MRPL55Q7Z7F7 128 aaKnown RBP8.92□□□□□ -0.98
MSH5-202ENST00000375740 DEFB105AQ8NG35 78 aa8.92□□□□□ -0.98
MSH5-202ENST00000375740 SPRR1AP35321 89 aa8.91□□□□□ -0.98
MSH5-202ENST00000375740 SMIM29Q86T20 159 aa8.91□□□□□ -0.98
MSH5-202ENST00000375740 DNAH9Q9NYC9 4486 aa8.91□□□□□ -0.98
MSH5-202ENST00000375740 Q6ZRX8 168 aa8.91□□□□□ -0.98
MSH5-202ENST00000375740 ETDCA0A1B0GVM5 59 aa8.9□□□□□ -0.98
MSH5-202ENST00000375740 Q9BRP9 147 aa8.9□□□□□ -0.98
MSH5-202ENST00000375740 hDV103S1A0JD37 113 aa8.89□□□□□ -0.99
MSH5-202ENST00000375740 Q8N377 158 aa8.89□□□□□ -0.99
MSH5-202ENST00000375740 DHRS4-AS1Q9P1J3 65 aa8.89□□□□□ -0.99
MSH5-202ENST00000375740 A0A096LNI7 61 aa8.88□□□□□ -0.99
MSH5-202ENST00000375740 CNBPP62633 177 aaKnown RBP8.88□□□□□ -0.99
MSH5-202ENST00000375740 LYSTQ99698 3801 aa8.88□□□□□ -0.99
MSH5-202ENST00000375740 C1orf64Q8NEQ6 169 aa8.87□□□□□ -0.99
MSH5-202ENST00000375740 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.87□□□□□ -0.99
MSH5-202ENST00000375740 IGKV2-24A0A0C4DH68 120 aa8.87□□□□□ -0.99
MSH5-202ENST00000375740 PSPHP1O15172 72 aa8.87□□□□□ -0.99
MSH5-202ENST00000375740 PRR4Q16378 134 aa8.87□□□□□ -0.99
MSH5-202ENST00000375740 C16orf90A8MZG2 172 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms