RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 MOBPQ13875 183 aa7.69□□□□□ -1.18
PTCH1-203ENST00000375274 SERTAD4-AS1Q5TG53 156 aa7.68□□□□□ -1.18
PTCH1-203ENST00000375274 EPM2AB3EWF7 344 aa7.68□□□□□ -1.18
PTCH1-203ENST00000375274 C16orf90A8MZG2 172 aa7.68□□□□□ -1.18
PTCH1-203ENST00000375274 K7EQZ3 153 aa7.68□□□□□ -1.18
PTCH1-203ENST00000375274 LINC00612Q8N6U2 182 aa7.68□□□□□ -1.18
PTCH1-203ENST00000375274 SPINK1P00995 79 aa7.67□□□□□ -1.18
PTCH1-203ENST00000375274 DNAH10OSP0CZ25 163 aa7.67□□□□□ -1.18
PTCH1-203ENST00000375274 RPL37AP61513 92 aaKnown RBP7.67□□□□□ -1.18
PTCH1-203ENST00000375274 C1orf134Q5TEV5 83 aa7.67□□□□□ -1.18
PTCH1-203ENST00000375274 LINC01600Q96MT4 127 aa7.67□□□□□ -1.18
PTCH1-203ENST00000375274 FAM168BA1KXE4 195 aa7.66□□□□□ -1.18
PTCH1-203ENST00000375274 H7BZZ5 65 aa7.66□□□□□ -1.18
PTCH1-203ENST00000375274 MDFIQ99750 246 aa7.65□□□□□ -1.18
PTCH1-203ENST00000375274 HELZ2Q9BYK8 2649 aaKnown RBP7.65□□□□□ -1.19
PTCH1-203ENST00000375274 SPAG11AQ6PDA7 123 aa7.65□□□□□ -1.19
PTCH1-203ENST00000375274 IGLV1-50A0A075B6I6 118 aa7.64□□□□□ -1.19
PTCH1-203ENST00000375274 CHTF8P0CG12 524 aa7.64□□□□□ -1.19
PTCH1-203ENST00000375274 IGKV2D-30A0A075B6S6 120 aa7.63□□□□□ -1.19
PTCH1-203ENST00000375274 IGKV2-30P06310 120 aa7.63□□□□□ -1.19
PTCH1-203ENST00000375274 Q8N377 158 aa7.63□□□□□ -1.19
PTCH1-203ENST00000375274 KRTAP24-1Q3LI83 254 aa7.63□□□□□ -1.19
PTCH1-203ENST00000375274 C15orf56Q8N910 161 aa7.63□□□□□ -1.19
PTCH1-203ENST00000375274 FAM104AQ969W3 186 aa7.62□□□□□ -1.19
PTCH1-203ENST00000375274 FRYQ5TBA9 3013 aa7.61□□□□□ -1.19
PTCH1-203ENST00000375274 ACYP2P14621 99 aa7.61□□□□□ -1.19
PTCH1-203ENST00000375274 DSPP15924 2871 aaKnown RBP7.6□□□□□ -1.19
PTCH1-203ENST00000375274 A8MWP4 228 aa7.6□□□□□ -1.19
PTCH1-203ENST00000375274 A0A1B0GU69 56 aa7.6□□□□□ -1.19
PTCH1-203ENST00000375274 OBSCN-AS1Q96MR7 158 aa7.59□□□□□ -1.19
PTCH1-203ENST00000375274 A8MUN3 132 aa7.59□□□□□ -1.19
PTCH1-203ENST00000375274 IGFL1Q6UW32 110 aa7.59□□□□□ -1.19
PTCH1-203ENST00000375274 LINC00336Q6ZUF6 198 aa7.58□□□□□ -1.2
PTCH1-203ENST00000375274 FREM2Q5SZK8 3169 aa7.58□□□□□ -1.2
PTCH1-203ENST00000375274 NBDYA0A0U1RRE5 68 aa7.58□□□□□ -1.2
PTCH1-203ENST00000375274 SPACA4Q8TDM5 124 aa7.57□□□□□ -1.2
PTCH1-203ENST00000375274 GCN1Q92616 2671 aaKnown RBP7.57□□□□□ -1.2
PTCH1-203ENST00000375274 NBEAQ8NFP9 2946 aa7.56□□□□□ -1.2
PTCH1-203ENST00000375274 KRTAP10-3P60369 221 aa7.55□□□□□ -1.2
PTCH1-203ENST00000375274 PRR15Q8IV56 129 aa7.55□□□□□ -1.2
PTCH1-203ENST00000375274 UNC79Q9P2D8 2635 aa7.54□□□□□ -1.2
PTCH1-203ENST00000375274 A0A0G2JQZ4 141 aa7.54□□□□□ -1.2
PTCH1-203ENST00000375274 A0A1W2PNN7 141 aa7.54□□□□□ -1.2
PTCH1-203ENST00000375274 C7orf65Q6ZTY9 151 aa7.54□□□□□ -1.2
PTCH1-203ENST00000375274 A0A1W2PNM2 257 aa7.53□□□□□ -1.2
PTCH1-203ENST00000375274 TLX1NBP0CAT3 122 aa7.53□□□□□ -1.2
PTCH1-203ENST00000375274 RTL8CO15255 209 aa7.53□□□□□ -1.2
PTCH1-203ENST00000375274 COA5Q86WW8 74 aa7.53□□□□□ -1.2
PTCH1-203ENST00000375274 CDH23Q9H251 3354 aa7.52□□□□□ -1.2
PTCH1-203ENST00000375274 LOC101927531A0A1B0GV80 90 aa7.52□□□□□ -1.21
PTCH1-203ENST00000375274 MRPL34Q9BQ48 92 aaKnown RBP7.52□□□□□ -1.21
PTCH1-203ENST00000375274 PLA2G2DQ9UNK4 145 aa7.52□□□□□ -1.21
PTCH1-203ENST00000375274 TEX15Q9BXT5 2789 aa7.52□□□□□ -1.21
PTCH1-203ENST00000375274 LINC00313P59037 77 aa7.52□□□□□ -1.21
PTCH1-203ENST00000375274 CR1P17927 2039 aa7.51□□□□□ -1.21
PTCH1-203ENST00000375274 NOTCH1P46531 2555 aa7.51□□□□□ -1.21
PTCH1-203ENST00000375274 CELSR3Q9NYQ7 3312 aa7.51□□□□□ -1.21
PTCH1-203ENST00000375274 CYP4F30PQ9H0H9 118 aa7.5□□□□□ -1.21
PTCH1-203ENST00000375274 KRTAP10-11P60412 298 aa7.5□□□□□ -1.21
PTCH1-203ENST00000375274 KRTAP1-3Q8IUG1 177 aa7.5□□□□□ -1.21
PTCH1-203ENST00000375274 IGLV5-48A0A075B6I7 105 aa7.49□□□□□ -1.21
PTCH1-203ENST00000375274 ATP11AUNQ6ZP68 121 aa7.49□□□□□ -1.21
PTCH1-203ENST00000375274 TEP1Q99973 2627 aaKnown RBP7.48□□□□□ -1.21
PTCH1-203ENST00000375274 LAMA1P25391 3075 aa7.47□□□□□ -1.21
PTCH1-203ENST00000375274 FAM229AH3BQW9 127 aa7.47□□□□□ -1.21
PTCH1-203ENST00000375274 C8orf17Q9NRJ1 99 aa7.47□□□□□ -1.21
PTCH1-203ENST00000375274 NBEAL2Q6ZNJ1 2754 aa7.46□□□□□ -1.21
PTCH1-203ENST00000375274 STAB1Q9NY15 2570 aa7.46□□□□□ -1.22
PTCH1-203ENST00000375274 CASC10Q5T4H9 136 aa7.45□□□□□ -1.22
PTCH1-203ENST00000375274 C8orf87E5RJ46 101 aa7.45□□□□□ -1.22
PTCH1-203ENST00000375274 C9orf163Q8N9P6 203 aa7.45□□□□□ -1.22
PTCH1-203ENST00000375274 OCR1Q9BZK8 76 aa7.45□□□□□ -1.22
PTCH1-203ENST00000375274 KRTAP1-1Q07627 177 aa7.44□□□□□ -1.22
PTCH1-203ENST00000375274 VCANP13611 3396 aa7.44□□□□□ -1.22
PTCH1-203ENST00000375274 K7EIL1 84 aa7.44□□□□□ -1.22
PTCH1-203ENST00000375274 NBEAL1Q6ZS30 2694 aa7.44□□□□□ -1.22
PTCH1-203ENST00000375274 IGLV8-61A0A075B6I0 122 aa7.43□□□□□ -1.22
PTCH1-203ENST00000375274 A0A1B0GVX0 72 aa7.43□□□□□ -1.22
PTCH1-203ENST00000375274 KALRNO60229 2985 aa7.42□□□□□ -1.22
PTCH1-203ENST00000375274 TYMSOSQ8TAI1 123 aa7.42□□□□□ -1.22
PTCH1-203ENST00000375274 UBR5O95071 2799 aaPredicted RBP7.41□□□□□ -1.22
PTCH1-203ENST00000375274 TNRC18O15417 2968 aaPredicted RBP7.41□□□□□ -1.22
PTCH1-203ENST00000375274 ZNF861PO60384 105 aa7.4□□□□□ -1.22
PTCH1-203ENST00000375274 COL6A5A8TX70 2615 aa7.4□□□□□ -1.23
PTCH1-203ENST00000375274 IGLV5-37A0A075B6J1 123 aa7.39□□□□□ -1.23
PTCH1-203ENST00000375274 Q8NDZ9 215 aa7.39□□□□□ -1.23
PTCH1-203ENST00000375274 SPANXA2-OT1Q8N9U9 137 aa7.38□□□□□ -1.23
PTCH1-203ENST00000375274 Q96NJ1 140 aa7.38□□□□□ -1.23
PTCH1-203ENST00000375274 CYSTM1Q9H1C7 97 aa7.38□□□□□ -1.23
PTCH1-203ENST00000375274 SSBP3-AS1Q7Z2R9 100 aa7.38□□□□□ -1.23
PTCH1-203ENST00000375274 UQCR11O14957 56 aa7.37□□□□□ -1.23
PTCH1-203ENST00000375274 CNBPP62633 177 aaKnown RBP7.37□□□□□ -1.23
PTCH1-203ENST00000375274 DSCR10P59022 87 aa7.37□□□□□ -1.23
PTCH1-203ENST00000375274 SPRR4Q96PI1 79 aa7.37□□□□□ -1.23
PTCH1-203ENST00000375274 ADGRG4Q8IZF6 3080 aa7.36□□□□□ -1.23
PTCH1-203ENST00000375274 ANAPC11Q9NYG5 84 aa7.36□□□□□ -1.23
PTCH1-203ENST00000375274 SETXQ7Z333 2677 aaKnown RBP7.35□□□□□ -1.23
PTCH1-203ENST00000375274 DNAH14Q0VDD8 3507 aa7.35□□□□□ -1.23
PTCH1-203ENST00000375274 A0A087WTM6 91 aa7.34□□□□□ -1.23
PTCH1-203ENST00000375274 PLA2G1BP04054 148 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms