RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 SS18L2Q9UHA2 77 aa8.03□□□□□ -1.12
UBR4-203ENST00000375225 LINC00588Q9Y4M8 146 aa8.03□□□□□ -1.12
UBR4-203ENST00000375225 HUWE1Q7Z6Z7 4374 aaKnown RBP8.03□□□□□ -1.12
UBR4-203ENST00000375225 BCE1O60756 84 aa8.03□□□□□ -1.12
UBR4-203ENST00000375225 DHRS4-AS1Q9P1J3 65 aa8.03□□□□□ -1.12
UBR4-203ENST00000375225 IGLV5-37A0A075B6J1 123 aa8.02□□□□□ -1.13
UBR4-203ENST00000375225 PRYO14603 147 aa8.02□□□□□ -1.13
UBR4-203ENST00000375225 SERP2Q8N6R1 65 aa8.02□□□□□ -1.13
UBR4-203ENST00000375225 TRBV7-4A0A0J9YYF1 115 aa8.01□□□□□ -1.13
UBR4-203ENST00000375225 USP17L23D6RBM5 183 aa8.01□□□□□ -1.13
UBR4-203ENST00000375225 CXCL6P80162 114 aa8.01□□□□□ -1.13
UBR4-203ENST00000375225 CRYGAP11844 174 aa8□□□□□ -1.13
UBR4-203ENST00000375225 SMIM20Q8N5G0 67 aa8□□□□□ -1.13
UBR4-203ENST00000375225 LOC107984640A0A0U1RRK4 108 aa7.99□□□□□ -1.13
UBR4-203ENST00000375225 DNAH9Q9NYC9 4486 aa7.99□□□□□ -1.13
UBR4-203ENST00000375225 NUPR2A6NF83 97 aa7.98□□□□□ -1.13
UBR4-203ENST00000375225 C7orf33Q8WU49 177 aa7.98□□□□□ -1.13
UBR4-203ENST00000375225 ETDCA0A1B0GVM5 59 aa7.98□□□□□ -1.13
UBR4-203ENST00000375225 A0A1B0GW54 56 aa7.98□□□□□ -1.13
UBR4-203ENST00000375225 Q6ZVQ6 151 aa7.98□□□□□ -1.13
UBR4-203ENST00000375225 HAMPP81172 84 aa7.97□□□□□ -1.13
UBR4-203ENST00000375225 PKIGQ9Y2B9 76 aa7.97□□□□□ -1.13
UBR4-203ENST00000375225 A0A087WVE0 104 aa7.96□□□□□ -1.14
UBR4-203ENST00000375225 LINC01547P58512 204 aaPredicted RBP7.96□□□□□ -1.14
UBR4-203ENST00000375225 COL7A1Q02388 2944 aa7.94□□□□□ -1.14
UBR4-203ENST00000375225 C14orf177Q52M58 125 aa7.94□□□□□ -1.14
UBR4-203ENST00000375225 SERTAD4-AS1Q5TG53 156 aa7.94□□□□□ -1.14
UBR4-203ENST00000375225 STAB2Q8WWQ8 2551 aa7.94□□□□□ -1.14
UBR4-203ENST00000375225 MEGF8Q7Z7M0 2845 aa7.94□□□□□ -1.14
UBR4-203ENST00000375225 IGLV1-50A0A075B6I6 118 aa7.93□□□□□ -1.14
UBR4-203ENST00000375225 Q6ZRX8 168 aa7.93□□□□□ -1.14
UBR4-203ENST00000375225 FAM19A1Q7Z5A9 133 aa7.93□□□□□ -1.14
UBR4-203ENST00000375225 MRPL55Q7Z7F7 128 aaKnown RBP7.93□□□□□ -1.14
UBR4-203ENST00000375225 UBE2DNLQ8IWF7 75 aa7.93□□□□□ -1.14
UBR4-203ENST00000375225 APLNQ9ULZ1 77 aa7.93□□□□□ -1.14
UBR4-203ENST00000375225 SPRR1AP35321 89 aa7.92□□□□□ -1.14
UBR4-203ENST00000375225 FUSP35637 526 aaKnown RBP eCLIP7.92□□□□□ -1.14
UBR4-203ENST00000375225 PSCAO43653 123 aa7.91□□□□□ -1.14
UBR4-203ENST00000375225 TMEM258P61165 79 aa7.9□□□□□ -1.14
UBR4-203ENST00000375225 NREPQ16612 68 aa7.9□□□□□ -1.14
UBR4-203ENST00000375225 IGLV5-48A0A075B6I7 105 aa7.89□□□□□ -1.15
UBR4-203ENST00000375225 TRAV7A0A075B6U4 112 aa7.89□□□□□ -1.15
UBR4-203ENST00000375225 DEFB105AQ8NG35 78 aa7.89□□□□□ -1.15
UBR4-203ENST00000375225 RPL37AP8A6NKH3 93 aa7.88□□□□□ -1.15
UBR4-203ENST00000375225 REG3GQ6UW15 175 aa7.88□□□□□ -1.15
UBR4-203ENST00000375225 FAM19A5Q7Z5A7 132 aaPredicted RBP7.88□□□□□ -1.15
UBR4-203ENST00000375225 Q8N377 158 aa7.88□□□□□ -1.15
UBR4-203ENST00000375225 M0R2N4 97 aa7.88□□□□□ -1.15
UBR4-203ENST00000375225 CNBPP62633 177 aaKnown RBP7.88□□□□□ -1.15
UBR4-203ENST00000375225 PRKDCP78527 4128 aaKnown RBP7.87□□□□□ -1.15
UBR4-203ENST00000375225 KRTAP4-16G5E9R7 235 aaPredicted RBP7.87□□□□□ -1.15
UBR4-203ENST00000375225 UBE2BP63146 152 aa7.87□□□□□ -1.15
UBR4-203ENST00000375225 CASC10Q5T4H9 136 aa7.87□□□□□ -1.15
UBR4-203ENST00000375225 C16orf90A8MZG2 172 aa7.86□□□□□ -1.15
UBR4-203ENST00000375225 F8WEM9 126 aa7.86□□□□□ -1.15
UBR4-203ENST00000375225 FAM168BA1KXE4 195 aa7.85□□□□□ -1.15
UBR4-203ENST00000375225 BPY2O14599 106 aa7.84□□□□□ -1.15
UBR4-203ENST00000375225 J3KT08 172 aa7.83□□□□□ -1.16
UBR4-203ENST00000375225 Q9BRP9 147 aa7.83□□□□□ -1.16
UBR4-203ENST00000375225 RPS28P62857 69 aaKnown RBP7.83□□□□□ -1.16
UBR4-203ENST00000375225 C1orf137Q5JT78 98 aa7.83□□□□□ -1.16
UBR4-203ENST00000375225 WWC2-AS2Q96NR7 200 aa7.83□□□□□ -1.16
UBR4-203ENST00000375225 DYNC2H1Q8NCM8 4307 aaKnown RBP7.81□□□□□ -1.16
UBR4-203ENST00000375225 Q8NBF4 154 aa7.81□□□□□ -1.16
UBR4-203ENST00000375225 TNP2Q05952 138 aa7.8□□□□□ -1.16
UBR4-203ENST00000375225 LINC00474Q9P2X8 69 aa7.8□□□□□ -1.16
UBR4-203ENST00000375225 FBN3Q75N90 2809 aa7.8□□□□□ -1.16
UBR4-203ENST00000375225 NDUFC1O43677 76 aa7.79□□□□□ -1.16
UBR4-203ENST00000375225 SCXQ7RTU7 201 aa7.79□□□□□ -1.16
UBR4-203ENST00000375225 A0A096LNI7 61 aa7.78□□□□□ -1.16
UBR4-203ENST00000375225 C3orf84H3BNL1 204 aa7.78□□□□□ -1.16
UBR4-203ENST00000375225 J3QL48 77 aa7.78□□□□□ -1.16
UBR4-203ENST00000375225 ERC2-IT1O76042 136 aa7.78□□□□□ -1.16
UBR4-203ENST00000375225 KRTAP7-1Q8IUC3 87 aa7.78□□□□□ -1.16
UBR4-203ENST00000375225 C20orf197Q8N268 126 aa7.78□□□□□ -1.16
UBR4-203ENST00000375225 DNAH7Q8WXX0 4024 aa7.78□□□□□ -1.16
UBR4-203ENST00000375225 SPRR4Q96PI1 79 aa7.78□□□□□ -1.16
UBR4-203ENST00000375225 IGKV2-24A0A0C4DH68 120 aa7.77□□□□□ -1.17
UBR4-203ENST00000375225 NBDYA0A0U1RRE5 68 aa7.77□□□□□ -1.17
UBR4-203ENST00000375225 ST20-AS1Q8NBB2 130 aa7.77□□□□□ -1.17
UBR4-203ENST00000375225 CSMD3Q7Z407 3707 aa7.76□□□□□ -1.17
UBR4-203ENST00000375225 H0Y9J4 135 aa7.76□□□□□ -1.17
UBR4-203ENST00000375225 IGKV4-1P06312 121 aa7.76□□□□□ -1.17
UBR4-203ENST00000375225 KLKP1Q107X0 134 aa7.76□□□□□ -1.17
UBR4-203ENST00000375225 KRTAP3-3Q9BYR6 98 aa7.76□□□□□ -1.17
UBR4-203ENST00000375225 KRTAP3-2Q9BYR7 98 aa7.76□□□□□ -1.17
UBR4-203ENST00000375225 KRTAP1-5Q9BYS1 174 aa7.76□□□□□ -1.17
UBR4-203ENST00000375225 A0A1W2PNM2 257 aa7.75□□□□□ -1.17
UBR4-203ENST00000375225 LCE2DQ5TA82 110 aaPredicted RBP7.74□□□□□ -1.17
UBR4-203ENST00000375225 PLECQ15149 4684 aaKnown RBP7.74□□□□□ -1.17
UBR4-203ENST00000375225 STARD9Q9P2P6 4700 aa7.74□□□□□ -1.17
UBR4-203ENST00000375225 ATP5EP56381 51 aaPredicted RBP7.73□□□□□ -1.17
UBR4-203ENST00000375225 C9orf163Q8N9P6 203 aa7.73□□□□□ -1.17
UBR4-203ENST00000375225 IGLV8-61A0A075B6I0 122 aa7.73□□□□□ -1.17
UBR4-203ENST00000375225 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.73□□□□□ -1.17
UBR4-203ENST00000375225 FAM236DA0A1B0GTK5 79 aa7.73□□□□□ -1.17
UBR4-203ENST00000375225 FAM236CP0DP71 79 aa7.73□□□□□ -1.17
UBR4-203ENST00000375225 LINC00476Q8WZB0 136 aa7.73□□□□□ -1.17
UBR4-203ENST00000375225 DPH3Q96FX2 82 aa7.73□□□□□ -1.17
UBR4-203ENST00000375225 A0A1W2PNN7 141 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms