RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 TOMM6Q96B49 74 aa6.37□□□□□ -1.39
HDAC8-204ENST00000373560 URB1-AS1Q96HZ7 61 aa6.37□□□□□ -1.39
HDAC8-204ENST00000373560 AMELXQ99217 191 aa6.37□□□□□ -1.39
HDAC8-204ENST00000373560 C2orf88Q9BSF0 95 aa6.37□□□□□ -1.39
HDAC8-204ENST00000373560 VCX2Q9H322 139 aa6.37□□□□□ -1.39
HDAC8-204ENST00000373560 F8VRH5 84 aa6.36□□□□□ -1.39
HDAC8-204ENST00000373560 FABP4P15090 132 aa6.36□□□□□ -1.39
HDAC8-204ENST00000373560 Q8NDZ9 215 aa6.36□□□□□ -1.39
HDAC8-204ENST00000373560 TIMM17AQ99595 171 aa6.36□□□□□ -1.39
HDAC8-204ENST00000373560 HIST1H2BLQ99880 126 aa6.36□□□□□ -1.39
HDAC8-204ENST00000373560 MAP1LC3CQ9BXW4 147 aa6.36□□□□□ -1.39
HDAC8-204ENST00000373560 IGLV9-49A0A0B4J1Y8 123 aa6.35□□□□□ -1.39
HDAC8-204ENST00000373560 PRYO14603 147 aa6.35□□□□□ -1.39
HDAC8-204ENST00000373560 PDZD11Q5EBL8 140 aa6.35□□□□□ -1.39
HDAC8-204ENST00000373560 LINC01561Q8N1V8 128 aa6.35□□□□□ -1.39
HDAC8-204ENST00000373560 SCGB3A1Q96QR1 104 aa6.35□□□□□ -1.39
HDAC8-204ENST00000373560 C20orf202A1L168 122 aa6.34□□□□□ -1.39
HDAC8-204ENST00000373560 ERASQ7Z444 233 aa6.34□□□□□ -1.39
HDAC8-204ENST00000373560 VPREB1P12018 145 aa6.33□□□□□ -1.4
HDAC8-204ENST00000373560 PET117Q6UWS5 81 aa6.33□□□□□ -1.4
HDAC8-204ENST00000373560 IFI27L1Q96BM0 104 aa6.33□□□□□ -1.4
HDAC8-204ENST00000373560 A0A096LNJ9 63 aa6.32□□□□□ -1.4
HDAC8-204ENST00000373560 RPL37P61927 97 aaKnown RBP6.32□□□□□ -1.4
HDAC8-204ENST00000373560 PMCHL1Q16048 86 aa6.32□□□□□ -1.4
HDAC8-204ENST00000373560 FAM19A3Q7Z5A8 133 aa6.32□□□□□ -1.4
HDAC8-204ENST00000373560 LINC00846Q9NV44 126 aa6.32□□□□□ -1.4
HDAC8-204ENST00000373560 TRAV12-1A0A0B4J245 112 aa6.31□□□□□ -1.4
HDAC8-204ENST00000373560 IGLV6-57P01721 117 aa6.31□□□□□ -1.4
HDAC8-204ENST00000373560 HERVK_113P63121 156 aa6.31□□□□□ -1.4
HDAC8-204ENST00000373560 SEC11AP67812 179 aa6.31□□□□□ -1.4
HDAC8-204ENST00000373560 LINC00483Q53H64 154 aa6.31□□□□□ -1.4
HDAC8-204ENST00000373560 ZNF706Q9Y5V0 76 aaPredicted RBP6.31□□□□□ -1.4
HDAC8-204ENST00000373560 LOC105371267A0A1B0GV96 52 aa6.3□□□□□ -1.4
HDAC8-204ENST00000373560 SYS1-DBNDD2H3BUS1 97 aa6.3□□□□□ -1.4
HDAC8-204ENST00000373560 KRTDAPP60985 99 aa6.3□□□□□ -1.4
HDAC8-204ENST00000373560 PMVKQ15126 192 aa6.3□□□□□ -1.4
HDAC8-204ENST00000373560 CST9LQ9H4G1 147 aa6.3□□□□□ -1.4
HDAC8-204ENST00000373560 GEMIN7Q9H840 131 aaKnown RBP6.3□□□□□ -1.4
HDAC8-204ENST00000373560 CDKN2A-AS1Q9UH64 79 aa6.3□□□□□ -1.4
HDAC8-204ENST00000373560 C3orf79P0CE67 100 aa6.29□□□□□ -1.4
HDAC8-204ENST00000373560 JOSD1Q15040 202 aaPredicted RBP6.29□□□□□ -1.4
HDAC8-204ENST00000373560 TINCRA0A1B0GVN0 87 aa6.28□□□□□ -1.4
HDAC8-204ENST00000373560 SCGB1D1O95968 90 aa6.28□□□□□ -1.4
HDAC8-204ENST00000373560 KRTAP10-10P60014 251 aa6.28□□□□□ -1.4
HDAC8-204ENST00000373560 Q8N9P0 234 aaPredicted RBP6.28□□□□□ -1.4
HDAC8-204ENST00000373560 SMCR5Q8TEV8 140 aa6.28□□□□□ -1.4
HDAC8-204ENST00000373560 IGLV5-45A0A087WSX0 123 aa6.27□□□□□ -1.41
HDAC8-204ENST00000373560 SMIM6P0DI80 62 aa6.27□□□□□ -1.41
HDAC8-204ENST00000373560 PLNP26678 52 aa6.27□□□□□ -1.41
HDAC8-204ENST00000373560 GAGE2AQ6NT46 116 aa6.27□□□□□ -1.41
HDAC8-204ENST00000373560 SVIPQ8NHG7 77 aa6.27□□□□□ -1.41
HDAC8-204ENST00000373560 SMIM1B2RUZ4 78 aa6.26□□□□□ -1.41
HDAC8-204ENST00000373560 LINC01545Q5VT33 79 aa6.26□□□□□ -1.41
HDAC8-204ENST00000373560 SSBP3-AS1Q7Z2R9 100 aa6.26□□□□□ -1.41
HDAC8-204ENST00000373560 CHTOPQ9Y3Y2 248 aaKnown RBP6.26□□□□□ -1.41
HDAC8-204ENST00000373560 HSBP1L1C9JCN9 74 aa6.25□□□□□ -1.41
HDAC8-204ENST00000373560 DPM2O94777 84 aa6.25□□□□□ -1.41
HDAC8-204ENST00000373560 S100A12P80511 92 aa6.25□□□□□ -1.41
HDAC8-204ENST00000373560 H0Y8G0 127 aa6.24□□□□□ -1.41
HDAC8-204ENST00000373560 IGKCP01834 107 aa6.24□□□□□ -1.41
HDAC8-204ENST00000373560 SPINK8P0C7L1 97 aa6.24□□□□□ -1.41
HDAC8-204ENST00000373560 IGLC3P0DOY3 106 aa6.24□□□□□ -1.41
HDAC8-204ENST00000373560 CXCL5P42830 114 aa6.24□□□□□ -1.41
HDAC8-204ENST00000373560 ERC2-IT1O76042 136 aa6.23□□□□□ -1.41
HDAC8-204ENST00000373560 PYY3Q5JQD4 70 aa6.23□□□□□ -1.41
HDAC8-204ENST00000373560 MPLKIPQ8TAP9 179 aa6.23□□□□□ -1.41
HDAC8-204ENST00000373560 COX7B2Q8TF08 81 aa6.23□□□□□ -1.41
HDAC8-204ENST00000373560 MDN1Q9NU22 5596 aa6.23□□□□□ -1.41
HDAC8-204ENST00000373560 H3BRM9 83 aa6.22□□□□□ -1.41
HDAC8-204ENST00000373560 ZNF22P17026 224 aaPredicted RBP6.22□□□□□ -1.41
HDAC8-204ENST00000373560 HERVK_113P61574 105 aa6.22□□□□□ -1.41
HDAC8-204ENST00000373560 IGLV5-39A0A0G2JS06 123 aa6.21□□□□□ -1.42
HDAC8-204ENST00000373560 C11orf86A6NJI1 115 aa6.21□□□□□ -1.42
HDAC8-204ENST00000373560 VAMP8Q9BV40 100 aa6.21□□□□□ -1.42
HDAC8-204ENST00000373560 SND1-IT1Q9HBX3 110 aa6.21□□□□□ -1.42
HDAC8-204ENST00000373560 KMT2DO14686 5537 aa6.2□□□□□ -1.42
HDAC8-204ENST00000373560 PFN2P35080 140 aa6.2□□□□□ -1.42
HDAC8-204ENST00000373560 TMEM170BQ5T4T1 132 aa6.19□□□□□ -1.42
HDAC8-204ENST00000373560 C9orf153Q5TBE3 101 aa6.19□□□□□ -1.42
HDAC8-204ENST00000373560 HRCT1Q6UXD1 115 aa6.19□□□□□ -1.42
HDAC8-204ENST00000373560 LINC00518Q8N0U6 118 aa6.19□□□□□ -1.42
HDAC8-204ENST00000373560 C12orf57Q99622 126 aa6.18□□□□□ -1.42
HDAC8-204ENST00000373560 PMCHL2Q9BQD1 86 aa6.17□□□□□ -1.42
HDAC8-204ENST00000373560 LGALS3P17931 250 aaKnown RBP6.16□□□□□ -1.42
HDAC8-204ENST00000373560 SPRR1AP35321 89 aa6.16□□□□□ -1.42
HDAC8-204ENST00000373560 TMEM223A0PJW6 202 aa6.15□□□□□ -1.42
HDAC8-204ENST00000373560 E9PLD3 99 aa6.15□□□□□ -1.42
HDAC8-204ENST00000373560 PCP4P48539 62 aa6.15□□□□□ -1.42
HDAC8-204ENST00000373560 SPATA45Q537H7 98 aa6.15□□□□□ -1.42
HDAC8-204ENST00000373560 SFTA2Q6UW10 78 aa6.15□□□□□ -1.42
HDAC8-204ENST00000373560 ATOH7Q8N100 152 aa6.15□□□□□ -1.42
HDAC8-204ENST00000373560 TSTD3H0UI37 97 aa6.14□□□□□ -1.43
HDAC8-204ENST00000373560 LEPROTO15243 131 aa6.14□□□□□ -1.43
HDAC8-204ENST00000373560 RPL24P83731 157 aaKnown RBP6.14□□□□□ -1.43
HDAC8-204ENST00000373560 ZNF625Q96I27 306 aaPredicted RBP6.14□□□□□ -1.43
HDAC8-204ENST00000373560 PAM16Q9Y3D7 125 aa6.14□□□□□ -1.43
HDAC8-204ENST00000373560 DLEU1O43261 78 aa6.13□□□□□ -1.43
HDAC8-204ENST00000373560 KRTAP2-3P0C7H8 128 aa6.13□□□□□ -1.43
HDAC8-204ENST00000373560 NMUP48645 174 aa6.13□□□□□ -1.43
HDAC8-204ENST00000373560 KRTAP2-4Q9BYR9 128 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms