RNA–Protein interactions for RNA: ENST00000372405.1

PTPRF-202, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-202ENST00000372405 A0A1B0GX51 115 aa8.77□□□□□ -1
PTPRF-202ENST00000372405 CHTF8P0CG12 524 aa8.77□□□□□ -1
PTPRF-202ENST00000372405 KCNQ1DNQ9H478 68 aa8.77□□□□□ -1
PTPRF-202ENST00000372405 A0A1W2PNN7 141 aa8.77□□□□□ -1.01
PTPRF-202ENST00000372405 RPL37AP8A6NKH3 93 aa8.77□□□□□ -1.01
PTPRF-202ENST00000372405 C1orf134Q5TEV5 83 aa8.77□□□□□ -1.01
PTPRF-202ENST00000372405 SDIM1Q6ZPB5 146 aa8.77□□□□□ -1.01
PTPRF-202ENST00000372405 SIGMAR1Q99720 223 aa8.77□□□□□ -1.01
PTPRF-202ENST00000372405 IGLV1-50A0A075B6I6 118 aa8.76□□□□□ -1.01
PTPRF-202ENST00000372405 ELOF1P60002 83 aaKnown RBP8.76□□□□□ -1.01
PTPRF-202ENST00000372405 FUSP35637 526 aaKnown RBP eCLIP8.75□□□□□ -1.013e-9■■■■■ 29.2
PTPRF-202ENST00000372405 MRPL55Q7Z7F7 128 aaKnown RBP8.75□□□□□ -1.01
PTPRF-202ENST00000372405 TRBV7-6A0A0J9YX20 115 aa8.75□□□□□ -1.01
PTPRF-202ENST00000372405 COX7BP24311 80 aa8.75□□□□□ -1.01
PTPRF-202ENST00000372405 PANO1I0J062 215 aa8.74□□□□□ -1.01
PTPRF-202ENST00000372405 SCGB1A1P11684 91 aa8.74□□□□□ -1.01
PTPRF-202ENST00000372405 hADV29S1A0JD25 119 aa8.73□□□□□ -1.01
PTPRF-202ENST00000372405 LINC00528Q8N1L1 170 aa8.73□□□□□ -1.01
PTPRF-202ENST00000372405 CDIP1Q9H305 208 aa8.73□□□□□ -1.01
PTPRF-202ENST00000372405 KRTAP4-16G5E9R7 235 aaPredicted RBP8.73□□□□□ -1.01
PTPRF-202ENST00000372405 ORMDL1Q9P0S3 153 aa8.73□□□□□ -1.01
PTPRF-202ENST00000372405 SPRR1AP35321 89 aa8.72□□□□□ -1.01
PTPRF-202ENST00000372405 DNAH11Q96DT5 4516 aa8.71□□□□□ -1.02
PTPRF-202ENST00000372405 PRYO14603 147 aa8.7□□□□□ -1.02
PTPRF-202ENST00000372405 RTL8CO15255 209 aa8.7□□□□□ -1.02
PTPRF-202ENST00000372405 TNP2Q05952 138 aa8.7□□□□□ -1.02
PTPRF-202ENST00000372405 Q6ZQY7 126 aa8.7□□□□□ -1.02
PTPRF-202ENST00000372405 SACSQ9NZJ4 4579 aa8.69□□□□□ -1.02
PTPRF-202ENST00000372405 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.69□□□□□ -1.02
PTPRF-202ENST00000372405 FAT2Q9NYQ8 4349 aa8.68□□□□□ -1.02
PTPRF-202ENST00000372405 B5MCH6 92 aa8.68□□□□□ -1.02
PTPRF-202ENST00000372405 SNCGO76070 127 aa8.68□□□□□ -1.02
PTPRF-202ENST00000372405 KRTAP11-1Q8IUC1 163 aa8.68□□□□□ -1.02
PTPRF-202ENST00000372405 OBSCN-AS1Q96MR7 158 aa8.68□□□□□ -1.02
PTPRF-202ENST00000372405 PKIGQ9Y2B9 76 aa8.68□□□□□ -1.02
PTPRF-202ENST00000372405 DNAH5Q8TE73 4624 aa8.67□□□□□ -1.02
PTPRF-202ENST00000372405 PHF5AQ7RTV0 110 aaKnown RBP8.67□□□□□ -1.02
PTPRF-202ENST00000372405 SPACA4Q8TDM5 124 aa8.67□□□□□ -1.02
PTPRF-202ENST00000372405 Q6ZRX8 168 aa8.66□□□□□ -1.02
PTPRF-202ENST00000372405 Q9BRP9 147 aa8.66□□□□□ -1.02
PTPRF-202ENST00000372405 TMEM256-PLSCR3K7ERE1 68 aa8.66□□□□□ -1.02
PTPRF-202ENST00000372405 LINC00474Q9P2X8 69 aa8.66□□□□□ -1.02
PTPRF-202ENST00000372405 REG3GQ6UW15 175 aa8.65□□□□□ -1.02
PTPRF-202ENST00000372405 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.65□□□□□ -1.02
PTPRF-202ENST00000372405 PKD1P98161 4303 aa8.65□□□□□ -1.03
PTPRF-202ENST00000372405 XGP55808 180 aa8.64□□□□□ -1.03
PTPRF-202ENST00000372405 A0A1B0GV72 72 aa8.64□□□□□ -1.03
PTPRF-202ENST00000372405 ETDCA0A1B0GVM5 59 aa8.64□□□□□ -1.03
PTPRF-202ENST00000372405 EPM2AB3EWF7 344 aa8.64□□□□□ -1.03
PTPRF-202ENST00000372405 DNAH8Q96JB1 4490 aa8.63□□□□□ -1.03
PTPRF-202ENST00000372405 IGLV5-52A0A0A0MRZ9 124 aa8.63□□□□□ -1.03
PTPRF-202ENST00000372405 MT-ATP8P03928 68 aa8.63□□□□□ -1.03
PTPRF-202ENST00000372405 C14orf132Q9NPU4 83 aa8.62□□□□□ -1.03
PTPRF-202ENST00000372405 INAFM2P0DMQ5 153 aa8.62□□□□□ -1.03
PTPRF-202ENST00000372405 KRTAP10-2P60368 255 aa8.62□□□□□ -1.03
PTPRF-202ENST00000372405 DHRS4-AS1Q9P1J3 65 aa8.61□□□□□ -1.03
PTPRF-202ENST00000372405 ERC2-IT1O76042 136 aa8.6□□□□□ -1.03
PTPRF-202ENST00000372405 UBE2BP63146 152 aa8.6□□□□□ -1.03
PTPRF-202ENST00000372405 DPH3Q96FX2 82 aa8.6□□□□□ -1.03
PTPRF-202ENST00000372405 LINC01547P58512 204 aaPredicted RBP8.59□□□□□ -1.03
PTPRF-202ENST00000372405 SMCR5Q8TEV8 140 aa8.59□□□□□ -1.03
PTPRF-202ENST00000372405 PRLHP81277 87 aa8.58□□□□□ -1.04
PTPRF-202ENST00000372405 FAM240AA0A1B0GVK7 77 aa8.57□□□□□ -1.04
PTPRF-202ENST00000372405 JMJD7-PLA2G4BH0Y9G9 81 aa8.57□□□□□ -1.04
PTPRF-202ENST00000372405 FAM19A1Q7Z5A9 133 aa8.57□□□□□ -1.04
PTPRF-202ENST00000372405 ST20-AS1Q8NBB2 130 aa8.57□□□□□ -1.04
PTPRF-202ENST00000372405 H3BQ85 93 aa8.57□□□□□ -1.04
PTPRF-202ENST00000372405 Q8N377 158 aa8.57□□□□□ -1.04
PTPRF-202ENST00000372405 LAMTOR3Q9UHA4 124 aa8.57□□□□□ -1.04
PTPRF-202ENST00000372405 PLAC8Q9NZF1 115 aa8.56□□□□□ -1.04
PTPRF-202ENST00000372405 SRRM2Q9UQ35 2752 aaKnown RBP8.56□□□□□ -1.04
PTPRF-202ENST00000372405 GAGE2AQ6NT46 116 aa8.55□□□□□ -1.04
PTPRF-202ENST00000372405 LCE6AA0A183 80 aa8.55□□□□□ -1.04
PTPRF-202ENST00000372405 DEFB105AQ8NG35 78 aa8.55□□□□□ -1.04
PTPRF-202ENST00000372405 NDUFV3P56181 108 aaKnown RBP8.54□□□□□ -1.04
PTPRF-202ENST00000372405 IGLV5-48A0A075B6I7 105 aa8.53□□□□□ -1.04
PTPRF-202ENST00000372405 GHRHP01286 108 aa8.53□□□□□ -1.04
PTPRF-202ENST00000372405 RBM3P98179 157 aaKnown RBP8.53□□□□□ -1.04
PTPRF-202ENST00000372405 FAM30AQ9NZY2 134 aa8.53□□□□□ -1.04
PTPRF-202ENST00000372405 RYR2Q92736 4967 aa8.52□□□□□ -1.05
PTPRF-202ENST00000372405 KMT2CQ8NEZ4 4911 aaKnown RBP8.52□□□□□ -1.05
PTPRF-202ENST00000372405 H0Y9J4 135 aa8.52□□□□□ -1.05
PTPRF-202ENST00000372405 CCKP06307 115 aa8.52□□□□□ -1.05
PTPRF-202ENST00000372405 C3orf22Q8N5N4 141 aa8.52□□□□□ -1.05
PTPRF-202ENST00000372405 LOC110117498A0A087WWA1 95 aa8.51□□□□□ -1.05
PTPRF-202ENST00000372405 BCE1O60756 84 aa8.51□□□□□ -1.05
PTPRF-202ENST00000372405 ACYP1P07311 99 aa8.51□□□□□ -1.05
PTPRF-202ENST00000372405 Q6ZQT0 140 aa8.51□□□□□ -1.05
PTPRF-202ENST00000372405 KRTAP13-1Q8IUC0 172 aa8.51□□□□□ -1.05
PTPRF-202ENST00000372405 HIGD2AQ9BW72 106 aa8.51□□□□□ -1.05
PTPRF-202ENST00000372405 TRBV7-4A0A0J9YYF1 115 aa8.5□□□□□ -1.05
PTPRF-202ENST00000372405 KRTAP10-1P60331 282 aa8.5□□□□□ -1.05
PTPRF-202ENST00000372405 Q6Q795 121 aa8.49□□□□□ -1.05
PTPRF-202ENST00000372405 PKHD1P08F94 4074 aa8.48□□□□□ -1.05
PTPRF-202ENST00000372405 UBE2AP49459 152 aa8.48□□□□□ -1.05
PTPRF-202ENST00000372405 Q6ZSA8 131 aa8.48□□□□□ -1.05
PTPRF-202ENST00000372405 DSCR8Q96T75 97 aa8.48□□□□□ -1.05
PTPRF-202ENST00000372405 LINC00846Q9NV44 126 aa8.48□□□□□ -1.05
PTPRF-202ENST00000372405 PSORS1C2Q9UIG4 136 aa8.48□□□□□ -1.05
PTPRF-202ENST00000372405 SMIM29Q86T20 159 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms