RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 DYNC2H1Q8NCM8 4307 aaKnown RBP12.93□□□□□ -0.34
LHX3-202ENST00000371748 UBE2DNLQ8IWF7 75 aa12.93□□□□□ -0.34
LHX3-202ENST00000371748 DIRC1Q969H9 104 aa12.92□□□□□ -0.34
LHX3-202ENST00000371748 DPH3Q96FX2 82 aa12.92□□□□□ -0.34
LHX3-202ENST00000371748 UBL5Q9BZL1 73 aa12.92□□□□□ -0.34
LHX3-202ENST00000371748 DNAH10Q8IVF4 4471 aa12.92□□□□□ -0.34
LHX3-202ENST00000371748 ZNF73O43830 326 aaPredicted RBP12.92□□□□□ -0.34
LHX3-202ENST00000371748 GHRHP01286 108 aa12.92□□□□□ -0.34
LHX3-202ENST00000371748 Q6ZQT0 140 aa12.92□□□□□ -0.34
LHX3-202ENST00000371748 RBM3P98179 157 aaKnown RBP12.9□□□□□ -0.34
LHX3-202ENST00000371748 DNAH7Q8WXX0 4024 aa12.9□□□□□ -0.34
LHX3-202ENST00000371748 SERTAD4-AS1Q5TG53 156 aa12.89□□□□□ -0.35
LHX3-202ENST00000371748 TLX1NBP0CAT3 122 aa12.88□□□□□ -0.35
LHX3-202ENST00000371748 LOC110117498A0A087WWA1 95 aa12.88□□□□□ -0.35
LHX3-202ENST00000371748 M0R2N4 97 aa12.87□□□□□ -0.35
LHX3-202ENST00000371748 DSCR8Q96T75 97 aa12.87□□□□□ -0.35
LHX3-202ENST00000371748 COX7BP24311 80 aa12.86□□□□□ -0.35
LHX3-202ENST00000371748 PRKDCP78527 4128 aaKnown RBP12.86□□□□□ -0.35
LHX3-202ENST00000371748 PLECQ15149 4684 aaKnown RBP12.86□□□□□ -0.35
LHX3-202ENST00000371748 NKAPP1Q8N9T2 125 aa12.86□□□□□ -0.35
LHX3-202ENST00000371748 LAMTOR3Q9UHA4 124 aa12.85□□□□□ -0.35
LHX3-202ENST00000371748 TENM2Q9NT68 2774 aa12.85□□□□□ -0.35
LHX3-202ENST00000371748 OXTP01178 125 aa12.85□□□□□ -0.35
LHX3-202ENST00000371748 ELOF1P60002 83 aaKnown RBP12.85□□□□□ -0.35
LHX3-202ENST00000371748 Q6ZQY7 126 aa12.85□□□□□ -0.35
LHX3-202ENST00000371748 FAM168BA1KXE4 195 aa12.84□□□□□ -0.35
LHX3-202ENST00000371748 C7orf33Q8WU49 177 aa12.83□□□□□ -0.36
LHX3-202ENST00000371748 PSCAO43653 123 aa12.81□□□□□ -0.36
LHX3-202ENST00000371748 LINC01547P58512 204 aaPredicted RBP12.81□□□□□ -0.36
LHX3-202ENST00000371748 DNHD1Q96M86 4753 aa12.81□□□□□ -0.36
LHX3-202ENST00000371748 TRBV7-6A0A0J9YX20 115 aa12.8□□□□□ -0.36
LHX3-202ENST00000371748 Q6ZVQ6 151 aa12.8□□□□□ -0.36
LHX3-202ENST00000371748 NUPR2A6NF83 97 aa12.79□□□□□ -0.36
LHX3-202ENST00000371748 C20orf197Q8N268 126 aa12.79□□□□□ -0.36
LHX3-202ENST00000371748 PLA2G2DQ9UNK4 145 aa12.79□□□□□ -0.36
LHX3-202ENST00000371748 KRTAP7-1Q8IUC3 87 aa12.78□□□□□ -0.36
LHX3-202ENST00000371748 LINC00528Q8N1L1 170 aa12.78□□□□□ -0.36
LHX3-202ENST00000371748 STARD9Q9P2P6 4700 aa12.77□□□□□ -0.37
LHX3-202ENST00000371748 RPL37AP8A6NKH3 93 aa12.77□□□□□ -0.37
LHX3-202ENST00000371748 HAMPP81172 84 aa12.77□□□□□ -0.37
LHX3-202ENST00000371748 KCNQ1DNQ9H478 68 aa12.77□□□□□ -0.37
LHX3-202ENST00000371748 PDE6GP18545 87 aa12.75□□□□□ -0.37
LHX3-202ENST00000371748 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.75□□□□□ -0.37
LHX3-202ENST00000371748 BCE1O60756 84 aa12.74□□□□□ -0.37
LHX3-202ENST00000371748 C5orf47Q569G3 176 aa12.74□□□□□ -0.37
LHX3-202ENST00000371748 IGLV5-37A0A075B6J1 123 aa12.73□□□□□ -0.37
LHX3-202ENST00000371748 H3BQ85 93 aa12.73□□□□□ -0.37
LHX3-202ENST00000371748 MEGF8Q7Z7M0 2845 aa12.73□□□□□ -0.37
LHX3-202ENST00000371748 TRAV7A0A075B6U4 112 aa12.73□□□□□ -0.37
LHX3-202ENST00000371748 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.72□□□□□ -0.37
LHX3-202ENST00000371748 TRBV7-4A0A0J9YYF1 115 aa12.72□□□□□ -0.37
LHX3-202ENST00000371748 CXCL6P80162 114 aa12.72□□□□□ -0.37
LHX3-202ENST00000371748 IGLV1-50A0A075B6I6 118 aa12.71□□□□□ -0.38
LHX3-202ENST00000371748 NBDYA0A0U1RRE5 68 aa12.71□□□□□ -0.38
LHX3-202ENST00000371748 CNBPP62633 177 aaKnown RBP12.7□□□□□ -0.38
LHX3-202ENST00000371748 H7BZZ5 65 aa12.69□□□□□ -0.38
LHX3-202ENST00000371748 A0A096LNI7 61 aa12.69□□□□□ -0.38
LHX3-202ENST00000371748 IGKV2-24A0A0C4DH68 120 aa12.69□□□□□ -0.38
LHX3-202ENST00000371748 MRPL55Q7Z7F7 128 aaKnown RBP12.69□□□□□ -0.38
LHX3-202ENST00000371748 Q5XG85 94 aa12.68□□□□□ -0.38
LHX3-202ENST00000371748 PRYO14603 147 aa12.66□□□□□ -0.38
LHX3-202ENST00000371748 KLKP1Q107X0 134 aa12.66□□□□□ -0.38
LHX3-202ENST00000371748 FAM236DA0A1B0GTK5 79 aa12.65□□□□□ -0.38
LHX3-202ENST00000371748 FAM236CP0DP71 79 aa12.65□□□□□ -0.38
LHX3-202ENST00000371748 C16orf90A8MZG2 172 aa12.65□□□□□ -0.38
LHX3-202ENST00000371748 KRTAP4-16G5E9R7 235 aaPredicted RBP12.65□□□□□ -0.38
LHX3-202ENST00000371748 C4orf26Q17RF5 130 aa12.65□□□□□ -0.38
LHX3-202ENST00000371748 C14orf177Q52M58 125 aa12.65□□□□□ -0.38
LHX3-202ENST00000371748 VPS13DQ5THJ4 4388 aa12.64□□□□□ -0.39
LHX3-202ENST00000371748 SCXQ7RTU7 201 aa12.64□□□□□ -0.39
LHX3-202ENST00000371748 SPRR1AP35321 89 aa12.63□□□□□ -0.39
LHX3-202ENST00000371748 Q6ZRX8 168 aa12.63□□□□□ -0.39
LHX3-202ENST00000371748 ETDCA0A1B0GVM5 59 aa12.63□□□□□ -0.39
LHX3-202ENST00000371748 LRCOL1A6NCL2 159 aa12.63□□□□□ -0.39
LHX3-202ENST00000371748 Q6ZRN7 208 aaPredicted RBP12.62□□□□□ -0.39
LHX3-202ENST00000371748 Q9BRP9 147 aa12.62□□□□□ -0.39
LHX3-202ENST00000371748 A0A1W2PNN7 141 aa12.61□□□□□ -0.39
LHX3-202ENST00000371748 SNURFQ9Y675 71 aa12.61□□□□□ -0.39
LHX3-202ENST00000371748 EPM2AB3EWF7 344 aa12.61□□□□□ -0.39
LHX3-202ENST00000371748 DEFB105AQ8NG35 78 aa12.61□□□□□ -0.39
LHX3-202ENST00000371748 CHTF8P0CG12 524 aa12.59□□□□□ -0.39
LHX3-202ENST00000371748 DHRS4-AS1Q9P1J3 65 aa12.58□□□□□ -0.4
LHX3-202ENST00000371748 REG3GQ6UW15 175 aa12.57□□□□□ -0.4
LHX3-202ENST00000371748 HRCT1Q6UXD1 115 aa12.56□□□□□ -0.4
LHX3-202ENST00000371748 Q8N377 158 aa12.56□□□□□ -0.4
LHX3-202ENST00000371748 SERP1Q9Y6X1 66 aa12.56□□□□□ -0.4
LHX3-202ENST00000371748 C9orf163Q8N9P6 203 aa12.55□□□□□ -0.4
LHX3-202ENST00000371748 KMT2AQ03164 3969 aa12.54□□□□□ -0.4
LHX3-202ENST00000371748 F8WEM9 126 aa12.54□□□□□ -0.4
LHX3-202ENST00000371748 ST20-AS1Q8NBB2 130 aa12.54□□□□□ -0.4
LHX3-202ENST00000371748 ERC2-IT1O76042 136 aa12.53□□□□□ -0.4
LHX3-202ENST00000371748 UBE2BP63146 152 aa12.53□□□□□ -0.4
LHX3-202ENST00000371748 Q8N9L7 120 aa12.5□□□□□ -0.41
LHX3-202ENST00000371748 BPY2O14599 106 aa12.5□□□□□ -0.41
LHX3-202ENST00000371748 NREPQ16612 68 aa12.5□□□□□ -0.41
LHX3-202ENST00000371748 PHF5AQ7RTV0 110 aaKnown RBP12.5□□□□□ -0.41
LHX3-202ENST00000371748 IGKV4-1P06312 121 aa12.48□□□□□ -0.41
LHX3-202ENST00000371748 PRLHP81277 87 aa12.47□□□□□ -0.41
LHX3-202ENST00000371748 KRTAP11-1Q8IUC1 163 aa12.47□□□□□ -0.41
LHX3-202ENST00000371748 NDUFC1O43677 76 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms