RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 NDUFA1O15239 70 aa2.31□□□□□ -2.04
MCF2-202ENST00000370573 LGALS3P17931 250 aaKnown RBP2.31□□□□□ -2.04
MCF2-202ENST00000370573 TMEM258P61165 79 aa2.31□□□□□ -2.04
MCF2-202ENST00000370573 HIGD2BQ4VC39 106 aa2.31□□□□□ -2.04
MCF2-202ENST00000370573 C2orf82Q6UX34 121 aa2.31□□□□□ -2.04
MCF2-202ENST00000370573 FAM19A5Q7Z5A7 132 aaPredicted RBP2.31□□□□□ -2.04
MCF2-202ENST00000370573 RMI2Q96E14 147 aa2.31□□□□□ -2.04
MCF2-202ENST00000370573 NDUFA12Q9UI09 145 aa2.31□□□□□ -2.04
MCF2-202ENST00000370573 A0A0J9YXY3 114 aa2.3□□□□□ -2.04
MCF2-202ENST00000370573 ZNF815PA8K554 130 aa2.3□□□□□ -2.04
MCF2-202ENST00000370573 LECT2O14960 151 aa2.3□□□□□ -2.04
MCF2-202ENST00000370573 SPAG11BQ08648 103 aa2.3□□□□□ -2.04
MCF2-202ENST00000370573 Q8IZM0 81 aa2.3□□□□□ -2.04
MCF2-202ENST00000370573 C3orf22Q8N5N4 141 aa2.3□□□□□ -2.04
MCF2-202ENST00000370573 FRAS1Q86XX4 4008 aa2.3□□□□□ -2.04
MCF2-202ENST00000370573 DNAH11Q96DT5 4516 aa2.3□□□□□ -2.04
MCF2-202ENST00000370573 GVQW2A0A096LPI5 108 aaPredicted RBP2.3□□□□□ -2.04
MCF2-202ENST00000370573 LRCOL1A6NCL2 159 aa2.3□□□□□ -2.04
MCF2-202ENST00000370573 NDUFC2-KCTD14E9PQ53 114 aa2.3□□□□□ -2.04
MCF2-202ENST00000370573 CFC1BP0CG36 223 aa2.3□□□□□ -2.04
MCF2-202ENST00000370573 CFC1P0CG37 223 aa2.3□□□□□ -2.04
MCF2-202ENST00000370573 CRYGAP11844 174 aa2.3□□□□□ -2.04
MCF2-202ENST00000370573 UNQ6190/PRO20217Q6UXQ8 127 aa2.3□□□□□ -2.04
MCF2-202ENST00000370573 RYR2Q92736 4967 aa2.29□□□□□ -2.04
MCF2-202ENST00000370573 LCE6AA0A183 80 aa2.29□□□□□ -2.04
MCF2-202ENST00000370573 CXCL5P42830 114 aa2.29□□□□□ -2.04
MCF2-202ENST00000370573 C9orf116Q5BN46 136 aaPredicted RBP2.29□□□□□ -2.04
MCF2-202ENST00000370573 KMT2CQ8NEZ4 4911 aaKnown RBP2.29□□□□□ -2.04
MCF2-202ENST00000370573 HECTD4Q9Y4D8 3996 aa2.29□□□□□ -2.04
MCF2-202ENST00000370573 PSCAO43653 123 aa2.29□□□□□ -2.04
MCF2-202ENST00000370573 FXYD2P54710 66 aa2.29□□□□□ -2.04
MCF2-202ENST00000370573 C9orf153Q5TBE3 101 aa2.29□□□□□ -2.04
MCF2-202ENST00000370573 C1orf134Q5TEV5 83 aa2.29□□□□□ -2.04
MCF2-202ENST00000370573 Q6ZRU5 148 aa2.29□□□□□ -2.04
MCF2-202ENST00000370573 FAM19A1Q7Z5A9 133 aa2.29□□□□□ -2.04
MCF2-202ENST00000370573 COPS9Q8WXC6 57 aa2.29□□□□□ -2.04
MCF2-202ENST00000370573 NHP2Q9NX24 153 aaKnown RBP2.29□□□□□ -2.04
MCF2-202ENST00000370573 C6orf48Q9UBA6 75 aa2.29□□□□□ -2.04
MCF2-202ENST00000370573 FAT2Q9NYQ8 4349 aa2.29□□□□□ -2.04
MCF2-202ENST00000370573 IGLV7-46A0A075B6I9 117 aa2.28□□□□□ -2.04
MCF2-202ENST00000370573 RTL8CO15255 209 aa2.28□□□□□ -2.04
MCF2-202ENST00000370573 CXCL6P80162 114 aa2.28□□□□□ -2.04
MCF2-202ENST00000370573 SCGB1D4Q6XE38 83 aa2.28□□□□□ -2.04
MCF2-202ENST00000370573 DAND5Q8N907 189 aa2.28□□□□□ -2.04
MCF2-202ENST00000370573 A0A087WTM6 91 aa2.28□□□□□ -2.04
MCF2-202ENST00000370573 TIMM17BO60830 172 aa2.28□□□□□ -2.04
MCF2-202ENST00000370573 PFN2P35080 140 aa2.28□□□□□ -2.04
MCF2-202ENST00000370573 SYCNQ0VAF6 134 aa2.28□□□□□ -2.04
MCF2-202ENST00000370573 CARD19Q96LW7 228 aa2.28□□□□□ -2.04
MCF2-202ENST00000370573 CAMK2N2Q96S95 79 aa2.28□□□□□ -2.04
MCF2-202ENST00000370573 PKD1P98161 4303 aa2.28□□□□□ -2.05
MCF2-202ENST00000370573 ATOX1O00244 68 aa2.27□□□□□ -2.05
MCF2-202ENST00000370573 FUSP35637 526 aaKnown RBP eCLIP2.27□□□□□ -2.05
MCF2-202ENST00000370573 LINC00158P58513 81 aa2.27□□□□□ -2.05
MCF2-202ENST00000370573 SOSTDC1Q6X4U4 206 aa2.27□□□□□ -2.05
MCF2-202ENST00000370573 ANKRD29Q8N6D5 301 aa2.27□□□□□ -2.05
MCF2-202ENST00000370573 LAMTOR3Q9UHA4 124 aa2.27□□□□□ -2.05
MCF2-202ENST00000370573 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.27□□□□□ -2.05
MCF2-202ENST00000370573 TRBV30A0A0K0K1B3 111 aa2.27□□□□□ -2.05
MCF2-202ENST00000370573 H3BT86 120 aa2.27□□□□□ -2.05
MCF2-202ENST00000370573 COX7CP15954 63 aa2.27□□□□□ -2.05
MCF2-202ENST00000370573 NPC2P61916 151 aa2.27□□□□□ -2.05
MCF2-202ENST00000370573 PRR4Q16378 134 aa2.27□□□□□ -2.05
MCF2-202ENST00000370573 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
MCF2-202ENST00000370573 MUSTN1Q8IVN3 82 aa2.27□□□□□ -2.05
MCF2-202ENST00000370573 Q8N377 158 aa2.27□□□□□ -2.05
MCF2-202ENST00000370573 MIR7-3HGQ8N6C7 128 aa2.27□□□□□ -2.05
MCF2-202ENST00000370573 HIST1H4GQ99525 98 aa2.27□□□□□ -2.05
MCF2-202ENST00000370573 TRACP01848 142 aa2.26□□□□□ -2.05
MCF2-202ENST00000370573 MT3P25713 68 aa2.26□□□□□ -2.05
MCF2-202ENST00000370573 CNBPP62633 177 aaKnown RBP2.26□□□□□ -2.05
MCF2-202ENST00000370573 CIRBPQ14011 172 aaKnown RBP2.26□□□□□ -2.05
MCF2-202ENST00000370573 SFTA2Q6UW10 78 aa2.26□□□□□ -2.05
MCF2-202ENST00000370573 Q8N814 137 aa2.26□□□□□ -2.05
MCF2-202ENST00000370573 LINC00308Q8TCZ7 52 aa2.26□□□□□ -2.05
MCF2-202ENST00000370573 NAA38Q9BRA0 125 aaKnown RBP2.26□□□□□ -2.05
MCF2-202ENST00000370573 SLC25A20O43772 301 aa2.26□□□□□ -2.05
MCF2-202ENST00000370573 COX17Q14061 63 aa2.26□□□□□ -2.05
MCF2-202ENST00000370573 C14orf177Q52M58 125 aa2.26□□□□□ -2.05
MCF2-202ENST00000370573 LINC00643Q86TS7 51 aa2.26□□□□□ -2.05
MCF2-202ENST00000370573 NKAPP1Q8N9T2 125 aa2.26□□□□□ -2.05
MCF2-202ENST00000370573 Q8NDZ9 215 aa2.26□□□□□ -2.05
MCF2-202ENST00000370573 SND1-IT1Q9HBX3 110 aa2.26□□□□□ -2.05
MCF2-202ENST00000370573 RYR3Q15413 4870 aa2.26□□□□□ -2.05
MCF2-202ENST00000370573 DNAH5Q8TE73 4624 aa2.25□□□□□ -2.05
MCF2-202ENST00000370573 LOC107984156A0A0G2JMH3 177 aa2.25□□□□□ -2.05
MCF2-202ENST00000370573 NDUFC2O95298 119 aa2.25□□□□□ -2.05
MCF2-202ENST00000370573 PSMB2P49721 201 aa2.25□□□□□ -2.05
MCF2-202ENST00000370573 ATXN8Q156A1 80 aa2.25□□□□□ -2.05
MCF2-202ENST00000370573 ARL17AQ8IVW1 177 aa2.25□□□□□ -2.05
MCF2-202ENST00000370573 DPH3Q96FX2 82 aa2.25□□□□□ -2.05
MCF2-202ENST00000370573 XAGE1AQ9HD64 81 aa2.25□□□□□ -2.05
MCF2-202ENST00000370573 TRBV10-2A0A0K0K1G8 114 aa2.25□□□□□ -2.05
MCF2-202ENST00000370573 K7ERJ3 54 aa2.25□□□□□ -2.05
MCF2-202ENST00000370573 TLX1NBP0CAT3 122 aa2.25□□□□□ -2.05
MCF2-202ENST00000370573 PRR3P79522 188 aaKnown RBP2.25□□□□□ -2.05
MCF2-202ENST00000370573 C9orf129Q5T035 196 aaKnown RBP2.25□□□□□ -2.05
MCF2-202ENST00000370573 SDIM1Q6ZPB5 146 aa2.25□□□□□ -2.05
MCF2-202ENST00000370573 C9orf163Q8N9P6 203 aa2.25□□□□□ -2.05
MCF2-202ENST00000370573 DNAH8Q96JB1 4490 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms