RNA–Protein interactions for RNA: ENST00000370206.8

CNN3-201, Transcript of calponin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-201ENST00000370206 Q6ZVQ6 151 aa14.31□□□□□ -0.12
CNN3-201ENST00000370206 UPK3BQ9BT76 320 aa14.31□□□□□ -0.12
CNN3-201ENST00000370206 SERP2Q8N6R1 65 aa14.3□□□□□ -0.12
CNN3-201ENST00000370206 IGLV5-37A0A075B6J1 123 aa14.29□□□□□ -0.12
CNN3-201ENST00000370206 CRYGAP11844 174 aa14.27□□□□□ -0.12
CNN3-201ENST00000370206 LINC01547P58512 204 aaPredicted RBP14.27□□□□□ -0.12
CNN3-201ENST00000370206 COL6A5A8TX70 2615 aa14.25□□□□□ -0.13
CNN3-201ENST00000370206 FAM168BA1KXE4 195 aa14.24□□□□□ -0.13
CNN3-201ENST00000370206 HUWE1Q7Z6Z7 4374 aaKnown RBP14.24□□□□□ -0.13
CNN3-201ENST00000370206 HAMPP81172 84 aa14.24□□□□□ -0.13
CNN3-201ENST00000370206 PRYO14603 147 aa14.23□□□□□ -0.13
CNN3-201ENST00000370206 IGLV1-50A0A075B6I6 118 aa14.22□□□□□ -0.13
CNN3-201ENST00000370206 CXCL6P80162 114 aa14.22□□□□□ -0.13
CNN3-201ENST00000370206 KRTAP7-1Q8IUC3 87 aa14.22□□□□□ -0.13
CNN3-201ENST00000370206 NBEAL1Q6ZS30 2694 aa14.21□□□□□ -0.13
CNN3-201ENST00000370206 RPL37AP8A6NKH3 93 aa14.21□□□□□ -0.13
CNN3-201ENST00000370206 KRTAP4-16G5E9R7 235 aaPredicted RBP14.21□□□□□ -0.13
CNN3-201ENST00000370206 Q6ZRX8 168 aa14.2□□□□□ -0.14
CNN3-201ENST00000370206 DNAH1Q9P2D7 4330 aa14.2□□□□□ -0.14
CNN3-201ENST00000370206 SPRR1AP35321 89 aa14.2□□□□□ -0.14
CNN3-201ENST00000370206 DHRS4-AS1Q9P1J3 65 aa14.2□□□□□ -0.14
CNN3-201ENST00000370206 LOC107984640A0A0U1RRK4 108 aa14.19□□□□□ -0.14
CNN3-201ENST00000370206 Q8N377 158 aa14.19□□□□□ -0.14
CNN3-201ENST00000370206 DEFB105AQ8NG35 78 aa14.16□□□□□ -0.14
CNN3-201ENST00000370206 Q9BRP9 147 aa14.16□□□□□ -0.14
CNN3-201ENST00000370206 ETDCA0A1B0GVM5 59 aa14.15□□□□□ -0.14
CNN3-201ENST00000370206 MRPL55Q7Z7F7 128 aaKnown RBP14.15□□□□□ -0.14
CNN3-201ENST00000370206 FAM19A5Q7Z5A7 132 aaPredicted RBP14.15□□□□□ -0.15
CNN3-201ENST00000370206 CYSTM1Q9H1C7 97 aa14.14□□□□□ -0.15
CNN3-201ENST00000370206 IGLV5-48A0A075B6I7 105 aa14.13□□□□□ -0.15
CNN3-201ENST00000370206 BCE1O60756 84 aa14.13□□□□□ -0.15
CNN3-201ENST00000370206 KRTAP1-5Q9BYS1 174 aa14.12□□□□□ -0.15
CNN3-201ENST00000370206 SMIM20Q8N5G0 67 aa14.1□□□□□ -0.15
CNN3-201ENST00000370206 SCXQ7RTU7 201 aa14.09□□□□□ -0.15
CNN3-201ENST00000370206 MGAM2Q2M2H8 2515 aa14.06□□□□□ -0.16
CNN3-201ENST00000370206 ST20-AS1Q8NBB2 130 aa14.06□□□□□ -0.16
CNN3-201ENST00000370206 CNBPP62633 177 aaKnown RBP14.05□□□□□ -0.16
CNN3-201ENST00000370206 APLNQ9ULZ1 77 aa14.05□□□□□ -0.16
CNN3-201ENST00000370206 TNP2Q05952 138 aa14.04□□□□□ -0.16
CNN3-201ENST00000370206 REG3GQ6UW15 175 aa14.04□□□□□ -0.16
CNN3-201ENST00000370206 TRAV7A0A075B6U4 112 aa14.03□□□□□ -0.16
CNN3-201ENST00000370206 ERC2-IT1O76042 136 aa14.03□□□□□ -0.16
CNN3-201ENST00000370206 NREPQ16612 68 aa14.03□□□□□ -0.16
CNN3-201ENST00000370206 UBE2DNLQ8IWF7 75 aa14.03□□□□□ -0.16
CNN3-201ENST00000370206 A0A096LNI7 61 aa14.02□□□□□ -0.16
CNN3-201ENST00000370206 C16orf90A8MZG2 172 aa14.02□□□□□ -0.16
CNN3-201ENST00000370206 PSCAO43653 123 aa14.02□□□□□ -0.17
CNN3-201ENST00000370206 TMEM258P61165 79 aa14.02□□□□□ -0.17
CNN3-201ENST00000370206 UBE2BP63146 152 aa14.02□□□□□ -0.17
CNN3-201ENST00000370206 C3orf84H3BNL1 204 aa14.01□□□□□ -0.17
CNN3-201ENST00000370206 A0A1B0GW54 56 aa13.99□□□□□ -0.17
CNN3-201ENST00000370206 FUSP35637 526 aaKnown RBP eCLIP13.99□□□□□ -0.17
CNN3-201ENST00000370206 A0A1W2PNM2 257 aa13.98□□□□□ -0.17
CNN3-201ENST00000370206 STAB2Q8WWQ8 2551 aa13.98□□□□□ -0.17
CNN3-201ENST00000370206 C1orf137Q5JT78 98 aa13.98□□□□□ -0.17
CNN3-201ENST00000370206 IGKV2-24A0A0C4DH68 120 aa13.97□□□□□ -0.17
CNN3-201ENST00000370206 C20orf197Q8N268 126 aa13.96□□□□□ -0.17
CNN3-201ENST00000370206 B9D2Q9BPU9 175 aa13.96□□□□□ -0.18
CNN3-201ENST00000370206 A0A1W2PNN7 141 aa13.95□□□□□ -0.18
CNN3-201ENST00000370206 IGKV4-1P06312 121 aa13.95□□□□□ -0.18
CNN3-201ENST00000370206 C14orf177Q52M58 125 aa13.95□□□□□ -0.18
CNN3-201ENST00000370206 Q8NBF4 154 aa13.95□□□□□ -0.18
CNN3-201ENST00000370206 BPY2O14599 106 aa13.94□□□□□ -0.18
CNN3-201ENST00000370206 Q8N9L7 120 aa13.93□□□□□ -0.18
CNN3-201ENST00000370206 DNAH9Q9NYC9 4486 aa13.92□□□□□ -0.18
CNN3-201ENST00000370206 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.91□□□□□ -0.18
CNN3-201ENST00000370206 J3KT08 172 aa13.9□□□□□ -0.18
CNN3-201ENST00000370206 SMIM29Q86T20 159 aa13.9□□□□□ -0.18
CNN3-201ENST00000370206 SPRR4Q96PI1 79 aa13.9□□□□□ -0.18
CNN3-201ENST00000370206 MDFIQ99750 246 aa13.9□□□□□ -0.18
CNN3-201ENST00000370206 COL7A1Q02388 2944 aa13.9□□□□□ -0.19
CNN3-201ENST00000370206 RPS28P62857 69 aaKnown RBP13.88□□□□□ -0.19
CNN3-201ENST00000370206 PRLHP81277 87 aa13.87□□□□□ -0.19
CNN3-201ENST00000370206 KLKP1Q107X0 134 aa13.86□□□□□ -0.19
CNN3-201ENST00000370206 DPH3Q96FX2 82 aa13.86□□□□□ -0.19
CNN3-201ENST00000370206 DNAH10Q8IVF4 4471 aa13.86□□□□□ -0.19
CNN3-201ENST00000370206 F8WEM9 126 aa13.84□□□□□ -0.19
CNN3-201ENST00000370206 CHTF8P0CG12 524 aa13.84□□□□□ -0.19
CNN3-201ENST00000370206 LINC00476Q8WZB0 136 aa13.84□□□□□ -0.19
CNN3-201ENST00000370206 LRCOL1A6NCL2 159 aa13.83□□□□□ -0.2
CNN3-201ENST00000370206 DYNC2H1Q8NCM8 4307 aaKnown RBP13.83□□□□□ -0.2
CNN3-201ENST00000370206 NBDYA0A0U1RRE5 68 aa13.82□□□□□ -0.2
CNN3-201ENST00000370206 NUPR2A6NF83 97 aa13.82□□□□□ -0.2
CNN3-201ENST00000370206 C9orf163Q8N9P6 203 aa13.82□□□□□ -0.2
CNN3-201ENST00000370206 PHF5AQ7RTV0 110 aaKnown RBP13.81□□□□□ -0.2
CNN3-201ENST00000370206 H7BZZ5 65 aa13.81□□□□□ -0.2
CNN3-201ENST00000370206 LYSTQ99698 3801 aa13.81□□□□□ -0.2
CNN3-201ENST00000370206 HIGD2AQ9BW72 106 aa13.81□□□□□ -0.2
CNN3-201ENST00000370206 KRTAP11-1Q8IUC1 163 aa13.8□□□□□ -0.2
CNN3-201ENST00000370206 PKIGQ9Y2B9 76 aa13.79□□□□□ -0.2
CNN3-201ENST00000370206 SNURFQ9Y675 71 aa13.79□□□□□ -0.2
CNN3-201ENST00000370206 IGLV8-61A0A075B6I0 122 aa13.78□□□□□ -0.2
CNN3-201ENST00000370206 IGFL1Q6UW32 110 aa13.78□□□□□ -0.2
CNN3-201ENST00000370206 Q6ZRN7 208 aaPredicted RBP13.77□□□□□ -0.21
CNN3-201ENST00000370206 OCR1Q9BZK8 76 aa13.77□□□□□ -0.21
CNN3-201ENST00000370206 H0Y9J4 135 aa13.76□□□□□ -0.21
CNN3-201ENST00000370206 FAM236DA0A1B0GTK5 79 aa13.74□□□□□ -0.21
CNN3-201ENST00000370206 EPM2AB3EWF7 344 aa13.74□□□□□ -0.21
CNN3-201ENST00000370206 FAM236CP0DP71 79 aa13.74□□□□□ -0.21
CNN3-201ENST00000370206 A0A0G2JQZ4 141 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms