RNA–Protein interactions for RNA: ENST00000370126.1

RTCA-202, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-202ENST00000370126 GAGE2AQ6NT46 116 aa12.28□□□□□ -0.44
RTCA-202ENST00000370126 FP248Q71RG6 208 aaPredicted RBP12.28□□□□□ -0.44
RTCA-202ENST00000370126 NDUFC2O95298 119 aa12.27□□□□□ -0.45
RTCA-202ENST00000370126 KRTDAPP60985 99 aa12.27□□□□□ -0.45
RTCA-202ENST00000370126 IGLV6-57P01721 117 aa12.26□□□□□ -0.45
RTCA-202ENST00000370126 C3orf79P0CE67 100 aa12.26□□□□□ -0.45
RTCA-202ENST00000370126 Q6ZRX8 168 aa12.26□□□□□ -0.45
RTCA-202ENST00000370126 Q9BRP9 147 aa12.26□□□□□ -0.45
RTCA-202ENST00000370126 SPINK1P00995 79 aa12.24□□□□□ -0.45
RTCA-202ENST00000370126 S100A7L2Q5SY68 101 aa12.24□□□□□ -0.45
RTCA-202ENST00000370126 SOSTDC1Q6X4U4 206 aa12.24□□□□□ -0.45
RTCA-202ENST00000370126 A0A0J9YXY3 114 aa12.23□□□□□ -0.45
RTCA-202ENST00000370126 EIF4EBP3O60516 100 aaPredicted RBP12.22□□□□□ -0.45
RTCA-202ENST00000370126 S100A6P06703 90 aa12.22□□□□□ -0.45
RTCA-202ENST00000370126 S100A2P29034 98 aa12.22□□□□□ -0.45
RTCA-202ENST00000370126 MOBPQ13875 183 aa12.22□□□□□ -0.45
RTCA-202ENST00000370126 ADAMTSL4-AS1Q5T5F5 129 aa12.22□□□□□ -0.45
RTCA-202ENST00000370126 TRAV23DV6A0A075B6W5 121 aa12.21□□□□□ -0.45
RTCA-202ENST00000370126 IGLV9-49A0A0B4J1Y8 123 aa12.21□□□□□ -0.45
RTCA-202ENST00000370126 NPC2P61916 151 aa12.21□□□□□ -0.45
RTCA-202ENST00000370126 LCE2AQ5TA79 106 aaPredicted RBP12.19□□□□□ -0.46
RTCA-202ENST00000370126 SSBP3-AS1Q7Z2R9 100 aa12.19□□□□□ -0.46
RTCA-202ENST00000370126 KRTAP13-3Q3SY46 172 aa12.18□□□□□ -0.46
RTCA-202ENST00000370126 ZNF73O43830 326 aaPredicted RBP12.17□□□□□ -0.46
RTCA-202ENST00000370126 JOSD1Q15040 202 aaPredicted RBP12.17□□□□□ -0.46
RTCA-202ENST00000370126 RPS29P62273 56 aaKnown RBP12.16□□□□□ -0.46
RTCA-202ENST00000370126 ZNF815PA8K554 130 aa12.15□□□□□ -0.46
RTCA-202ENST00000370126 TIMM17BO60830 172 aa12.14□□□□□ -0.47
RTCA-202ENST00000370126 SNRPEP62304 92 aaKnown RBP12.14□□□□□ -0.47
RTCA-202ENST00000370126 LITAFQ99732 161 aa12.14□□□□□ -0.47
RTCA-202ENST00000370126 HIST3H2BBQ8N257 126 aa12.13□□□□□ -0.47
RTCA-202ENST00000370126 Q8N377 158 aa12.13□□□□□ -0.47
RTCA-202ENST00000370126 SPANXCQ9NY87 97 aa12.12□□□□□ -0.47
RTCA-202ENST00000370126 ST20-AS1Q8NBB2 130 aa12.11□□□□□ -0.47
RTCA-202ENST00000370126 LINC00308Q8TCZ7 52 aa12.11□□□□□ -0.47
RTCA-202ENST00000370126 HIST1H2BLQ99880 126 aa12.11□□□□□ -0.47
RTCA-202ENST00000370126 TMA7Q9Y2S6 64 aaKnown RBP12.11□□□□□ -0.47
RTCA-202ENST00000370126 CBY1Q9Y3M2 126 aa12.11□□□□□ -0.47
RTCA-202ENST00000370126 COPS9Q8WXC6 57 aa12.1□□□□□ -0.47
RTCA-202ENST00000370126 C5orf52A6NGY3 159 aa12.09□□□□□ -0.47
RTCA-202ENST00000370126 C9orf153Q5TBE3 101 aa12.09□□□□□ -0.47
RTCA-202ENST00000370126 SCGB1D4Q6XE38 83 aa12.09□□□□□ -0.47
RTCA-202ENST00000370126 SLC25A20O43772 301 aa12.08□□□□□ -0.48
RTCA-202ENST00000370126 HINT1P49773 126 aaPredicted RBP12.08□□□□□ -0.48
RTCA-202ENST00000370126 HSBP1L1C9JCN9 74 aa12.07□□□□□ -0.48
RTCA-202ENST00000370126 ASB16-AS1Q495Z4 193 aa12.07□□□□□ -0.48
RTCA-202ENST00000370126 ATOH7Q8N100 152 aa12.07□□□□□ -0.48
RTCA-202ENST00000370126 OR13C6PQ8NH95 151 aa12.06□□□□□ -0.48
RTCA-202ENST00000370126 TTTY13Q9BZ97 58 aa12.05□□□□□ -0.48
RTCA-202ENST00000370126 SPANXDQ9BXN6 97 aa12.04□□□□□ -0.48
RTCA-202ENST00000370126 ANKRD39Q53RE8 183 aa12.03□□□□□ -0.48
RTCA-202ENST00000370126 SPRR1BP22528 89 aa12.02□□□□□ -0.49
RTCA-202ENST00000370126 Q6ZVH6 145 aa12.02□□□□□ -0.49
RTCA-202ENST00000370126 KRTAP9-2Q9BYQ4 174 aa12.02□□□□□ -0.49
RTCA-202ENST00000370126 DHRS4-AS1Q9P1J3 65 aa12.02□□□□□ -0.49
RTCA-202ENST00000370126 LINC00518Q8N0U6 118 aa12.01□□□□□ -0.49
RTCA-202ENST00000370126 IFITM1P13164 125 aa11.99□□□□□ -0.49
RTCA-202ENST00000370126 SEC61BP60468 96 aaKnown RBP11.99□□□□□ -0.49
RTCA-202ENST00000370126 ELOF1P60002 83 aaKnown RBP11.98□□□□□ -0.49
RTCA-202ENST00000370126 SLC25A34Q6PIV7 304 aa11.98□□□□□ -0.49
RTCA-202ENST00000370126 SCGB1D1O95968 90 aa11.97□□□□□ -0.49
RTCA-202ENST00000370126 C6orf99Q4VX62 202 aa11.97□□□□□ -0.49
RTCA-202ENST00000370126 KRTAP4-1Q9BYQ7 146 aa11.97□□□□□ -0.49
RTCA-202ENST00000370126 COX7BP24311 80 aa11.96□□□□□ -0.49
RTCA-202ENST00000370126 PCP2Q8IVA1 136 aa11.96□□□□□ -0.49
RTCA-202ENST00000370126 XP32Q5T750 250 aa11.95□□□□□ -0.5
RTCA-202ENST00000370126 LAMTOR3Q9UHA4 124 aa11.94□□□□□ -0.5
RTCA-202ENST00000370126 LIMD2Q9BT23 127 aa11.92□□□□□ -0.5
RTCA-202ENST00000370126 HRCT1Q6UXD1 115 aa11.9□□□□□ -0.5
RTCA-202ENST00000370126 TRBV7-6A0A0J9YX20 115 aa11.89□□□□□ -0.51
RTCA-202ENST00000370126 TAL2Q16559 108 aa11.88□□□□□ -0.51
RTCA-202ENST00000370126 Q1RN00 199 aa11.87□□□□□ -0.51
RTCA-202ENST00000370126 MUSTN1Q8IVN3 82 aa11.87□□□□□ -0.51
RTCA-202ENST00000370126 DEFB105AQ8NG35 78 aa11.87□□□□□ -0.51
RTCA-202ENST00000370126 TEX49A0A1B0GTD5 131 aa11.86□□□□□ -0.51
RTCA-202ENST00000370126 A0A1B0GWB2 263 aa11.85□□□□□ -0.51
RTCA-202ENST00000370126 A6NDN8 102 aa11.85□□□□□ -0.51
RTCA-202ENST00000370126 TRAV13-2A0A0B4J235 113 aa11.84□□□□□ -0.51
RTCA-202ENST00000370126 LINC01547P58512 204 aaPredicted RBP11.84□□□□□ -0.51
RTCA-202ENST00000370126 CD164Q04900 197 aa11.84□□□□□ -0.51
RTCA-202ENST00000370126 SMIM29Q86T20 159 aa11.83□□□□□ -0.52
RTCA-202ENST00000370126 PRO1933Q9H354 126 aa11.83□□□□□ -0.52
RTCA-202ENST00000370126 IGLV5-48A0A075B6I7 105 aa11.81□□□□□ -0.52
RTCA-202ENST00000370126 COX8AP10176 69 aa11.8□□□□□ -0.52
RTCA-202ENST00000370126 H7C2G1 150 aa11.78□□□□□ -0.52
RTCA-202ENST00000370126 DLEU1O43261 78 aa11.78□□□□□ -0.52
RTCA-202ENST00000370126 A4D1N5 150 aa11.77□□□□□ -0.53
RTCA-202ENST00000370126 C9orf92A6NGG3 77 aa11.77□□□□□ -0.53
RTCA-202ENST00000370126 VAMP8Q9BV40 100 aa11.77□□□□□ -0.53
RTCA-202ENST00000370126 Q5XG85 94 aa11.76□□□□□ -0.53
RTCA-202ENST00000370126 HIST1H4GQ99525 98 aa11.76□□□□□ -0.53
RTCA-202ENST00000370126 SMIM11BQ8TCY0 68 aa11.75□□□□□ -0.53
RTCA-202ENST00000370126 SPATA45Q537H7 98 aa11.74□□□□□ -0.53
RTCA-202ENST00000370126 NHP2Q9NX24 153 aaKnown RBP11.74□□□□□ -0.53
RTCA-202ENST00000370126 PAM16Q9Y3D7 125 aa11.74□□□□□ -0.53
RTCA-202ENST00000370126 VAMP3Q15836 100 aa11.73□□□□□ -0.53
RTCA-202ENST00000370126 A0A0G2JQZ4 141 aa11.72□□□□□ -0.53
RTCA-202ENST00000370126 PCOTHQ58A44 107 aa11.72□□□□□ -0.53
RTCA-202ENST00000370126 LCE2CQ5TA81 110 aa11.7□□□□□ -0.54
RTCA-202ENST00000370126 C1orf195Q5TG92 126 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms