RNA–Protein interactions for RNA: ENST00000369937.4

CUEDC2-201, Transcript of CUE domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC2, Length 1,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2-201ENST00000369937 HIST1H2BHQ93079 126 aa11.67□□□□□ -0.54
CUEDC2-201ENST00000369937 HIST1H2BNQ99877 126 aa11.67□□□□□ -0.54
CUEDC2-201ENST00000369937 HIST1H2BMQ99879 126 aa11.67□□□□□ -0.54
CUEDC2-201ENST00000369937 HINT1P49773 126 aaPredicted RBP11.66□□□□□ -0.54
CUEDC2-201ENST00000369937 ADAMTSL4-AS1Q5T5F5 129 aa11.66□□□□□ -0.54
CUEDC2-201ENST00000369937 FP248Q71RG6 208 aaPredicted RBP11.66□□□□□ -0.54
CUEDC2-201ENST00000369937 ERC2-IT1O76042 136 aa11.65□□□□□ -0.54
CUEDC2-201ENST00000369937 MOBPQ13875 183 aa11.65□□□□□ -0.54
CUEDC2-201ENST00000369937 Q9BRP9 147 aa11.65□□□□□ -0.54
CUEDC2-201ENST00000369937 ZNF73O43830 326 aaPredicted RBP11.64□□□□□ -0.55
CUEDC2-201ENST00000369937 SOSTDC1Q6X4U4 206 aa11.64□□□□□ -0.55
CUEDC2-201ENST00000369937 PET117Q6UWS5 81 aa11.63□□□□□ -0.55
CUEDC2-201ENST00000369937 SSBP3-AS1Q7Z2R9 100 aa11.63□□□□□ -0.55
CUEDC2-201ENST00000369937 OR13C6PQ8NH95 151 aa11.62□□□□□ -0.55
CUEDC2-201ENST00000369937 LINC01545Q5VT33 79 aa11.61□□□□□ -0.55
CUEDC2-201ENST00000369937 SPANXCQ9NY87 97 aa11.61□□□□□ -0.55
CUEDC2-201ENST00000369937 EIF4EBP3O60516 100 aaPredicted RBP11.6□□□□□ -0.55
CUEDC2-201ENST00000369937 LINC00308Q8TCZ7 52 aa11.6□□□□□ -0.55
CUEDC2-201ENST00000369937 ZNF815PA8K554 130 aa11.59□□□□□ -0.55
CUEDC2-201ENST00000369937 TIMM17BO60830 172 aa11.59□□□□□ -0.55
CUEDC2-201ENST00000369937 C9orf153Q5TBE3 101 aa11.58□□□□□ -0.56
CUEDC2-201ENST00000369937 LITAFQ99732 161 aa11.56□□□□□ -0.56
CUEDC2-201ENST00000369937 C5orf52A6NGY3 159 aa11.55□□□□□ -0.56
CUEDC2-201ENST00000369937 C3orf79P0CE67 100 aa11.55□□□□□ -0.56
CUEDC2-201ENST00000369937 KRTDAPP60985 99 aa11.55□□□□□ -0.56
CUEDC2-201ENST00000369937 RPS29P62273 56 aaKnown RBP11.55□□□□□ -0.56
CUEDC2-201ENST00000369937 SLC25A20O43772 301 aa11.53□□□□□ -0.56
CUEDC2-201ENST00000369937 LINC00518Q8N0U6 118 aa11.53□□□□□ -0.56
CUEDC2-201ENST00000369937 ST20-AS1Q8NBB2 130 aa11.53□□□□□ -0.56
CUEDC2-201ENST00000369937 SPANXDQ9BXN6 97 aa11.53□□□□□ -0.56
CUEDC2-201ENST00000369937 C20orf202A1L168 122 aa11.52□□□□□ -0.57
CUEDC2-201ENST00000369937 SCGB1D4Q6XE38 83 aa11.52□□□□□ -0.57
CUEDC2-201ENST00000369937 DHRS4-AS1Q9P1J3 65 aa11.52□□□□□ -0.57
CUEDC2-201ENST00000369937 SLC25A34Q6PIV7 304 aa11.51□□□□□ -0.57
CUEDC2-201ENST00000369937 TTTY13Q9BZ97 58 aa11.51□□□□□ -0.57
CUEDC2-201ENST00000369937 KRTAP13-3Q3SY46 172 aa11.5□□□□□ -0.57
CUEDC2-201ENST00000369937 Q8N377 158 aa11.5□□□□□ -0.57
CUEDC2-201ENST00000369937 MUC17Q685J3 4493 aa11.5□□□□□ -0.57
CUEDC2-201ENST00000369937 COPS9Q8WXC6 57 aa11.49□□□□□ -0.57
CUEDC2-201ENST00000369937 COA6Q5JTJ3 125 aaKnown RBP11.48□□□□□ -0.57
CUEDC2-201ENST00000369937 COX7BP24311 80 aa11.47□□□□□ -0.57
CUEDC2-201ENST00000369937 AKR1D1P51857 326 aa11.45□□□□□ -0.58
CUEDC2-201ENST00000369937 C6orf99Q4VX62 202 aa11.45□□□□□ -0.58
CUEDC2-201ENST00000369937 LAMTOR3Q9UHA4 124 aa11.45□□□□□ -0.58
CUEDC2-201ENST00000369937 SPRR1BP22528 89 aa11.43□□□□□ -0.58
CUEDC2-201ENST00000369937 ELOF1P60002 83 aaKnown RBP11.43□□□□□ -0.58
CUEDC2-201ENST00000369937 TAL2Q16559 108 aa11.43□□□□□ -0.58
CUEDC2-201ENST00000369937 IFITM1P13164 125 aa11.42□□□□□ -0.58
CUEDC2-201ENST00000369937 A6NDN8 102 aa11.41□□□□□ -0.58
CUEDC2-201ENST00000369937 SEC61BP60468 96 aaKnown RBP11.41□□□□□ -0.58
CUEDC2-201ENST00000369937 ATOH7Q8N100 152 aa11.41□□□□□ -0.58
CUEDC2-201ENST00000369937 ASB16-AS1Q495Z4 193 aa11.4□□□□□ -0.58
CUEDC2-201ENST00000369937 ANKRD39Q53RE8 183 aa11.4□□□□□ -0.58
CUEDC2-201ENST00000369937 Q6ZVH6 145 aa11.4□□□□□ -0.58
CUEDC2-201ENST00000369937 DEFB105AQ8NG35 78 aa11.4□□□□□ -0.58
CUEDC2-201ENST00000369937 LIMD2Q9BT23 127 aa11.4□□□□□ -0.58
CUEDC2-201ENST00000369937 HRCT1Q6UXD1 115 aa11.39□□□□□ -0.59
CUEDC2-201ENST00000369937 TRBV7-6A0A0J9YX20 115 aa11.38□□□□□ -0.59
CUEDC2-201ENST00000369937 FAT4Q6V0I7 4981 aa11.38□□□□□ -0.59
CUEDC2-201ENST00000369937 TEX49A0A1B0GTD5 131 aa11.36□□□□□ -0.59
CUEDC2-201ENST00000369937 A0A1B0GWB2 263 aa11.36□□□□□ -0.59
CUEDC2-201ENST00000369937 MUSTN1Q8IVN3 82 aa11.36□□□□□ -0.59
CUEDC2-201ENST00000369937 SNRPEP62304 92 aaKnown RBP11.35□□□□□ -0.59
CUEDC2-201ENST00000369937 Q1RN00 199 aa11.35□□□□□ -0.59
CUEDC2-201ENST00000369937 LCE2AQ5TA79 106 aaPredicted RBP11.35□□□□□ -0.59
CUEDC2-201ENST00000369937 PCP2Q8IVA1 136 aa11.35□□□□□ -0.59
CUEDC2-201ENST00000369937 PRO1933Q9H354 126 aa11.33□□□□□ -0.6
CUEDC2-201ENST00000369937 TRAV13-2A0A0B4J235 113 aa11.32□□□□□ -0.6
CUEDC2-201ENST00000369937 A4D1N5 150 aa11.31□□□□□ -0.6
CUEDC2-201ENST00000369937 S100A2P29034 98 aa11.31□□□□□ -0.6
CUEDC2-201ENST00000369937 NHP2Q9NX24 153 aaKnown RBP11.3□□□□□ -0.6
CUEDC2-201ENST00000369937 XP32Q5T750 250 aa11.29□□□□□ -0.6
CUEDC2-201ENST00000369937 HSBP1L1C9JCN9 74 aa11.28□□□□□ -0.6
CUEDC2-201ENST00000369937 H7C2G1 150 aa11.28□□□□□ -0.6
CUEDC2-201ENST00000369937 CD164Q04900 197 aa11.28□□□□□ -0.6
CUEDC2-201ENST00000369937 LINC01547P58512 204 aaPredicted RBP11.25□□□□□ -0.61
CUEDC2-201ENST00000369937 VAMP3Q15836 100 aa11.25□□□□□ -0.61
CUEDC2-201ENST00000369937 SMIM11BQ8TCY0 68 aa11.25□□□□□ -0.61
CUEDC2-201ENST00000369937 IGLV5-48A0A075B6I7 105 aa11.24□□□□□ -0.61
CUEDC2-201ENST00000369937 SMIM29Q86T20 159 aa11.23□□□□□ -0.61
CUEDC2-201ENST00000369937 HIST3H2BBQ8N257 126 aa11.23□□□□□ -0.61
CUEDC2-201ENST00000369937 HIST1H2BLQ99880 126 aa11.23□□□□□ -0.61
CUEDC2-201ENST00000369937 S100A6P06703 90 aa11.22□□□□□ -0.61
CUEDC2-201ENST00000369937 C9orf92A6NGG3 77 aa11.21□□□□□ -0.61
CUEDC2-201ENST00000369937 KRTAP9-2Q9BYQ4 174 aa11.2□□□□□ -0.62
CUEDC2-201ENST00000369937 KRTAP4-1Q9BYQ7 146 aa11.2□□□□□ -0.62
CUEDC2-201ENST00000369937 F8WEM9 126 aa11.18□□□□□ -0.62
CUEDC2-201ENST00000369937 Q5XG85 94 aa11.17□□□□□ -0.62
CUEDC2-201ENST00000369937 S100A1P23297 94 aa11.16□□□□□ -0.62
CUEDC2-201ENST00000369937 A0A0G2JQZ4 141 aa11.14□□□□□ -0.63
CUEDC2-201ENST00000369937 TCL1BO95988 128 aa11.13□□□□□ -0.63
CUEDC2-201ENST00000369937 LINC00575Q6W349 94 aa11.13□□□□□ -0.63
CUEDC2-201ENST00000369937 hADV29S1A0JD25 119 aa11.12□□□□□ -0.63
CUEDC2-201ENST00000369937 SCGB1D1O95968 90 aa11.12□□□□□ -0.63
CUEDC2-201ENST00000369937 C1orf195Q5TG92 126 aa11.12□□□□□ -0.63
CUEDC2-201ENST00000369937 PCOTHQ58A44 107 aa11.11□□□□□ -0.63
CUEDC2-201ENST00000369937 HIST1H4GQ99525 98 aa11.11□□□□□ -0.63
CUEDC2-201ENST00000369937 IGLV8-61A0A075B6I0 122 aa11.1□□□□□ -0.63
CUEDC2-201ENST00000369937 Q6ZQY7 126 aa11.1□□□□□ -0.63
CUEDC2-201ENST00000369937 BVES-AS1Q5T3Y7 98 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms