RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 LINC00528Q8N1L1 170 aa11.74□□□□□ -0.53
SNX27-203ENST00000368843 A0A1B0GVX0 72 aa11.74□□□□□ -0.53
SNX27-203ENST00000368843 USP9XQ93008 2570 aaPredicted RBP11.73□□□□□ -0.53
SNX27-203ENST00000368843 LINC00336Q6ZUF6 198 aa11.73□□□□□ -0.53
SNX27-203ENST00000368843 IGLV7-43P04211 117 aa11.73□□□□□ -0.53
SNX27-203ENST00000368843 PRR34Q9NV39 138 aa11.73□□□□□ -0.53
SNX27-203ENST00000368843 RBM12B-AS1Q9P1G2 102 aa11.72□□□□□ -0.53
SNX27-203ENST00000368843 A0A096LNT2 108 aa11.71□□□□□ -0.54
SNX27-203ENST00000368843 ZNF462Q96JM2 2506 aa11.7□□□□□ -0.54
SNX27-203ENST00000368843 GIG44P09565 113 aaPredicted RBP11.7□□□□□ -0.54
SNX27-203ENST00000368843 PRR15Q8IV56 129 aa11.7□□□□□ -0.54
SNX27-203ENST00000368843 EIF4EBP3O60516 100 aaPredicted RBP11.69□□□□□ -0.54
SNX27-203ENST00000368843 Q8N377 158 aa11.69□□□□□ -0.54
SNX27-203ENST00000368843 PSORS1C2Q9UIG4 136 aa11.69□□□□□ -0.54
SNX27-203ENST00000368843 C9orf163Q8N9P6 203 aa11.68□□□□□ -0.54
SNX27-203ENST00000368843 CASC10Q5T4H9 136 aa11.67□□□□□ -0.54
SNX27-203ENST00000368843 MIR22HGQ0VDD5 57 aa11.65□□□□□ -0.55
SNX27-203ENST00000368843 UQCR11O14957 56 aa11.64□□□□□ -0.55
SNX27-203ENST00000368843 CRIPTQ9P021 101 aa11.64□□□□□ -0.55
SNX27-203ENST00000368843 TLX1NBP0CAT3 122 aa11.64□□□□□ -0.55
SNX27-203ENST00000368843 Q8N1X5 172 aa11.64□□□□□ -0.55
SNX27-203ENST00000368843 PLA2G2DQ9UNK4 145 aa11.63□□□□□ -0.55
SNX27-203ENST00000368843 SETD2Q9BYW2 2564 aaPredicted RBP11.63□□□□□ -0.55
SNX27-203ENST00000368843 RPS28P62857 69 aaKnown RBP11.61□□□□□ -0.55
SNX27-203ENST00000368843 ZNF575Q86XF7 245 aa11.59□□□□□ -0.55
SNX27-203ENST00000368843 ERC2-IT1O76042 136 aa11.58□□□□□ -0.56
SNX27-203ENST00000368843 SPRR4Q96PI1 79 aa11.58□□□□□ -0.56
SNX27-203ENST00000368843 LINC00612Q8N6U2 182 aa11.58□□□□□ -0.56
SNX27-203ENST00000368843 SPTBN4Q9H254 2564 aa11.58□□□□□ -0.56
SNX27-203ENST00000368843 KRTAP1-3Q8IUG1 177 aa11.56□□□□□ -0.56
SNX27-203ENST00000368843 PKD1L2Q7Z442 2459 aa11.54□□□□□ -0.56
SNX27-203ENST00000368843 CNBPP62633 177 aaKnown RBP11.53□□□□□ -0.56
SNX27-203ENST00000368843 IGLV5-48A0A075B6I7 105 aa11.53□□□□□ -0.56
SNX27-203ENST00000368843 CEP295Q9C0D2 2601 aa11.51□□□□□ -0.57
SNX27-203ENST00000368843 CYP4F30PQ9H0H9 118 aa11.51□□□□□ -0.57
SNX27-203ENST00000368843 USP9YO00507 2555 aaPredicted RBP11.5□□□□□ -0.57
SNX27-203ENST00000368843 CHD8Q9HCK8 2581 aa11.5□□□□□ -0.57
SNX27-203ENST00000368843 TNP2Q05952 138 aa11.5□□□□□ -0.57
SNX27-203ENST00000368843 ACANP16112 2415 aa11.48□□□□□ -0.57
SNX27-203ENST00000368843 Q6ZSA8 131 aa11.47□□□□□ -0.57
SNX27-203ENST00000368843 KRTAP1-1Q07627 177 aa11.46□□□□□ -0.57
SNX27-203ENST00000368843 MTORP42345 2549 aa11.46□□□□□ -0.57
SNX27-203ENST00000368843 POLQO75417 2590 aa11.46□□□□□ -0.58
SNX27-203ENST00000368843 M0R2T5 61 aa11.43□□□□□ -0.58
SNX27-203ENST00000368843 F8P00451 2351 aa11.42□□□□□ -0.58
SNX27-203ENST00000368843 FAM104AQ969W3 186 aa11.42□□□□□ -0.58
SNX27-203ENST00000368843 IGLV7-46A0A075B6I9 117 aa11.39□□□□□ -0.59
SNX27-203ENST00000368843 A0A1W2PNM2 257 aa11.39□□□□□ -0.59
SNX27-203ENST00000368843 PRR26Q8N8Z3 221 aa11.38□□□□□ -0.59
SNX27-203ENST00000368843 UTRNP46939 3433 aa11.37□□□□□ -0.59
SNX27-203ENST00000368843 CDC42SE1Q9NRR8 79 aa11.36□□□□□ -0.59
SNX27-203ENST00000368843 FASNP49327 2511 aaKnown RBP11.34□□□□□ -0.59
SNX27-203ENST00000368843 KLKP1Q107X0 134 aa11.34□□□□□ -0.59
SNX27-203ENST00000368843 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.33□□□□□ -0.6
SNX27-203ENST00000368843 H7BZZ5 65 aa11.32□□□□□ -0.6
SNX27-203ENST00000368843 KTN1-AS1Q86SY8 53 aa11.25□□□□□ -0.61
SNX27-203ENST00000368843 CD164Q04900 197 aa11.25□□□□□ -0.61
SNX27-203ENST00000368843 CR1P17927 2039 aa11.25□□□□□ -0.61
SNX27-203ENST00000368843 CAMK2N1Q7Z7J9 78 aa11.24□□□□□ -0.61
SNX27-203ENST00000368843 SPANXA2-OT1Q8N9U9 137 aa11.22□□□□□ -0.61
SNX27-203ENST00000368843 DNAH12Q6ZR08 3092 aa11.22□□□□□ -0.61
SNX27-203ENST00000368843 WIPF1O43516 503 aa11.18□□□□□ -0.62
SNX27-203ENST00000368843 LCA10Q71F78 164 aa11.18□□□□□ -0.62
SNX27-203ENST00000368843 LUZP6Q538Z0 58 aa11.13□□□□□ -0.63
SNX27-203ENST00000368843 S4R3F8 94 aa11.12□□□□□ -0.63
SNX27-203ENST00000368843 FAM229BQ4G0N7 80 aa11.12□□□□□ -0.63
SNX27-203ENST00000368843 PLAC8Q9NZF1 115 aa11.1□□□□□ -0.63
SNX27-203ENST00000368843 HRES1P13985 223 aa11.09□□□□□ -0.63
SNX27-203ENST00000368843 LINC00483Q53H64 154 aa11.08□□□□□ -0.64
SNX27-203ENST00000368843 A0A1B0GU33 70 aa11.07□□□□□ -0.64
SNX27-203ENST00000368843 BPTFQ12830 3046 aa11.07□□□□□ -0.64
SNX27-203ENST00000368843 ZCCHC13Q8WW36 166 aaKnown RBP11.06□□□□□ -0.64
SNX27-203ENST00000368843 Q5VSD8 79 aa11.04□□□□□ -0.64
SNX27-203ENST00000368843 OCR1Q9BZK8 76 aa11.03□□□□□ -0.64
SNX27-203ENST00000368843 C5orf42Q9H799 3197 aa11.03□□□□□ -0.64
SNX27-203ENST00000368843 Q1T7F1 81 aa11.02□□□□□ -0.64
SNX27-203ENST00000368843 CSAG1Q6PB30 78 aa11.01□□□□□ -0.65
SNX27-203ENST00000368843 PRAC1Q96KF2 57 aa11.01□□□□□ -0.65
SNX27-203ENST00000368843 USP24Q9UPU5 2620 aa10.99□□□□□ -0.65
SNX27-203ENST00000368843 Q8N9P0 234 aaPredicted RBP10.98□□□□□ -0.65
SNX27-203ENST00000368843 HECTD1Q9ULT8 2610 aa10.96□□□□□ -0.66
SNX27-203ENST00000368843 MMP24-AS1A0A0U1RRL7 71 aa10.94□□□□□ -0.66
SNX27-203ENST00000368843 SEC61BP60468 96 aaKnown RBP10.93□□□□□ -0.66
SNX27-203ENST00000368843 EPG5Q9HCE0 2579 aa10.9□□□□□ -0.67
SNX27-203ENST00000368843 Q8NDZ9 215 aa10.89□□□□□ -0.67
SNX27-203ENST00000368843 SPINK7P58062 85 aa10.88□□□□□ -0.67
SNX27-203ENST00000368843 Q5W150 140 aa10.88□□□□□ -0.67
SNX27-203ENST00000368843 DMAC1Q96GE9 116 aa10.88□□□□□ -0.67
SNX27-203ENST00000368843 MGAM2Q2M2H8 2515 aa10.87□□□□□ -0.67
SNX27-203ENST00000368843 R4GN34 69 aa10.87□□□□□ -0.67
SNX27-203ENST00000368843 LCE6AA0A183 80 aa10.87□□□□□ -0.67
SNX27-203ENST00000368843 KRTAP10-1P60331 282 aa10.87□□□□□ -0.67
SNX27-203ENST00000368843 KRTAP1-5Q9BYS1 174 aa10.86□□□□□ -0.67
SNX27-203ENST00000368843 KRTAP10-2P60368 255 aa10.84□□□□□ -0.67
SNX27-203ENST00000368843 SPRR1AP35321 89 aa10.83□□□□□ -0.68
SNX27-203ENST00000368843 CYSTM1Q9H1C7 97 aa10.83□□□□□ -0.68
SNX27-203ENST00000368843 PCNTO95613 3336 aa10.82□□□□□ -0.68
SNX27-203ENST00000368843 PRRC2CQ9Y520 2896 aaKnown RBP10.82□□□□□ -0.68
SNX27-203ENST00000368843 Q75L30 129 aa10.8□□□□□ -0.68
SNX27-203ENST00000368843 FLNAP21333 2647 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms