RNA–Protein interactions for RNA: ENST00000365690.4

MIR539-201, microRNA 539, humanhuman

BASIC

Gene MIR539, Length 78 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR539-201ENST00000365690 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.74□□□□□ -2.69
MIR539-201ENST00000365690 CPSF1Q10570 1443 aaKnown RBP-1.74□□□□□ -2.69
MIR539-201ENST00000365690 SPEF2Q9C093 1822 aa-1.75□□□□□ -2.69
MIR539-201ENST00000365690 MYO15AQ9UKN7 3530 aa-1.75□□□□□ -2.69
MIR539-201ENST00000365690 DBIP07108 87 aaKnown RBP-1.75□□□□□ -2.69
MIR539-201ENST00000365690 IGLC2P0DOY2 106 aa-1.75□□□□□ -2.69
MIR539-201ENST00000365690 IGLC3P0DOY3 106 aa-1.75□□□□□ -2.69
MIR539-201ENST00000365690 S100GP29377 79 aa-1.75□□□□□ -2.69
MIR539-201ENST00000365690 DEFB136Q30KP8 78 aa-1.75□□□□□ -2.69
MIR539-201ENST00000365690 ANP32BQ92688 251 aaKnown RBP-1.75□□□□□ -2.69
MIR539-201ENST00000365690 DPH3Q96FX2 82 aa-1.75□□□□□ -2.69
MIR539-201ENST00000365690 PDCD10Q9BUL8 212 aa-1.75□□□□□ -2.69
MIR539-201ENST00000365690 NOP10Q9NPE3 64 aaKnown RBP-1.75□□□□□ -2.69
MIR539-201ENST00000365690 GID8Q9NWU2 228 aa-1.75□□□□□ -2.69
MIR539-201ENST00000365690 SERP1Q9Y6X1 66 aa-1.75□□□□□ -2.69
MIR539-201ENST00000365690 CUL7Q14999 1698 aa-1.75□□□□□ -2.69
MIR539-201ENST00000365690 TOGARAM1Q9Y4F4 1720 aa-1.75□□□□□ -2.69
MIR539-201ENST00000365690 LRRC9Q6ZRR7 1453 aa-1.75□□□□□ -2.69
MIR539-201ENST00000365690 TCHHQ07283 1943 aa-1.76□□□□□ -2.69
MIR539-201ENST00000365690 DEPDC5O75140 1603 aa-1.76□□□□□ -2.69
MIR539-201ENST00000365690 TARBP1Q13395 1621 aaKnown RBP-1.76□□□□□ -2.69
MIR539-201ENST00000365690 CCDC153Q494R4 210 aa-1.76□□□□□ -2.69
MIR539-201ENST00000365690 SKA2Q8WVK7 121 aaPredicted RBP-1.76□□□□□ -2.69
MIR539-201ENST00000365690 LSM10Q969L4 123 aaKnown RBP-1.76□□□□□ -2.69
MIR539-201ENST00000365690 PCBD2Q9H0N5 130 aa-1.76□□□□□ -2.69
MIR539-201ENST00000365690 RERGLQ9H628 205 aa-1.76□□□□□ -2.69
MIR539-201ENST00000365690 SPANXCQ9NY87 97 aa-1.76□□□□□ -2.69
MIR539-201ENST00000365690 PRUNE2Q8WUY3 3088 aa-1.76□□□□□ -2.69
MIR539-201ENST00000365690 SAMD9Q5K651 1589 aa-1.76□□□□□ -2.69
MIR539-201ENST00000365690 CRYBG1Q9Y4K1 1723 aa-1.77□□□□□ -2.69
MIR539-201ENST00000365690 TMEM218A2RU14 115 aa-1.77□□□□□ -2.69
MIR539-201ENST00000365690 TMEM262E9PQX1 116 aa-1.77□□□□□ -2.69
MIR539-201ENST00000365690 M0R2Z0 102 aa-1.77□□□□□ -2.69
MIR539-201ENST00000365690 WT1-ASQ06250 92 aa-1.77□□□□□ -2.69
MIR539-201ENST00000365690 SMCO1Q147U7 214 aa-1.77□□□□□ -2.69
MIR539-201ENST00000365690 C8orf59Q8N0T1 100 aaPredicted RBP-1.77□□□□□ -2.69
MIR539-201ENST00000365690 AIF1LQ9BQI0 150 aa-1.77□□□□□ -2.69
MIR539-201ENST00000365690 SMIM3Q9BZL3 60 aa-1.77□□□□□ -2.69
MIR539-201ENST00000365690 OVOS2A0A0J9YW53 1432 aa-1.77□□□□□ -2.69
MIR539-201ENST00000365690 OVOS2Q6IE36 1432 aa-1.77□□□□□ -2.69
MIR539-201ENST00000365690 TEX14Q8IWB6 1497 aa-1.77□□□□□ -2.69
MIR539-201ENST00000365690 MAST1Q9Y2H9 1570 aa-1.77□□□□□ -2.69
MIR539-201ENST00000365690 WIZO95785 1651 aa-1.77□□□□□ -2.69
MIR539-201ENST00000365690 M0QZ58 72 aa-1.78□□□□□ -2.69
MIR539-201ENST00000365690 TSPAN19P0C672 248 aa-1.78□□□□□ -2.69
MIR539-201ENST00000365690 PTMSP20962 102 aa-1.78□□□□□ -2.69
MIR539-201ENST00000365690 MORN2Q502X0 79 aa-1.78□□□□□ -2.69
MIR539-201ENST00000365690 C1orf54Q8WWF1 131 aa-1.78□□□□□ -2.69
MIR539-201ENST00000365690 GINS2Q9Y248 185 aa-1.78□□□□□ -2.69
MIR539-201ENST00000365690 MRC2Q9UBG0 1479 aa-1.78□□□□□ -2.69
MIR539-201ENST00000365690 RGPD3A6NKT7 1758 aaPredicted RBP-1.78□□□□□ -2.69
MIR539-201ENST00000365690 RGPD4Q7Z3J3 1758 aa-1.78□□□□□ -2.69
MIR539-201ENST00000365690 CEP152O94986 1710 aa-1.79□□□□□ -2.7
MIR539-201ENST00000365690 FAM135AQ9P2D6 1515 aa-1.79□□□□□ -2.7
MIR539-201ENST00000365690 MIF4GDA9UHW6 222 aaKnown RBP-1.79□□□□□ -2.7
MIR539-201ENST00000365690 M0QX08 132 aa-1.79□□□□□ -2.7
MIR539-201ENST00000365690 LEPROTL1O95214 131 aa-1.79□□□□□ -2.7
MIR539-201ENST00000365690 ACYP1P07311 99 aa-1.79□□□□□ -2.7
MIR539-201ENST00000365690 CATR1Q13166 79 aa-1.79□□□□□ -2.7
MIR539-201ENST00000365690 GAFA1Q96PS6 74 aa-1.79□□□□□ -2.7
MIR539-201ENST00000365690 CCDC167Q9P0B6 97 aa-1.79□□□□□ -2.7
MIR539-201ENST00000365690 GSKIPQ9P0R6 139 aa-1.79□□□□□ -2.7
MIR539-201ENST00000365690 LY75O60449 1722 aa-1.8□□□□□ -2.7
MIR539-201ENST00000365690 QSER1Q2KHR3 1735 aa-1.8□□□□□ -2.7
MIR539-201ENST00000365690 MON2Q7Z3U7 1717 aa-1.8□□□□□ -2.7
MIR539-201ENST00000365690 CFTRP13569 1480 aa-1.8□□□□□ -2.7
MIR539-201ENST00000365690 ROCK1Q13464 1354 aa-1.8□□□□□ -2.7
MIR539-201ENST00000365690 NAP1L6A6NFF2 107 aa-1.8□□□□□ -2.7
MIR539-201ENST00000365690 COPZ1P61923 177 aa-1.8□□□□□ -2.7
MIR539-201ENST00000365690 CGREF1Q99674 301 aa-1.8□□□□□ -2.7
MIR539-201ENST00000365690 HSPB11Q9Y547 144 aa-1.8□□□□□ -2.7
MIR539-201ENST00000365690 SHPRHQ149N8 1683 aa-1.8□□□□□ -2.7
MIR539-201ENST00000365690 SMARCA2P51531 1590 aa-1.81□□□□□ -2.7
MIR539-201ENST00000365690 A0A1B0GV72 72 aa-1.81□□□□□ -2.7
MIR539-201ENST00000365690 CRYM-AS1A6NIL9 109 aa-1.81□□□□□ -2.7
MIR539-201ENST00000365690 D6R8Y8 96 aa-1.81□□□□□ -2.7
MIR539-201ENST00000365690 M0QY20 66 aa-1.81□□□□□ -2.7
MIR539-201ENST00000365690 PMCHL1Q16048 86 aa-1.81□□□□□ -2.7
MIR539-201ENST00000365690 MUSTN1Q8IVN3 82 aa-1.81□□□□□ -2.7
MIR539-201ENST00000365690 PARP4Q9UKK3 1724 aaKnown RBP-1.81□□□□□ -2.7
MIR539-201ENST00000365690 C5P01031 1676 aa-1.81□□□□□ -2.7
MIR539-201ENST00000365690 TOP2BQ02880 1626 aa-1.81□□□□□ -2.7
MIR539-201ENST00000365690 TOPAZ1Q8N9V7 1692 aa-1.82□□□□□ -2.7
MIR539-201ENST00000365690 TSTD3H0UI37 97 aa-1.82□□□□□ -2.7
MIR539-201ENST00000365690 H3BUA1 57 aa-1.82□□□□□ -2.7
MIR539-201ENST00000365690 APOC2P02655 101 aa-1.82□□□□□ -2.7
MIR539-201ENST00000365690 BVES-AS1Q5T3Y7 98 aa-1.82□□□□□ -2.7
MIR539-201ENST00000365690 ALKAL2Q6UX46 152 aa-1.82□□□□□ -2.7
MIR539-201ENST00000365690 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.82□□□□□ -2.7
MIR539-201ENST00000365690 LEAP2Q969E1 77 aa-1.82□□□□□ -2.7
MIR539-201ENST00000365690 SPANXA1Q9NS26 97 aa-1.82□□□□□ -2.7
MIR539-201ENST00000365690 ANKRD36BQ8N2N9 1353 aa-1.83□□□□□ -2.7
MIR539-201ENST00000365690 IQCF6A8MYZ5 107 aa-1.83□□□□□ -2.7
MIR539-201ENST00000365690 G0S2P27469 103 aa-1.83□□□□□ -2.7
MIR539-201ENST00000365690 RPS25P62851 125 aaKnown RBP-1.83□□□□□ -2.7
MIR539-201ENST00000365690 PFDN5Q99471 154 aa-1.83□□□□□ -2.7
MIR539-201ENST00000365690 TRBV25-1A0A075B6N4 114 aa-1.84□□□□□ -2.7
MIR539-201ENST00000365690 ATP5EP56381 51 aaPredicted RBP-1.84□□□□□ -2.7
MIR539-201ENST00000365690 CCDC58Q4VC31 144 aa-1.84□□□□□ -2.7
MIR539-201ENST00000365690 TSTD1Q8NFU3 115 aa-1.84□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms