RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 SDK1Q7Z5N4 2213 aa0.95□□□□□ -2.26
RNU4-42P-201ENST00000364738 IGLV5-48A0A075B6I7 105 aa0.95□□□□□ -2.26
RNU4-42P-201ENST00000364738 A0A096LNT2 108 aa0.95□□□□□ -2.26
RNU4-42P-201ENST00000364738 LYNX1G3V0Z9 82 aa0.95□□□□□ -2.26
RNU4-42P-201ENST00000364738 K7EQZ3 153 aa0.95□□□□□ -2.26
RNU4-42P-201ENST00000364738 PRB3Q04118 309 aaPredicted RBP0.95□□□□□ -2.26
RNU4-42P-201ENST00000364738 WT1-ASQ06250 92 aa0.95□□□□□ -2.26
RNU4-42P-201ENST00000364738 KRTAP6-3Q3LI67 103 aa0.95□□□□□ -2.26
RNU4-42P-201ENST00000364738 SSBP3-AS1Q7Z2R9 100 aa0.95□□□□□ -2.26
RNU4-42P-201ENST00000364738 LEAP2Q969E1 77 aa0.95□□□□□ -2.26
RNU4-42P-201ENST00000364738 CCL26Q9Y258 94 aa0.95□□□□□ -2.26
RNU4-42P-201ENST00000364738 R4GN34 69 aa0.95□□□□□ -2.26
RNU4-42P-201ENST00000364738 ABCA4P78363 2273 aa0.95□□□□□ -2.26
RNU4-42P-201ENST00000364738 UNC13CQ8NB66 2214 aa0.95□□□□□ -2.26
RNU4-42P-201ENST00000364738 I3L2K1 104 aa0.94□□□□□ -2.26
RNU4-42P-201ENST00000364738 K7EIM0 57 aa0.94□□□□□ -2.26
RNU4-42P-201ENST00000364738 INE1O15225 51 aa0.94□□□□□ -2.26
RNU4-42P-201ENST00000364738 RPL39P5Q59GN2 51 aa0.94□□□□□ -2.26
RNU4-42P-201ENST00000364738 C10orf55Q5SWW7 151 aa0.94□□□□□ -2.26
RNU4-42P-201ENST00000364738 MINOS1Q5TGZ0 78 aa0.94□□□□□ -2.26
RNU4-42P-201ENST00000364738 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.94□□□□□ -2.26
RNU4-42P-201ENST00000364738 PRO3102Q9H379 93 aa0.94□□□□□ -2.26
RNU4-42P-201ENST00000364738 C6orf48Q9UBA6 75 aa0.94□□□□□ -2.26
RNU4-42P-201ENST00000364738 F5P12259 2224 aa0.94□□□□□ -2.26
RNU4-42P-201ENST00000364738 KNTC1P50748 2209 aa0.94□□□□□ -2.26
RNU4-42P-201ENST00000364738 MED13LQ71F56 2210 aa0.93□□□□□ -2.26
RNU4-42P-201ENST00000364738 RP1P56715 2156 aa0.93□□□□□ -2.26
RNU4-42P-201ENST00000364738 IGKV2-24A0A0C4DH68 120 aa0.93□□□□□ -2.26
RNU4-42P-201ENST00000364738 DEFB108AA8MXU0 73 aa0.93□□□□□ -2.26
RNU4-42P-201ENST00000364738 COX6A2Q02221 97 aa0.93□□□□□ -2.26
RNU4-42P-201ENST00000364738 DEFB134Q4QY38 66 aa0.93□□□□□ -2.26
RNU4-42P-201ENST00000364738 COX6B2Q6YFQ2 88 aa0.93□□□□□ -2.26
RNU4-42P-201ENST00000364738 Q6ZRX8 168 aa0.93□□□□□ -2.26
RNU4-42P-201ENST00000364738 PLAC4Q8WY50 150 aa0.93□□□□□ -2.26
RNU4-42P-201ENST00000364738 CRIPTQ9P021 101 aa0.93□□□□□ -2.26
RNU4-42P-201ENST00000364738 PDE4DIPQ5VU43 2346 aa0.93□□□□□ -2.26
RNU4-42P-201ENST00000364738 ZFHX2Q9C0A1 2572 aaPredicted RBP0.93□□□□□ -2.26
RNU4-42P-201ENST00000364738 CADP27708 2225 aa0.92□□□□□ -2.26
RNU4-42P-201ENST00000364738 USF3Q68DE3 2245 aa0.92□□□□□ -2.26
RNU4-42P-201ENST00000364738 G3V318 75 aa0.92□□□□□ -2.26
RNU4-42P-201ENST00000364738 DEFB131AP59861 70 aa0.92□□□□□ -2.26
RNU4-42P-201ENST00000364738 PCOTHQ58A44 107 aa0.92□□□□□ -2.26
RNU4-42P-201ENST00000364738 WFDC10BQ8IUB3 73 aa0.92□□□□□ -2.26
RNU4-42P-201ENST00000364738 WFDC13Q8IUB5 93 aa0.92□□□□□ -2.26
RNU4-42P-201ENST00000364738 TOMM7Q9P0U1 55 aa0.92□□□□□ -2.26
RNU4-42P-201ENST00000364738 BPTFQ12830 3046 aa0.92□□□□□ -2.26
RNU4-42P-201ENST00000364738 ZFHX3Q15911 3703 aa0.91□□□□□ -2.26
RNU4-42P-201ENST00000364738 GVQW2A0A096LPI5 108 aaPredicted RBP0.91□□□□□ -2.26
RNU4-42P-201ENST00000364738 H0YGG7 62 aa0.91□□□□□ -2.26
RNU4-42P-201ENST00000364738 TPRXLQ17RH7 258 aa0.91□□□□□ -2.26
RNU4-42P-201ENST00000364738 C10orf99Q6UWK7 81 aa0.91□□□□□ -2.26
RNU4-42P-201ENST00000364738 SPACA4Q8TDM5 124 aa0.91□□□□□ -2.26
RNU4-42P-201ENST00000364738 COX14Q96I36 57 aa0.91□□□□□ -2.26
RNU4-42P-201ENST00000364738 USMG5Q96IX5 58 aa0.91□□□□□ -2.26
RNU4-42P-201ENST00000364738 MRPL34Q9BQ48 92 aaKnown RBP0.91□□□□□ -2.26
RNU4-42P-201ENST00000364738 SORL1Q92673 2214 aa0.91□□□□□ -2.26
RNU4-42P-201ENST00000364738 PTPRQQ9UMZ3 2332 aa0.9□□□□□ -2.26
RNU4-42P-201ENST00000364738 STATHP02808 62 aa0.9□□□□□ -2.27
RNU4-42P-201ENST00000364738 ANKRD17O75179 2603 aaKnown RBP0.9□□□□□ -2.27
RNU4-42P-201ENST00000364738 TECTAO75443 2155 aa0.9□□□□□ -2.27
RNU4-42P-201ENST00000364738 URB1O60287 2271 aaKnown RBP0.9□□□□□ -2.27
RNU4-42P-201ENST00000364738 RTTNQ86VV8 2226 aa0.89□□□□□ -2.27
RNU4-42P-201ENST00000364738 ASXL3Q9C0F0 2248 aa0.89□□□□□ -2.27
RNU4-42P-201ENST00000364738 BRWD1Q9NSI6 2320 aa0.89□□□□□ -2.27
RNU4-42P-201ENST00000364738 SPINK13Q1W4C9 94 aa0.89□□□□□ -2.27
RNU4-42P-201ENST00000364738 KLK9Q2XQG4 91 aa0.89□□□□□ -2.27
RNU4-42P-201ENST00000364738 DEFB104AQ8WTQ1 72 aa0.89□□□□□ -2.27
RNU4-42P-201ENST00000364738 KAAG1Q9UBP8 84 aa0.89□□□□□ -2.27
RNU4-42P-201ENST00000364738 MMP24-AS1A0A0U1RRL7 71 aa0.88□□□□□ -2.27
RNU4-42P-201ENST00000364738 H0YAA0 97 aa0.88□□□□□ -2.27
RNU4-42P-201ENST00000364738 KRTAP13-4Q3LI77 160 aa0.88□□□□□ -2.27
RNU4-42P-201ENST00000364738 Q6ZRN7 208 aaPredicted RBP0.88□□□□□ -2.27
RNU4-42P-201ENST00000364738 UBE2DNLQ8IWF7 75 aa0.88□□□□□ -2.27
RNU4-42P-201ENST00000364738 KNL1Q8NG31 2342 aa0.87□□□□□ -2.27
RNU4-42P-201ENST00000364738 A8MTW9 85 aa0.87□□□□□ -2.27
RNU4-42P-201ENST00000364738 H3BUA1 57 aa0.87□□□□□ -2.27
RNU4-42P-201ENST00000364738 RPL37P61927 97 aaKnown RBP0.87□□□□□ -2.27
RNU4-42P-201ENST00000364738 DEFB109BQ30KR1 87 aa0.87□□□□□ -2.27
RNU4-42P-201ENST00000364738 Q6ZSA8 131 aa0.87□□□□□ -2.27
RNU4-42P-201ENST00000364738 DOPEY2Q9Y3R5 2298 aa0.87□□□□□ -2.27
RNU4-42P-201ENST00000364738 ASCC3Q8N3C0 2202 aaKnown RBP0.87□□□□□ -2.27
RNU4-42P-201ENST00000364738 CNTRLQ7Z7A1 2325 aa0.86□□□□□ -2.27
RNU4-42P-201ENST00000364738 H1FX-AS1Q4G0G2 97 aa0.86□□□□□ -2.27
RNU4-42P-201ENST00000364738 CLPSL2Q6UWE3 100 aa0.86□□□□□ -2.27
RNU4-42P-201ENST00000364738 DEFB123Q8N688 67 aa0.86□□□□□ -2.27
RNU4-42P-201ENST00000364738 DEFB105AQ8NG35 78 aa0.86□□□□□ -2.27
RNU4-42P-201ENST00000364738 CNOT1A5YKK6 2376 aaKnown RBP0.85□□□□□ -2.27
RNU4-42P-201ENST00000364738 APELAP0DMC3 54 aa0.85□□□□□ -2.27
RNU4-42P-201ENST00000364738 DEFB130BP0DP73 79 aa0.85□□□□□ -2.27
RNU4-42P-201ENST00000364738 DEFB130AP0DP74 79 aa0.85□□□□□ -2.27
RNU4-42P-201ENST00000364738 UNQ6190/PRO20217Q6UXQ8 127 aa0.85□□□□□ -2.27
RNU4-42P-201ENST00000364738 NAV3Q8IVL0 2385 aa0.85□□□□□ -2.27
RNU4-42P-201ENST00000364738 AHCTF1Q8WYP5 2266 aa0.85□□□□□ -2.27
RNU4-42P-201ENST00000364738 ICE1Q9Y2F5 2266 aa0.84□□□□□ -2.27
RNU4-42P-201ENST00000364738 LYNX1P0DP58 116 aa0.84□□□□□ -2.27
RNU4-42P-201ENST00000364738 CACNA1EQ15878 2313 aa0.84□□□□□ -2.28
RNU4-42P-201ENST00000364738 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.84□□□□□ -2.28
RNU4-42P-201ENST00000364738 PLCE1Q9P212 2302 aa0.84□□□□□ -2.28
RNU4-42P-201ENST00000364738 TENM1Q9UKZ4 2725 aa0.84□□□□□ -2.28
RNU4-42P-201ENST00000364738 ABCA1O95477 2261 aa0.84□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms