RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 IGLV6-57P01721 117 aa7.27□□□□□ -1.25
CLIP1-203ENST00000361654 CSNK1G2-AS1Q8NCQ2 148 aa7.27□□□□□ -1.25
CLIP1-203ENST00000361654 LINC00528Q8N1L1 170 aa7.27□□□□□ -1.25
CLIP1-203ENST00000361654 OBSCN-AS1Q96MR7 158 aa7.26□□□□□ -1.25
CLIP1-203ENST00000361654 IGLV8-61A0A075B6I0 122 aa7.26□□□□□ -1.25
CLIP1-203ENST00000361654 IGLV7-43P04211 117 aa7.26□□□□□ -1.25
CLIP1-203ENST00000361654 FAM218AQ96MZ4 157 aa7.25□□□□□ -1.25
CLIP1-203ENST00000361654 DSCR10P59022 87 aa7.25□□□□□ -1.25
CLIP1-203ENST00000361654 SPINT4Q6UDR6 99 aa7.24□□□□□ -1.25
CLIP1-203ENST00000361654 LINC01600Q96MT4 127 aa7.24□□□□□ -1.25
CLIP1-203ENST00000361654 PRR34Q9NV39 138 aa7.24□□□□□ -1.25
CLIP1-203ENST00000361654 APLNQ9ULZ1 77 aa7.23□□□□□ -1.25
CLIP1-203ENST00000361654 ZNF575Q86XF7 245 aa7.22□□□□□ -1.25
CLIP1-203ENST00000361654 C8orf17Q9NRJ1 99 aa7.22□□□□□ -1.25
CLIP1-203ENST00000361654 LITAFQ99732 161 aa7.22□□□□□ -1.25
CLIP1-203ENST00000361654 A0A1B0GVX0 72 aa7.21□□□□□ -1.26
CLIP1-203ENST00000361654 TLX1NBP0CAT3 122 aa7.21□□□□□ -1.26
CLIP1-203ENST00000361654 CRIPTQ9P021 101 aa7.21□□□□□ -1.26
CLIP1-203ENST00000361654 MGAM2Q2M2H8 2515 aa7.21□□□□□ -1.26
CLIP1-203ENST00000361654 A0A096LNT2 108 aa7.2□□□□□ -1.26
CLIP1-203ENST00000361654 IGFL1Q6UW32 110 aa7.2□□□□□ -1.26
CLIP1-203ENST00000361654 C15orf56Q8N910 161 aa7.2□□□□□ -1.26
CLIP1-203ENST00000361654 PLA2G2DQ9UNK4 145 aa7.2□□□□□ -1.26
CLIP1-203ENST00000361654 PSORS1C2Q9UIG4 136 aa7.18□□□□□ -1.26
CLIP1-203ENST00000361654 COL27A1Q8IZC6 1860 aaPredicted RBP7.18□□□□□ -1.26
CLIP1-203ENST00000361654 UQCR11O14957 56 aa7.18□□□□□ -1.26
CLIP1-203ENST00000361654 KRTAP10-3P60369 221 aa7.18□□□□□ -1.26
CLIP1-203ENST00000361654 Q6ZSA8 131 aa7.18□□□□□ -1.26
CLIP1-203ENST00000361654 PRR15Q8IV56 129 aa7.18□□□□□ -1.26
CLIP1-203ENST00000361654 K7EQZ3 153 aa7.17□□□□□ -1.26
CLIP1-203ENST00000361654 CNBPP62633 177 aaKnown RBP7.17□□□□□ -1.26
CLIP1-203ENST00000361654 LINC00612Q8N6U2 182 aa7.17□□□□□ -1.26
CLIP1-203ENST00000361654 M0R2T5 61 aa7.16□□□□□ -1.26
CLIP1-203ENST00000361654 SPRR4Q96PI1 79 aa7.14□□□□□ -1.27
CLIP1-203ENST00000361654 EIF4EBP3O60516 100 aaPredicted RBP7.14□□□□□ -1.27
CLIP1-203ENST00000361654 HECTD1Q9ULT8 2610 aa7.14□□□□□ -1.27
CLIP1-203ENST00000361654 USP24Q9UPU5 2620 aa7.14□□□□□ -1.27
CLIP1-203ENST00000361654 C9orf129Q5T035 196 aaKnown RBP7.14□□□□□ -1.27
CLIP1-203ENST00000361654 LINC01554Q52M75 96 aa7.13□□□□□ -1.27
CLIP1-203ENST00000361654 IGLV7-46A0A075B6I9 117 aa7.12□□□□□ -1.27
CLIP1-203ENST00000361654 COA5Q86WW8 74 aa7.12□□□□□ -1.27
CLIP1-203ENST00000361654 ERC2-IT1O76042 136 aa7.12□□□□□ -1.27
CLIP1-203ENST00000361654 ANAPC11Q9NYG5 84 aa7.11□□□□□ -1.27
CLIP1-203ENST00000361654 GIG44P09565 113 aaPredicted RBP7.1□□□□□ -1.27
CLIP1-203ENST00000361654 CASC10Q5T4H9 136 aa7.1□□□□□ -1.27
CLIP1-203ENST00000361654 A0A1W2PNN7 141 aa7.1□□□□□ -1.27
CLIP1-203ENST00000361654 C5orf42Q9H799 3197 aa7.09□□□□□ -1.27
CLIP1-203ENST00000361654 TNP2Q05952 138 aa7.09□□□□□ -1.27
CLIP1-203ENST00000361654 Q8N377 158 aa7.09□□□□□ -1.27
CLIP1-203ENST00000361654 CYP4F30PQ9H0H9 118 aa7.09□□□□□ -1.28
CLIP1-203ENST00000361654 PCSK5Q92824 1860 aa7.07□□□□□ -1.28
CLIP1-203ENST00000361654 MIR22HGQ0VDD5 57 aa7.06□□□□□ -1.28
CLIP1-203ENST00000361654 KRTAP1-3Q8IUG1 177 aa7.06□□□□□ -1.28
CLIP1-203ENST00000361654 CD164Q04900 197 aa7.05□□□□□ -1.28
CLIP1-203ENST00000361654 MAST4O15021 2626 aa7.05□□□□□ -1.28
CLIP1-203ENST00000361654 KRTAP1-1Q07627 177 aa7.05□□□□□ -1.28
CLIP1-203ENST00000361654 IGLV5-48A0A075B6I7 105 aa7.04□□□□□ -1.28
CLIP1-203ENST00000361654 FAM104AQ969W3 186 aa7.02□□□□□ -1.29
CLIP1-203ENST00000361654 ATRQ13535 2644 aa7.02□□□□□ -1.29
CLIP1-203ENST00000361654 PRRC2CQ9Y520 2896 aaKnown RBP7.02□□□□□ -1.29
CLIP1-203ENST00000361654 CAMK2N1Q7Z7J9 78 aa7.01□□□□□ -1.29
CLIP1-203ENST00000361654 FAM229BQ4G0N7 80 aa7.01□□□□□ -1.29
CLIP1-203ENST00000361654 PRR26Q8N8Z3 221 aa7□□□□□ -1.29
CLIP1-203ENST00000361654 CDC42SE1Q9NRR8 79 aa7□□□□□ -1.29
CLIP1-203ENST00000361654 WIPF1O43516 503 aa6.99□□□□□ -1.29
CLIP1-203ENST00000361654 Q8N1X5 172 aa6.99□□□□□ -1.29
CLIP1-203ENST00000361654 H7BZZ5 65 aa6.99□□□□□ -1.29
CLIP1-203ENST00000361654 A0A0D9SG42 100 aa6.99□□□□□ -1.29
CLIP1-203ENST00000361654 A0A0G2JQZ4 141 aa6.98□□□□□ -1.29
CLIP1-203ENST00000361654 A8MUN3 132 aa6.97□□□□□ -1.29
CLIP1-203ENST00000361654 KLKP1Q107X0 134 aa6.97□□□□□ -1.29
CLIP1-203ENST00000361654 CHD7Q9P2D1 2997 aa6.96□□□□□ -1.29
CLIP1-203ENST00000361654 SEC61BP60468 96 aaKnown RBP6.96□□□□□ -1.3
CLIP1-203ENST00000361654 HRES1P13985 223 aa6.93□□□□□ -1.3
CLIP1-203ENST00000361654 A0A1W2PNM2 257 aa6.93□□□□□ -1.3
CLIP1-203ENST00000361654 CSAG1Q6PB30 78 aa6.93□□□□□ -1.3
CLIP1-203ENST00000361654 CYSTM1Q9H1C7 97 aa6.92□□□□□ -1.3
CLIP1-203ENST00000361654 LINC00483Q53H64 154 aa6.92□□□□□ -1.3
CLIP1-203ENST00000361654 STAB1Q9NY15 2570 aa6.92□□□□□ -1.3
CLIP1-203ENST00000361654 HTTP42858 3142 aa6.91□□□□□ -1.3
CLIP1-203ENST00000361654 LUZP6Q538Z0 58 aa6.91□□□□□ -1.3
CLIP1-203ENST00000361654 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.9□□□□□ -1.3
CLIP1-203ENST00000361654 MKI67P46013 3256 aaKnown RBP6.9□□□□□ -1.3
CLIP1-203ENST00000361654 Q5XG85 94 aa6.9□□□□□ -1.3
CLIP1-203ENST00000361654 HELZ2Q9BYK8 2649 aaKnown RBP6.9□□□□□ -1.31
CLIP1-203ENST00000361654 PLAC8Q9NZF1 115 aa6.9□□□□□ -1.31
CLIP1-203ENST00000361654 SPANXA2-OT1Q8N9U9 137 aa6.89□□□□□ -1.31
CLIP1-203ENST00000361654 LCE6AA0A183 80 aa6.89□□□□□ -1.31
CLIP1-203ENST00000361654 LAMA2P24043 3122 aaKnown RBP6.88□□□□□ -1.31
CLIP1-203ENST00000361654 BRCA2P51587 3418 aa6.88□□□□□ -1.31
CLIP1-203ENST00000361654 Q5VSD8 79 aa6.87□□□□□ -1.31
CLIP1-203ENST00000361654 CFAP54Q96N23 3096 aa6.84□□□□□ -1.31
CLIP1-203ENST00000361654 ZCCHC13Q8WW36 166 aaKnown RBP6.83□□□□□ -1.32
CLIP1-203ENST00000361654 S4R3F8 94 aa6.82□□□□□ -1.32
CLIP1-203ENST00000361654 OXTP01178 125 aa6.81□□□□□ -1.32
CLIP1-203ENST00000361654 A0A1B0GU33 70 aa6.8□□□□□ -1.32
CLIP1-203ENST00000361654 CHD9Q3L8U1 2897 aa6.8□□□□□ -1.32
CLIP1-203ENST00000361654 Q1T7F1 81 aa6.79□□□□□ -1.32
CLIP1-203ENST00000361654 FLNAP21333 2647 aaKnown RBP6.79□□□□□ -1.32
CLIP1-203ENST00000361654 LAMA3Q16787 3333 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms