RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 FAM104AQ969W3 186 aa10.97□□□□□ -0.65
SCAF1-201ENST00000360565 STAB1Q9NY15 2570 aa10.97□□□□□ -0.65
SCAF1-201ENST00000360565 LOC110117498A0A087WWA1 95 aa10.97□□□□□ -0.65
SCAF1-201ENST00000360565 SETXQ7Z333 2677 aaKnown RBP10.96□□□□□ -0.66
SCAF1-201ENST00000360565 KRTAP1-1Q07627 177 aa10.95□□□□□ -0.66
SCAF1-201ENST00000360565 NHLRC4P0CG21 123 aaPredicted RBP10.95□□□□□ -0.66
SCAF1-201ENST00000360565 PRR34Q9NV39 138 aa10.95□□□□□ -0.66
SCAF1-201ENST00000360565 LINC00588Q9Y4M8 146 aa10.95□□□□□ -0.66
SCAF1-201ENST00000360565 COL6A5A8TX70 2615 aa10.94□□□□□ -0.66
SCAF1-201ENST00000360565 CASC2Q6XLA1 102 aa10.94□□□□□ -0.66
SCAF1-201ENST00000360565 LOC400499M0QZD8 3231 aa10.94□□□□□ -0.66
SCAF1-201ENST00000360565 SPTSSBQ8NFR3 76 aa10.93□□□□□ -0.66
SCAF1-201ENST00000360565 Q6ZRX8 168 aa10.93□□□□□ -0.66
SCAF1-201ENST00000360565 ST20-AS1Q8NBB2 130 aa10.91□□□□□ -0.66
SCAF1-201ENST00000360565 C9orf129Q5T035 196 aaKnown RBP10.91□□□□□ -0.66
SCAF1-201ENST00000360565 HCG22E2RYF7 251 aa10.9□□□□□ -0.66
SCAF1-201ENST00000360565 SMIM29Q86T20 159 aa10.9□□□□□ -0.66
SCAF1-201ENST00000360565 DMXL1Q9Y485 3027 aa10.89□□□□□ -0.67
SCAF1-201ENST00000360565 Q8NBF4 154 aa10.88□□□□□ -0.67
SCAF1-201ENST00000360565 IGHV6-1A0A0B4J1U7 121 aa10.88□□□□□ -0.67
SCAF1-201ENST00000360565 DNAH10OSP0CZ25 163 aa10.88□□□□□ -0.67
SCAF1-201ENST00000360565 CIRBP-AS1Q8TBR5 109 aa10.88□□□□□ -0.67
SCAF1-201ENST00000360565 V9GYY9 64 aa10.88□□□□□ -0.67
SCAF1-201ENST00000360565 SERTAD4-AS1Q5TG53 156 aa10.87□□□□□ -0.67
SCAF1-201ENST00000360565 IGLV5-52A0A0A0MRZ9 124 aa10.87□□□□□ -0.67
SCAF1-201ENST00000360565 BCE1O60756 84 aa10.87□□□□□ -0.67
SCAF1-201ENST00000360565 FAM168BA1KXE4 195 aa10.86□□□□□ -0.67
SCAF1-201ENST00000360565 TM2D3Q9BRN9 247 aa10.86□□□□□ -0.67
SCAF1-201ENST00000360565 CR1P17927 2039 aa10.86□□□□□ -0.67
SCAF1-201ENST00000360565 KRTAP10-11P60412 298 aa10.86□□□□□ -0.67
SCAF1-201ENST00000360565 LINC00528Q8N1L1 170 aa10.85□□□□□ -0.67
SCAF1-201ENST00000360565 C15orf56Q8N910 161 aa10.85□□□□□ -0.67
SCAF1-201ENST00000360565 LINC00476Q8WZB0 136 aa10.85□□□□□ -0.67
SCAF1-201ENST00000360565 MDFIQ99750 246 aa10.84□□□□□ -0.67
SCAF1-201ENST00000360565 H0Y9P7 68 aa10.84□□□□□ -0.67
SCAF1-201ENST00000360565 PHF5AQ7RTV0 110 aaKnown RBP10.83□□□□□ -0.68
SCAF1-201ENST00000360565 PCOTHQ58A44 107 aa10.83□□□□□ -0.68
SCAF1-201ENST00000360565 CHTF8P0CG12 524 aa10.82□□□□□ -0.68
SCAF1-201ENST00000360565 A0A1B0GW54 56 aa10.8□□□□□ -0.68
SCAF1-201ENST00000360565 KCNQ1DNQ9H478 68 aa10.8□□□□□ -0.68
SCAF1-201ENST00000360565 A6NED7 52 aa10.8□□□□□ -0.68
SCAF1-201ENST00000360565 NBEAL1Q6ZS30 2694 aa10.79□□□□□ -0.68
SCAF1-201ENST00000360565 C1orf134Q5TEV5 83 aa10.79□□□□□ -0.68
SCAF1-201ENST00000360565 C16orf90A8MZG2 172 aa10.79□□□□□ -0.68
SCAF1-201ENST00000360565 RPS28P62857 69 aaKnown RBP10.79□□□□□ -0.68
SCAF1-201ENST00000360565 ASH1LQ9NR48 2969 aaKnown RBP10.78□□□□□ -0.68
SCAF1-201ENST00000360565 ZANQ9Y493 2812 aa10.77□□□□□ -0.69
SCAF1-201ENST00000360565 EPM2AB3EWF7 344 aa10.77□□□□□ -0.69
SCAF1-201ENST00000360565 PSPHP1O15172 72 aa10.76□□□□□ -0.69
SCAF1-201ENST00000360565 LINC01600Q96MT4 127 aa10.76□□□□□ -0.69
SCAF1-201ENST00000360565 IGLV1-50A0A075B6I6 118 aa10.76□□□□□ -0.69
SCAF1-201ENST00000360565 SEC61GP60059 68 aa10.75□□□□□ -0.69
SCAF1-201ENST00000360565 TRBV7-4A0A0J9YYF1 115 aa10.74□□□□□ -0.69
SCAF1-201ENST00000360565 C1orf64Q8NEQ6 169 aa10.74□□□□□ -0.69
SCAF1-201ENST00000360565 NBDYA0A0U1RRE5 68 aa10.73□□□□□ -0.69
SCAF1-201ENST00000360565 K7EIL1 84 aa10.73□□□□□ -0.69
SCAF1-201ENST00000360565 Q8N377 158 aa10.73□□□□□ -0.69
SCAF1-201ENST00000360565 C1orf195Q5TG92 126 aa10.72□□□□□ -0.69
SCAF1-201ENST00000360565 ITPR2Q14571 2701 aa10.72□□□□□ -0.69
SCAF1-201ENST00000360565 DMDP11532 3685 aa10.72□□□□□ -0.69
SCAF1-201ENST00000360565 hDV103S1A0JD37 113 aa10.72□□□□□ -0.69
SCAF1-201ENST00000360565 MOBPQ13875 183 aa10.72□□□□□ -0.69
SCAF1-201ENST00000360565 C4orf26Q17RF5 130 aa10.71□□□□□ -0.69
SCAF1-201ENST00000360565 RPL37AP61513 92 aaKnown RBP10.71□□□□□ -0.7
SCAF1-201ENST00000360565 PRR15LQ9BU68 103 aa10.71□□□□□ -0.7
SCAF1-201ENST00000360565 UTP20O75691 2785 aaKnown RBP10.7□□□□□ -0.7
SCAF1-201ENST00000360565 RETNLBQ9BQ08 111 aa10.68□□□□□ -0.7
SCAF1-201ENST00000360565 K7EQZ3 153 aa10.68□□□□□ -0.7
SCAF1-201ENST00000360565 CASC10Q5T4H9 136 aa10.68□□□□□ -0.7
SCAF1-201ENST00000360565 NSD1Q96L73 2696 aaPredicted RBP10.67□□□□□ -0.7
SCAF1-201ENST00000360565 OBSCN-AS1Q96MR7 158 aa10.67□□□□□ -0.7
SCAF1-201ENST00000360565 A0A0G2JQZ4 141 aa10.66□□□□□ -0.7
SCAF1-201ENST00000360565 A0A1W2PNN7 141 aa10.66□□□□□ -0.7
SCAF1-201ENST00000360565 WDFY3Q8IZQ1 3526 aa10.65□□□□□ -0.7
SCAF1-201ENST00000360565 TLX1NBP0CAT3 122 aa10.62□□□□□ -0.71
SCAF1-201ENST00000360565 ASPMQ8IZT6 3477 aa10.62□□□□□ -0.71
SCAF1-201ENST00000360565 IGFL1Q6UW32 110 aa10.62□□□□□ -0.71
SCAF1-201ENST00000360565 RTL8CO15255 209 aa10.61□□□□□ -0.71
SCAF1-201ENST00000360565 PRO0628Q9UI54 55 aa10.61□□□□□ -0.71
SCAF1-201ENST00000360565 ERC2-IT1O76042 136 aa10.61□□□□□ -0.71
SCAF1-201ENST00000360565 KLKP1Q107X0 134 aa10.61□□□□□ -0.71
SCAF1-201ENST00000360565 Q8NDZ9 215 aa10.59□□□□□ -0.71
SCAF1-201ENST00000360565 PMAIP1Q13794 54 aa10.58□□□□□ -0.72
SCAF1-201ENST00000360565 TRAV22A0A0B4J277 110 aa10.58□□□□□ -0.72
SCAF1-201ENST00000360565 CELSR2Q9HCU4 2923 aa10.58□□□□□ -0.72
SCAF1-201ENST00000360565 PLA2G2DQ9UNK4 145 aa10.58□□□□□ -0.72
SCAF1-201ENST00000360565 A0A1W2PNM2 257 aa10.57□□□□□ -0.72
SCAF1-201ENST00000360565 TP53AIP1Q9HCN2 124 aa10.57□□□□□ -0.72
SCAF1-201ENST00000360565 H7BZZ5 65 aa10.56□□□□□ -0.72
SCAF1-201ENST00000360565 HRNRQ86YZ3 2850 aaPredicted RBP10.56□□□□□ -0.72
SCAF1-201ENST00000360565 LAMA5O15230 3695 aa10.54□□□□□ -0.72
SCAF1-201ENST00000360565 NF1P21359 2839 aa10.54□□□□□ -0.72
SCAF1-201ENST00000360565 A8MWP4 228 aa10.54□□□□□ -0.72
SCAF1-201ENST00000360565 C9orf163Q8N9P6 203 aa10.53□□□□□ -0.72
SCAF1-201ENST00000360565 SPACA4Q8TDM5 124 aa10.52□□□□□ -0.73
SCAF1-201ENST00000360565 DCHS1Q96JQ0 3298 aa10.52□□□□□ -0.73
SCAF1-201ENST00000360565 H3BPC8 53 aa10.52□□□□□ -0.73
SCAF1-201ENST00000360565 APCP25054 2843 aa10.51□□□□□ -0.73
SCAF1-201ENST00000360565 IGKV2D-30A0A075B6S6 120 aa10.5□□□□□ -0.73
SCAF1-201ENST00000360565 IGKV2-30P06310 120 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms