RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 LINC00528Q8N1L1 170 aa11.17□□□□□ -0.62
COL4A2-201ENST00000360467 C8orf17Q9NRJ1 99 aa11.17□□□□□ -0.62
COL4A2-201ENST00000360467 COA5Q86WW8 74 aa11.16□□□□□ -0.62
COL4A2-201ENST00000360467 PSORS1C2Q9UIG4 136 aa11.16□□□□□ -0.62
COL4A2-201ENST00000360467 IGLV7-43P04211 117 aa11.15□□□□□ -0.62
COL4A2-201ENST00000360467 USP9XQ93008 2570 aaPredicted RBP11.15□□□□□ -0.62
COL4A2-201ENST00000360467 Q8N377 158 aa11.13□□□□□ -0.63
COL4A2-201ENST00000360467 SETD2Q9BYW2 2564 aaPredicted RBP11.13□□□□□ -0.63
COL4A2-201ENST00000360467 KRTAP1-3Q8IUG1 177 aa11.12□□□□□ -0.63
COL4A2-201ENST00000360467 PRR34Q9NV39 138 aa11.12□□□□□ -0.63
COL4A2-201ENST00000360467 DNAH12Q6ZR08 3092 aa11.12□□□□□ -0.63
COL4A2-201ENST00000360467 A0A1B0GVX0 72 aa11.11□□□□□ -0.63
COL4A2-201ENST00000360467 CEP295Q9C0D2 2601 aa11.11□□□□□ -0.63
COL4A2-201ENST00000360467 CHD8Q9HCK8 2581 aa11.1□□□□□ -0.63
COL4A2-201ENST00000360467 KLK9Q2XQG4 91 aa11.1□□□□□ -0.63
COL4A2-201ENST00000360467 SPTBN4Q9H254 2564 aa11.09□□□□□ -0.63
COL4A2-201ENST00000360467 C9orf163Q8N9P6 203 aa11.08□□□□□ -0.64
COL4A2-201ENST00000360467 A0A0D9SG42 100 aa11.08□□□□□ -0.64
COL4A2-201ENST00000360467 ERC2-IT1O76042 136 aa11.08□□□□□ -0.64
COL4A2-201ENST00000360467 PRR15Q8IV56 129 aa11.08□□□□□ -0.64
COL4A2-201ENST00000360467 LINC00336Q6ZUF6 198 aa11.07□□□□□ -0.64
COL4A2-201ENST00000360467 RBM12B-AS1Q9P1G2 102 aa11.07□□□□□ -0.64
COL4A2-201ENST00000360467 POLQO75417 2590 aa11.07□□□□□ -0.64
COL4A2-201ENST00000360467 Q8N1X5 172 aa11.07□□□□□ -0.64
COL4A2-201ENST00000360467 TNP2Q05952 138 aa11.05□□□□□ -0.64
COL4A2-201ENST00000360467 A8MUN3 132 aa11.04□□□□□ -0.64
COL4A2-201ENST00000360467 KRTAP1-1Q07627 177 aa11.03□□□□□ -0.64
COL4A2-201ENST00000360467 ZNF575Q86XF7 245 aa11.02□□□□□ -0.64
COL4A2-201ENST00000360467 PRO0628Q9UI54 55 aa11.02□□□□□ -0.65
COL4A2-201ENST00000360467 SPRR4Q96PI1 79 aa11□□□□□ -0.65
COL4A2-201ENST00000360467 ACANP16112 2415 aa10.99□□□□□ -0.65
COL4A2-201ENST00000360467 IGLV5-48A0A075B6I7 105 aa10.99□□□□□ -0.65
COL4A2-201ENST00000360467 TLX1NBP0CAT3 122 aa10.98□□□□□ -0.65
COL4A2-201ENST00000360467 LINC00612Q8N6U2 182 aa10.98□□□□□ -0.65
COL4A2-201ENST00000360467 MIR22HGQ0VDD5 57 aa10.95□□□□□ -0.66
COL4A2-201ENST00000360467 UQCR11O14957 56 aa10.95□□□□□ -0.66
COL4A2-201ENST00000360467 PLA2G2DQ9UNK4 145 aa10.95□□□□□ -0.66
COL4A2-201ENST00000360467 USP9YO00507 2555 aaPredicted RBP10.94□□□□□ -0.66
COL4A2-201ENST00000360467 CRIPTQ9P021 101 aa10.94□□□□□ -0.66
COL4A2-201ENST00000360467 PKD1L2Q7Z442 2459 aa10.94□□□□□ -0.66
COL4A2-201ENST00000360467 MTORP42345 2549 aa10.94□□□□□ -0.66
COL4A2-201ENST00000360467 M0R2T5 61 aa10.94□□□□□ -0.66
COL4A2-201ENST00000360467 PRR26Q8N8Z3 221 aa10.92□□□□□ -0.66
COL4A2-201ENST00000360467 CNBPP62633 177 aaKnown RBP10.91□□□□□ -0.66
COL4A2-201ENST00000360467 Q6ZSA8 131 aa10.9□□□□□ -0.66
COL4A2-201ENST00000360467 FASNP49327 2511 aaKnown RBP10.89□□□□□ -0.67
COL4A2-201ENST00000360467 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.89□□□□□ -0.67
COL4A2-201ENST00000360467 C5orf42Q9H799 3197 aa10.88□□□□□ -0.67
COL4A2-201ENST00000360467 F8P00451 2351 aa10.88□□□□□ -0.67
COL4A2-201ENST00000360467 A0A1W2PNM2 257 aa10.85□□□□□ -0.67
COL4A2-201ENST00000360467 IGLV7-46A0A075B6I9 117 aa10.85□□□□□ -0.67
COL4A2-201ENST00000360467 RPS28P62857 69 aaKnown RBP10.82□□□□□ -0.68
COL4A2-201ENST00000360467 FAM104AQ969W3 186 aa10.8□□□□□ -0.68
COL4A2-201ENST00000360467 CYP4F30PQ9H0H9 118 aa10.74□□□□□ -0.69
COL4A2-201ENST00000360467 CDC42SE1Q9NRR8 79 aa10.7□□□□□ -0.7
COL4A2-201ENST00000360467 CAMK2N1Q7Z7J9 78 aa10.66□□□□□ -0.7
COL4A2-201ENST00000360467 H7BZZ5 65 aa10.66□□□□□ -0.7
COL4A2-201ENST00000360467 KLKP1Q107X0 134 aa10.65□□□□□ -0.7
COL4A2-201ENST00000360467 CEP350Q5VT06 3117 aa10.63□□□□□ -0.71
COL4A2-201ENST00000360467 HECTD1Q9ULT8 2610 aa10.63□□□□□ -0.71
COL4A2-201ENST00000360467 PCNTO95613 3336 aa10.6□□□□□ -0.71
COL4A2-201ENST00000360467 CR1P17927 2039 aa10.59□□□□□ -0.71
COL4A2-201ENST00000360467 BPTFQ12830 3046 aa10.59□□□□□ -0.71
COL4A2-201ENST00000360467 Q5VSD8 79 aa10.59□□□□□ -0.71
COL4A2-201ENST00000360467 CD164Q04900 197 aa10.56□□□□□ -0.72
COL4A2-201ENST00000360467 S4R3F8 94 aa10.55□□□□□ -0.72
COL4A2-201ENST00000360467 HRES1P13985 223 aa10.55□□□□□ -0.72
COL4A2-201ENST00000360467 PLAC8Q9NZF1 115 aa10.53□□□□□ -0.72
COL4A2-201ENST00000360467 SPANXA2-OT1Q8N9U9 137 aa10.5□□□□□ -0.73
COL4A2-201ENST00000360467 EPG5Q9HCE0 2579 aa10.5□□□□□ -0.73
COL4A2-201ENST00000360467 Q8NDZ9 215 aa10.49□□□□□ -0.73
COL4A2-201ENST00000360467 ZCCHC13Q8WW36 166 aaKnown RBP10.48□□□□□ -0.73
COL4A2-201ENST00000360467 PRRC2CQ9Y520 2896 aaKnown RBP10.48□□□□□ -0.73
COL4A2-201ENST00000360467 KRTAP1-5Q9BYS1 174 aa10.47□□□□□ -0.73
COL4A2-201ENST00000360467 Q8N9P0 234 aaPredicted RBP10.47□□□□□ -0.73
COL4A2-201ENST00000360467 A0A1B0GU33 70 aa10.47□□□□□ -0.73
COL4A2-201ENST00000360467 KRTAP10-2P60368 255 aa10.46□□□□□ -0.73
COL4A2-201ENST00000360467 USP24Q9UPU5 2620 aa10.46□□□□□ -0.73
COL4A2-201ENST00000360467 FAM229BQ4G0N7 80 aa10.45□□□□□ -0.74
COL4A2-201ENST00000360467 KRTAP10-1P60331 282 aa10.45□□□□□ -0.74
COL4A2-201ENST00000360467 OCR1Q9BZK8 76 aa10.43□□□□□ -0.74
COL4A2-201ENST00000360467 MGAM2Q2M2H8 2515 aa10.42□□□□□ -0.74
COL4A2-201ENST00000360467 KTN1-AS1Q86SY8 53 aa10.42□□□□□ -0.74
COL4A2-201ENST00000360467 MKI67P46013 3256 aaKnown RBP10.41□□□□□ -0.74
COL4A2-201ENST00000360467 CSAG1Q6PB30 78 aa10.4□□□□□ -0.74
COL4A2-201ENST00000360467 MMP24-AS1A0A0U1RRL7 71 aa10.4□□□□□ -0.75
COL4A2-201ENST00000360467 LINC00483Q53H64 154 aa10.39□□□□□ -0.75
COL4A2-201ENST00000360467 LUZP6Q538Z0 58 aa10.38□□□□□ -0.75
COL4A2-201ENST00000360467 CHD7Q9P2D1 2997 aa10.38□□□□□ -0.75
COL4A2-201ENST00000360467 LCE6AA0A183 80 aa10.37□□□□□ -0.75
COL4A2-201ENST00000360467 WIPF1O43516 503 aa10.36□□□□□ -0.75
COL4A2-201ENST00000360467 Q1T7F1 81 aa10.36□□□□□ -0.75
COL4A2-201ENST00000360467 FLNBO75369 2602 aaKnown RBP10.36□□□□□ -0.75
COL4A2-201ENST00000360467 SPINK7P58062 85 aa10.35□□□□□ -0.75
COL4A2-201ENST00000360467 LCA10Q71F78 164 aa10.35□□□□□ -0.75
COL4A2-201ENST00000360467 Q5W150 140 aa10.34□□□□□ -0.75
COL4A2-201ENST00000360467 FLNAP21333 2647 aaKnown RBP10.33□□□□□ -0.76
COL4A2-201ENST00000360467 SEC61BP60468 96 aaKnown RBP10.31□□□□□ -0.76
COL4A2-201ENST00000360467 R4GN34 69 aa10.31□□□□□ -0.76
COL4A2-201ENST00000360467 ITPR3Q14573 2671 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms