RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 FAM168BA1KXE4 195 aa10.36□□□□□ -0.75
TRAPPC11-202ENST00000357207 A8MUN3 132 aa10.36□□□□□ -0.75
TRAPPC11-202ENST00000357207 LINC00612Q8N6U2 182 aa10.36□□□□□ -0.75
TRAPPC11-202ENST00000357207 C1orf134Q5TEV5 83 aa10.35□□□□□ -0.75
TRAPPC11-202ENST00000357207 IGLV1-50A0A075B6I6 118 aa10.35□□□□□ -0.75
TRAPPC11-202ENST00000357207 Q8N377 158 aa10.35□□□□□ -0.75
TRAPPC11-202ENST00000357207 TRANK1O15050 2925 aa10.34□□□□□ -0.75
TRAPPC11-202ENST00000357207 ITPR3Q14573 2671 aa10.34□□□□□ -0.75
TRAPPC11-202ENST00000357207 A8MWP4 228 aa10.32□□□□□ -0.76
TRAPPC11-202ENST00000357207 OBSCN-AS1Q96MR7 158 aa10.32□□□□□ -0.76
TRAPPC11-202ENST00000357207 CHTF8P0CG12 524 aa10.3□□□□□ -0.76
TRAPPC11-202ENST00000357207 C15orf56Q8N910 161 aa10.3□□□□□ -0.76
TRAPPC11-202ENST00000357207 MDFIQ99750 246 aa10.3□□□□□ -0.76
TRAPPC11-202ENST00000357207 MGAQ8IWI9 3026 aa10.3□□□□□ -0.76
TRAPPC11-202ENST00000357207 FAM104AQ969W3 186 aa10.29□□□□□ -0.76
TRAPPC11-202ENST00000357207 CHD6Q8TD26 2715 aa10.29□□□□□ -0.76
TRAPPC11-202ENST00000357207 IGFL1Q6UW32 110 aa10.28□□□□□ -0.76
TRAPPC11-202ENST00000357207 LAMA3Q16787 3333 aa10.28□□□□□ -0.76
TRAPPC11-202ENST00000357207 MKI67P46013 3256 aaKnown RBP10.28□□□□□ -0.76
TRAPPC11-202ENST00000357207 CYP4F30PQ9H0H9 118 aa10.26□□□□□ -0.77
TRAPPC11-202ENST00000357207 COA5Q86WW8 74 aa10.25□□□□□ -0.77
TRAPPC11-202ENST00000357207 C7orf65Q6ZTY9 151 aa10.25□□□□□ -0.77
TRAPPC11-202ENST00000357207 PRR15Q8IV56 129 aa10.25□□□□□ -0.77
TRAPPC11-202ENST00000357207 SPACA4Q8TDM5 124 aa10.24□□□□□ -0.77
TRAPPC11-202ENST00000357207 LOC101927531A0A1B0GV80 90 aa10.23□□□□□ -0.77
TRAPPC11-202ENST00000357207 KRTAP24-1Q3LI83 254 aa10.23□□□□□ -0.77
TRAPPC11-202ENST00000357207 ATP11AUNQ6ZP68 121 aa10.22□□□□□ -0.77
TRAPPC11-202ENST00000357207 MAP1AP78559 2803 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC11-202ENST00000357207 NBDYA0A0U1RRE5 68 aa10.22□□□□□ -0.77
TRAPPC11-202ENST00000357207 CFAP46Q8IYW2 2715 aa10.22□□□□□ -0.77
TRAPPC11-202ENST00000357207 A0A1W2PNM2 257 aa10.21□□□□□ -0.77
TRAPPC11-202ENST00000357207 MRPL34Q9BQ48 92 aaKnown RBP10.21□□□□□ -0.77
TRAPPC11-202ENST00000357207 WDFY4Q6ZS81 3184 aa10.21□□□□□ -0.78
TRAPPC11-202ENST00000357207 A0A0G2JQZ4 141 aa10.2□□□□□ -0.78
TRAPPC11-202ENST00000357207 A0A1W2PNN7 141 aa10.2□□□□□ -0.78
TRAPPC11-202ENST00000357207 LINC00313P59037 77 aa10.2□□□□□ -0.78
TRAPPC11-202ENST00000357207 TLX1NBP0CAT3 122 aa10.19□□□□□ -0.78
TRAPPC11-202ENST00000357207 PLA2G2DQ9UNK4 145 aa10.18□□□□□ -0.78
TRAPPC11-202ENST00000357207 BRCA2P51587 3418 aa10.18□□□□□ -0.78
TRAPPC11-202ENST00000357207 CR1P17927 2039 aa10.17□□□□□ -0.78
TRAPPC11-202ENST00000357207 IGLV5-48A0A075B6I7 105 aa10.15□□□□□ -0.78
TRAPPC11-202ENST00000357207 RTL8CO15255 209 aa10.15□□□□□ -0.78
TRAPPC11-202ENST00000357207 FAM229AH3BQW9 127 aa10.15□□□□□ -0.78
TRAPPC11-202ENST00000357207 C8orf17Q9NRJ1 99 aa10.15□□□□□ -0.79
TRAPPC11-202ENST00000357207 C8orf87E5RJ46 101 aa10.14□□□□□ -0.79
TRAPPC11-202ENST00000357207 ZNF292O60281 2723 aa10.14□□□□□ -0.79
TRAPPC11-202ENST00000357207 KRTAP10-3P60369 221 aa10.13□□□□□ -0.79
TRAPPC11-202ENST00000357207 HELZ2Q9BYK8 2649 aaKnown RBP10.13□□□□□ -0.79
TRAPPC11-202ENST00000357207 OCR1Q9BZK8 76 aa10.13□□□□□ -0.79
TRAPPC11-202ENST00000357207 VPS13AQ96RL7 3174 aa10.12□□□□□ -0.79
TRAPPC11-202ENST00000357207 PRUNE2Q8WUY3 3088 aa10.11□□□□□ -0.79
TRAPPC11-202ENST00000357207 IGLV8-61A0A075B6I0 122 aa10.11□□□□□ -0.79
TRAPPC11-202ENST00000357207 UNC80Q8N2C7 3258 aa10.11□□□□□ -0.79
TRAPPC11-202ENST00000357207 TRIOO75962 3097 aa10.1□□□□□ -0.79
TRAPPC11-202ENST00000357207 GCN1Q92616 2671 aaKnown RBP10.08□□□□□ -0.8
TRAPPC11-202ENST00000357207 A0A1B0GVX0 72 aa10.08□□□□□ -0.8
TRAPPC11-202ENST00000357207 KRTAP10-11P60412 298 aa10.08□□□□□ -0.8
TRAPPC11-202ENST00000357207 UQCR11O14957 56 aa10.06□□□□□ -0.8
TRAPPC11-202ENST00000357207 WIPF1O43516 503 aa10.06□□□□□ -0.8
TRAPPC11-202ENST00000357207 SPANXA2-OT1Q8N9U9 137 aa10.06□□□□□ -0.8
TRAPPC11-202ENST00000357207 UNC79Q9P2D8 2635 aa10.06□□□□□ -0.8
TRAPPC11-202ENST00000357207 C9orf163Q8N9P6 203 aa10.06□□□□□ -0.8
TRAPPC11-202ENST00000357207 FRYQ5TBA9 3013 aa10.05□□□□□ -0.8
TRAPPC11-202ENST00000357207 CASC10Q5T4H9 136 aa10.05□□□□□ -0.8
TRAPPC11-202ENST00000357207 DSPP15924 2871 aaKnown RBP10.04□□□□□ -0.8
TRAPPC11-202ENST00000357207 CYSTM1Q9H1C7 97 aa10.04□□□□□ -0.8
TRAPPC11-202ENST00000357207 TYMSOSQ8TAI1 123 aa10.03□□□□□ -0.8
TRAPPC11-202ENST00000357207 KRTAP1-3Q8IUG1 177 aa10.03□□□□□ -0.8
TRAPPC11-202ENST00000357207 CD164Q04900 197 aa10.02□□□□□ -0.8
TRAPPC11-202ENST00000357207 XIRP2A4UGR9 3374 aa10.01□□□□□ -0.81
TRAPPC11-202ENST00000357207 Q96NJ1 140 aa10.01□□□□□ -0.81
TRAPPC11-202ENST00000357207 IGLV5-37A0A075B6J1 123 aa10□□□□□ -0.81
TRAPPC11-202ENST00000357207 ZNF861PO60384 105 aa10□□□□□ -0.81
TRAPPC11-202ENST00000357207 NOTCH1P46531 2555 aa10□□□□□ -0.81
TRAPPC11-202ENST00000357207 DSCR10P59022 87 aa10□□□□□ -0.81
TRAPPC11-202ENST00000357207 K7EIL1 84 aa10□□□□□ -0.81
TRAPPC11-202ENST00000357207 SSBP3-AS1Q7Z2R9 100 aa10□□□□□ -0.81
TRAPPC11-202ENST00000357207 SPRR4Q96PI1 79 aa9.99□□□□□ -0.81
TRAPPC11-202ENST00000357207 NBEAQ8NFP9 2946 aa9.98□□□□□ -0.81
TRAPPC11-202ENST00000357207 TEX15Q9BXT5 2789 aa9.98□□□□□ -0.81
TRAPPC11-202ENST00000357207 KTN1-AS1Q86SY8 53 aa9.98□□□□□ -0.81
TRAPPC11-202ENST00000357207 Q8NDZ9 215 aa9.98□□□□□ -0.81
TRAPPC11-202ENST00000357207 FREM2Q5SZK8 3169 aa9.98□□□□□ -0.81
TRAPPC11-202ENST00000357207 KRTAP1-1Q07627 177 aa9.97□□□□□ -0.81
TRAPPC11-202ENST00000357207 Q1T7F1 81 aa9.96□□□□□ -0.81
TRAPPC11-202ENST00000357207 Q5XG85 94 aa9.96□□□□□ -0.81
TRAPPC11-202ENST00000357207 CNBPP62633 177 aaKnown RBP9.96□□□□□ -0.82
TRAPPC11-202ENST00000357207 MIR22HGQ0VDD5 57 aa9.95□□□□□ -0.82
TRAPPC11-202ENST00000357207 ANAPC11Q9NYG5 84 aa9.94□□□□□ -0.82
TRAPPC11-202ENST00000357207 NBEAL2Q6ZNJ1 2754 aa9.94□□□□□ -0.82
TRAPPC11-202ENST00000357207 STAB1Q9NY15 2570 aa9.93□□□□□ -0.82
TRAPPC11-202ENST00000357207 PLA2G1BP04054 148 aaKnown RBP9.92□□□□□ -0.82
TRAPPC11-202ENST00000357207 FP248Q71RG6 208 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC11-202ENST00000357207 NBEAL1Q6ZS30 2694 aa9.91□□□□□ -0.82
TRAPPC11-202ENST00000357207 CDC42SE1Q9NRR8 79 aa9.9□□□□□ -0.83
TRAPPC11-202ENST00000357207 A0A087WTM6 91 aa9.89□□□□□ -0.83
TRAPPC11-202ENST00000357207 TEP1Q99973 2627 aaKnown RBP9.89□□□□□ -0.83
TRAPPC11-202ENST00000357207 PSORS1C2Q9UIG4 136 aa9.89□□□□□ -0.83
TRAPPC11-202ENST00000357207 LCA10Q71F78 164 aa9.87□□□□□ -0.83
TRAPPC11-202ENST00000357207 PRR26Q8N8Z3 221 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms