RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 DIRC1Q969H9 104 aa9.79□□□□□ -0.84
FDPS-201ENST00000356657 TMEM238LA0A1B0GVL6 79 aa9.78□□□□□ -0.84
FDPS-201ENST00000356657 A6NJY4 79 aa9.78□□□□□ -0.84
FDPS-201ENST00000356657 UBE2AP49459 152 aa9.78□□□□□ -0.84
FDPS-201ENST00000356657 A4D1N5 150 aa9.77□□□□□ -0.85
FDPS-201ENST00000356657 HNRNPA3P51991 378 aaKnown RBP9.77□□□□□ -0.85
FDPS-201ENST00000356657 FLG2Q5D862 2391 aaPredicted RBP9.76□□□□□ -0.85
FDPS-201ENST00000356657 ETDCA0A1B0GVM5 59 aa9.76□□□□□ -0.85
FDPS-201ENST00000356657 HINT1P49773 126 aaPredicted RBP9.76□□□□□ -0.85
FDPS-201ENST00000356657 HSD52Q0P140 79 aa9.76□□□□□ -0.85
FDPS-201ENST00000356657 FAM19A1Q7Z5A9 133 aa9.76□□□□□ -0.85
FDPS-201ENST00000356657 KRTAP13-1Q8IUC0 172 aa9.76□□□□□ -0.85
FDPS-201ENST00000356657 ZNF73O43830 326 aaPredicted RBP9.75□□□□□ -0.85
FDPS-201ENST00000356657 A6NDN8 102 aa9.74□□□□□ -0.85
FDPS-201ENST00000356657 KRTAP4-16G5E9R7 235 aaPredicted RBP9.74□□□□□ -0.85
FDPS-201ENST00000356657 CEND1Q8N111 149 aa9.74□□□□□ -0.85
FDPS-201ENST00000356657 PKHD1L1Q86WI1 4243 aa9.73□□□□□ -0.85
FDPS-201ENST00000356657 CTAG1AP78358 180 aa9.72□□□□□ -0.85
FDPS-201ENST00000356657 TRBV7-6A0A0J9YX20 115 aa9.72□□□□□ -0.85
FDPS-201ENST00000356657 A0A0B4J2C4 111 aa9.71□□□□□ -0.86
FDPS-201ENST00000356657 PRLHP81277 87 aa9.71□□□□□ -0.86
FDPS-201ENST00000356657 Q6ZRX8 168 aa9.71□□□□□ -0.86
FDPS-201ENST00000356657 MYCBP2O75592 4640 aa9.7□□□□□ -0.86
FDPS-201ENST00000356657 OXTP01178 125 aa9.7□□□□□ -0.86
FDPS-201ENST00000356657 B5MCH6 92 aa9.69□□□□□ -0.86
FDPS-201ENST00000356657 J3QL48 77 aa9.69□□□□□ -0.86
FDPS-201ENST00000356657 RAB37Q96AX2 223 aa9.68□□□□□ -0.86
FDPS-201ENST00000356657 CFC1BP0CG36 223 aa9.67□□□□□ -0.86
FDPS-201ENST00000356657 CFC1P0CG37 223 aa9.67□□□□□ -0.86
FDPS-201ENST00000356657 A0A1B0GWB2 263 aa9.66□□□□□ -0.86
FDPS-201ENST00000356657 M0R143 59 aa9.66□□□□□ -0.86
FDPS-201ENST00000356657 RPL13AP40429 203 aaKnown RBP9.66□□□□□ -0.86
FDPS-201ENST00000356657 C6orf99Q4VX62 202 aa9.66□□□□□ -0.86
FDPS-201ENST00000356657 HIGD2AQ9BW72 106 aa9.66□□□□□ -0.86
FDPS-201ENST00000356657 SNHG12Q9BXW3 62 aa9.66□□□□□ -0.86
FDPS-201ENST00000356657 ZNF706Q9Y5V0 76 aaPredicted RBP9.66□□□□□ -0.86
FDPS-201ENST00000356657 KRTAP29-1A8MX34 341 aaPredicted RBP9.66□□□□□ -0.86
FDPS-201ENST00000356657 FXYD2P54710 66 aa9.66□□□□□ -0.86
FDPS-201ENST00000356657 ELOF1P60002 83 aaKnown RBP9.66□□□□□ -0.86
FDPS-201ENST00000356657 DHRS4-AS1Q9P1J3 65 aa9.66□□□□□ -0.86
FDPS-201ENST00000356657 VAMP3Q15836 100 aa9.65□□□□□ -0.87
FDPS-201ENST00000356657 SMIM11BQ8TCY0 68 aa9.65□□□□□ -0.87
FDPS-201ENST00000356657 COX7BP24311 80 aa9.64□□□□□ -0.87
FDPS-201ENST00000356657 PRO1854Q9UHT4 67 aa9.64□□□□□ -0.87
FDPS-201ENST00000356657 BVES-AS1Q5T3Y7 98 aa9.63□□□□□ -0.87
FDPS-201ENST00000356657 LINC01600Q96MT4 127 aa9.63□□□□□ -0.87
FDPS-201ENST00000356657 DMBT1Q9UGM3 2413 aaPredicted RBP9.62□□□□□ -0.87
FDPS-201ENST00000356657 SMCR5Q8TEV8 140 aa9.62□□□□□ -0.87
FDPS-201ENST00000356657 NHP2Q9NX24 153 aaKnown RBP9.62□□□□□ -0.87
FDPS-201ENST00000356657 Q9BRP9 147 aa9.61□□□□□ -0.87
FDPS-201ENST00000356657 KRTAP1-4P0C5Y4 121 aa9.6□□□□□ -0.87
FDPS-201ENST00000356657 BATFQ16520 125 aa9.6□□□□□ -0.87
FDPS-201ENST00000356657 FAM229BQ4G0N7 80 aa9.6□□□□□ -0.87
FDPS-201ENST00000356657 SLC25A20O43772 301 aa9.58□□□□□ -0.88
FDPS-201ENST00000356657 SPRR4Q96PI1 79 aa9.58□□□□□ -0.88
FDPS-201ENST00000356657 LRP1Q07954 4544 aaKnown RBP9.57□□□□□ -0.88
FDPS-201ENST00000356657 Q1RN00 199 aa9.57□□□□□ -0.88
FDPS-201ENST00000356657 FAT3Q8TDW7 4589 aa9.57□□□□□ -0.88
FDPS-201ENST00000356657 HERC1Q15751 4861 aa9.56□□□□□ -0.88
FDPS-201ENST00000356657 H0YGX0 51 aa9.55□□□□□ -0.88
FDPS-201ENST00000356657 H7C2G1 150 aa9.55□□□□□ -0.88
FDPS-201ENST00000356657 SNCGO76070 127 aa9.55□□□□□ -0.88
FDPS-201ENST00000356657 CRYGAP11844 174 aa9.55□□□□□ -0.88
FDPS-201ENST00000356657 LINC00483Q53H64 154 aa9.54□□□□□ -0.88
FDPS-201ENST00000356657 COL5A1-AS1Q5SY13 56 aa9.54□□□□□ -0.88
FDPS-201ENST00000356657 ERC2-IT1O76042 136 aa9.53□□□□□ -0.88
FDPS-201ENST00000356657 LINC00575Q6W349 94 aa9.53□□□□□ -0.88
FDPS-201ENST00000356657 K7ERJ3 54 aa9.52□□□□□ -0.89
FDPS-201ENST00000356657 COX6CP09669 75 aa9.52□□□□□ -0.89
FDPS-201ENST00000356657 KRTAP10-8P60410 259 aa9.52□□□□□ -0.89
FDPS-201ENST00000356657 A0A1B0GX51 115 aa9.5□□□□□ -0.89
FDPS-201ENST00000356657 hADV29S1A0JD25 119 aa9.5□□□□□ -0.89
FDPS-201ENST00000356657 MT1HL1P0DM35 61 aa9.5□□□□□ -0.89
FDPS-201ENST00000356657 SPRR1BP22528 89 aa9.5□□□□□ -0.89
FDPS-201ENST00000356657 PRR26Q8N8Z3 221 aa9.5□□□□□ -0.89
FDPS-201ENST00000356657 GAGE2AQ6NT46 116 aa9.49□□□□□ -0.89
FDPS-201ENST00000356657 A0A087X002 238 aa9.48□□□□□ -0.89
FDPS-201ENST00000356657 TSPAN13O95857 204 aa9.48□□□□□ -0.89
FDPS-201ENST00000356657 IGLV5-48A0A075B6I7 105 aa9.47□□□□□ -0.89
FDPS-201ENST00000356657 TRIAP1O43715 76 aa9.47□□□□□ -0.89
FDPS-201ENST00000356657 PSMB2P49721 201 aa9.47□□□□□ -0.89
FDPS-201ENST00000356657 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.47□□□□□ -0.89
FDPS-201ENST00000356657 TEX49A0A1B0GTD5 131 aa9.47□□□□□ -0.89
FDPS-201ENST00000356657 GHRHP01286 108 aa9.47□□□□□ -0.89
FDPS-201ENST00000356657 TNXBP22105 4242 aa9.46□□□□□ -0.9
FDPS-201ENST00000356657 TAX1BP3O14907 124 aa9.46□□□□□ -0.9
FDPS-201ENST00000356657 OCIAD2Q56VL3 154 aa9.46□□□□□ -0.9
FDPS-201ENST00000356657 ST20-AS1Q8NBB2 130 aa9.46□□□□□ -0.9
FDPS-201ENST00000356657 TYMSOSQ8TAI1 123 aa9.46□□□□□ -0.9
FDPS-201ENST00000356657 PPDPFLQ8WWR9 84 aa9.46□□□□□ -0.9
FDPS-201ENST00000356657 ANAPC11Q9NYG5 84 aa9.46□□□□□ -0.9
FDPS-201ENST00000356657 A0A1B0GV90 55 aa9.43□□□□□ -0.9
FDPS-201ENST00000356657 KRTAP13-2Q52LG2 175 aa9.43□□□□□ -0.9
FDPS-201ENST00000356657 Q6ZQY7 126 aa9.43□□□□□ -0.9
FDPS-201ENST00000356657 LAMTOR3Q9UHA4 124 aa9.43□□□□□ -0.9
FDPS-201ENST00000356657 LYRM7Q5U5X0 104 aa9.41□□□□□ -0.9
FDPS-201ENST00000356657 H3BQ85 93 aa9.4□□□□□ -0.9
FDPS-201ENST00000356657 LINC01547P58512 204 aaPredicted RBP9.4□□□□□ -0.9
FDPS-201ENST00000356657 SSBP3-AS1Q7Z2R9 100 aa9.4□□□□□ -0.9
FDPS-201ENST00000356657 DNAL4O96015 105 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms