RNA–Protein interactions for RNA: ENST00000350199.8

RNF38-202, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-202ENST00000350199 DEFB116Q30KQ4 102 aa12.84□□□□□ -0.35
RNF38-202ENST00000350199 SETXQ7Z333 2677 aaKnown RBP12.83□□□□□ -0.35
RNF38-202ENST00000350199 NDUFC1O43677 76 aa12.82□□□□□ -0.36
RNF38-202ENST00000350199 Q6ZQT0 140 aa12.82□□□□□ -0.36
RNF38-202ENST00000350199 RTL8CO15255 209 aa12.81□□□□□ -0.36
RNF38-202ENST00000350199 ST20-AS1Q8NBB2 130 aa12.8□□□□□ -0.36
RNF38-202ENST00000350199 CXCL6P80162 114 aa12.8□□□□□ -0.36
RNF38-202ENST00000350199 ITPR1Q14643 2758 aa12.79□□□□□ -0.36
RNF38-202ENST00000350199 LOC110117498A0A087WWA1 95 aa12.78□□□□□ -0.36
RNF38-202ENST00000350199 Q8N9L7 120 aa12.78□□□□□ -0.36
RNF38-202ENST00000350199 GCN1Q92616 2671 aaKnown RBP12.78□□□□□ -0.36
RNF38-202ENST00000350199 COL6A5A8TX70 2615 aa12.78□□□□□ -0.36
RNF38-202ENST00000350199 EPM2AB3EWF7 344 aa12.76□□□□□ -0.37
RNF38-202ENST00000350199 KCNQ1DNQ9H478 68 aa12.76□□□□□ -0.37
RNF38-202ENST00000350199 C9orf129Q5T035 196 aaKnown RBP12.76□□□□□ -0.37
RNF38-202ENST00000350199 IGLV1-50A0A075B6I6 118 aa12.75□□□□□ -0.37
RNF38-202ENST00000350199 TACC2O95359 2948 aa12.75□□□□□ -0.37
RNF38-202ENST00000350199 UTP20O75691 2785 aaKnown RBP12.74□□□□□ -0.37
RNF38-202ENST00000350199 WWC2-AS2Q96NR7 200 aa12.74□□□□□ -0.37
RNF38-202ENST00000350199 IGHV6-1A0A0B4J1U7 121 aa12.74□□□□□ -0.37
RNF38-202ENST00000350199 LINC00528Q8N1L1 170 aa12.74□□□□□ -0.37
RNF38-202ENST00000350199 C5orf47Q569G3 176 aa12.73□□□□□ -0.37
RNF38-202ENST00000350199 STAB1Q9NY15 2570 aa12.73□□□□□ -0.37
RNF38-202ENST00000350199 CASC2Q6XLA1 102 aa12.73□□□□□ -0.37
RNF38-202ENST00000350199 CASC10Q5T4H9 136 aa12.73□□□□□ -0.37
RNF38-202ENST00000350199 UBR5O95071 2799 aaPredicted RBP12.72□□□□□ -0.37
RNF38-202ENST00000350199 LINC00476Q8WZB0 136 aa12.72□□□□□ -0.37
RNF38-202ENST00000350199 PRR4Q16378 134 aa12.71□□□□□ -0.37
RNF38-202ENST00000350199 Q8NBF4 154 aa12.71□□□□□ -0.38
RNF38-202ENST00000350199 ATP5EP56381 51 aaPredicted RBP12.7□□□□□ -0.38
RNF38-202ENST00000350199 APLNQ9ULZ1 77 aa12.69□□□□□ -0.38
RNF38-202ENST00000350199 TLX1NBP0CAT3 122 aa12.69□□□□□ -0.38
RNF38-202ENST00000350199 CFAP47Q6ZTR5 3102 aa12.68□□□□□ -0.38
RNF38-202ENST00000350199 A0A1B0GW54 56 aa12.68□□□□□ -0.38
RNF38-202ENST00000350199 HCG22E2RYF7 251 aa12.68□□□□□ -0.38
RNF38-202ENST00000350199 LINC00208Q96KT6 92 aa12.68□□□□□ -0.38
RNF38-202ENST00000350199 NOTCH1P46531 2555 aa12.67□□□□□ -0.38
RNF38-202ENST00000350199 MOBPQ13875 183 aa12.67□□□□□ -0.38
RNF38-202ENST00000350199 BCE1O60756 84 aa12.67□□□□□ -0.38
RNF38-202ENST00000350199 MPLKIPQ8TAP9 179 aa12.65□□□□□ -0.38
RNF38-202ENST00000350199 ITPR2Q14571 2701 aa12.64□□□□□ -0.39
RNF38-202ENST00000350199 NBEAL2Q6ZNJ1 2754 aa12.64□□□□□ -0.39
RNF38-202ENST00000350199 PLA2G2DQ9UNK4 145 aa12.62□□□□□ -0.39
RNF38-202ENST00000350199 TMEM254Q8TBM7 123 aa12.62□□□□□ -0.39
RNF38-202ENST00000350199 BAHCC1Q9P281 2608 aa12.61□□□□□ -0.39
RNF38-202ENST00000350199 C9orf163Q8N9P6 203 aa12.61□□□□□ -0.39
RNF38-202ENST00000350199 SMIM29Q86T20 159 aa12.6□□□□□ -0.39
RNF38-202ENST00000350199 HRNRQ86YZ3 2850 aaPredicted RBP12.59□□□□□ -0.39
RNF38-202ENST00000350199 A0A087WTM6 91 aa12.58□□□□□ -0.4
RNF38-202ENST00000350199 MUC3AQ02505 3323 aa12.58□□□□□ -0.4
RNF38-202ENST00000350199 APCP25054 2843 aa12.58□□□□□ -0.4
RNF38-202ENST00000350199 CNBPP62633 177 aaKnown RBP12.55□□□□□ -0.4
RNF38-202ENST00000350199 Q8N377 158 aa12.55□□□□□ -0.4
RNF38-202ENST00000350199 TRBV7-4A0A0J9YYF1 115 aa12.55□□□□□ -0.4
RNF38-202ENST00000350199 H0Y9P7 68 aa12.54□□□□□ -0.4
RNF38-202ENST00000350199 ZANQ9Y493 2812 aa12.54□□□□□ -0.4
RNF38-202ENST00000350199 A0A1W2PNN7 141 aa12.54□□□□□ -0.4
RNF38-202ENST00000350199 LIMD2Q9BT23 127 aa12.52□□□□□ -0.4
RNF38-202ENST00000350199 DMDP11532 3685 aa12.5□□□□□ -0.41
RNF38-202ENST00000350199 CRYGAP11844 174 aa12.48□□□□□ -0.41
RNF38-202ENST00000350199 SERP1Q9Y6X1 66 aa12.48□□□□□ -0.41
RNF38-202ENST00000350199 PCOTHQ58A44 107 aa12.47□□□□□ -0.41
RNF38-202ENST00000350199 BRK1Q8WUW1 75 aa12.47□□□□□ -0.41
RNF38-202ENST00000350199 RETNLBQ9BQ08 111 aa12.47□□□□□ -0.41
RNF38-202ENST00000350199 IGFL1Q6UW32 110 aa12.46□□□□□ -0.41
RNF38-202ENST00000350199 RPL37AP61513 92 aaKnown RBP12.45□□□□□ -0.42
RNF38-202ENST00000350199 ERC2-IT1O76042 136 aa12.45□□□□□ -0.42
RNF38-202ENST00000350199 SEC61GP60059 68 aa12.45□□□□□ -0.42
RNF38-202ENST00000350199 SPACA4Q8TDM5 124 aa12.45□□□□□ -0.42
RNF38-202ENST00000350199 hDV103S1A0JD37 113 aa12.45□□□□□ -0.42
RNF38-202ENST00000350199 WDFY3Q8IZQ1 3526 aa12.44□□□□□ -0.42
RNF38-202ENST00000350199 IGLV5-37A0A075B6J1 123 aa12.44□□□□□ -0.42
RNF38-202ENST00000350199 HIVEP1P15822 2718 aa12.43□□□□□ -0.42
RNF38-202ENST00000350199 SMIM26A0A096LP01 95 aa12.43□□□□□ -0.42
RNF38-202ENST00000350199 LINC01600Q96MT4 127 aa12.42□□□□□ -0.42
RNF38-202ENST00000350199 V9GYY9 64 aa12.41□□□□□ -0.42
RNF38-202ENST00000350199 C1orf64Q8NEQ6 169 aa12.41□□□□□ -0.42
RNF38-202ENST00000350199 A0A0G2JQZ4 141 aa12.41□□□□□ -0.42
RNF38-202ENST00000350199 Q8NDZ9 215 aa12.4□□□□□ -0.42
RNF38-202ENST00000350199 K7EQZ3 153 aa12.39□□□□□ -0.43
RNF38-202ENST00000350199 ZNF861PO60384 105 aa12.39□□□□□ -0.43
RNF38-202ENST00000350199 LAMA5O15230 3695 aa12.38□□□□□ -0.43
RNF38-202ENST00000350199 OBSCN-AS1Q96MR7 158 aa12.38□□□□□ -0.43
RNF38-202ENST00000350199 RELNP78509 3460 aa12.36□□□□□ -0.43
RNF38-202ENST00000350199 TYMSOSQ8TAI1 123 aa12.36□□□□□ -0.43
RNF38-202ENST00000350199 TP53AIP1Q9HCN2 124 aa12.35□□□□□ -0.43
RNF38-202ENST00000350199 NSD1Q96L73 2696 aaPredicted RBP12.35□□□□□ -0.43
RNF38-202ENST00000350199 CRYBG3Q68DQ2 2970 aa12.34□□□□□ -0.43
RNF38-202ENST00000350199 PSORS1C2Q9UIG4 136 aa12.34□□□□□ -0.43
RNF38-202ENST00000350199 A8MWP4 228 aa12.34□□□□□ -0.43
RNF38-202ENST00000350199 A0A1W2PNM2 257 aa12.31□□□□□ -0.44
RNF38-202ENST00000350199 KRTAP26-1Q6PEX3 210 aa12.3□□□□□ -0.44
RNF38-202ENST00000350199 CELSR2Q9HCU4 2923 aa12.3□□□□□ -0.44
RNF38-202ENST00000350199 PLA2G1BP04054 148 aaKnown RBP12.29□□□□□ -0.44
RNF38-202ENST00000350199 ANAPC11Q9NYG5 84 aa12.29□□□□□ -0.44
RNF38-202ENST00000350199 IGLV5-48A0A075B6I7 105 aa12.29□□□□□ -0.44
RNF38-202ENST00000350199 FAM229AH3BQW9 127 aa12.28□□□□□ -0.44
RNF38-202ENST00000350199 ASPMQ8IZT6 3477 aa12.28□□□□□ -0.44
RNF38-202ENST00000350199 SPTSSBQ8NFR3 76 aa12.27□□□□□ -0.44
RNF38-202ENST00000350199 IGLV7-43P04211 117 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms