RNA–Protein interactions for RNA: ENST00000349460.8

EPB41-203, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-203ENST00000349460 XGP55808 180 aa6.92□□□□□ -1.3
EPB41-203ENST00000349460 LINC00643Q86TS7 51 aa6.92□□□□□ -1.3
EPB41-203ENST00000349460 LINC00474Q9P2X8 69 aa6.92□□□□□ -1.3
EPB41-203ENST00000349460 SERTAD4-AS1Q5TG53 156 aa6.91□□□□□ -1.3
EPB41-203ENST00000349460 COL7A1Q02388 2944 aa6.91□□□□□ -1.3
EPB41-203ENST00000349460 PLECQ15149 4684 aaKnown RBP6.9□□□□□ -1.31
EPB41-203ENST00000349460 A0A1B0GW54 56 aa6.9□□□□□ -1.31
EPB41-203ENST00000349460 PSCAO43653 123 aa6.9□□□□□ -1.31
EPB41-203ENST00000349460 C9orf163Q8N9P6 203 aa6.9□□□□□ -1.31
EPB41-203ENST00000349460 Q6ZR54 194 aa6.89□□□□□ -1.31
EPB41-203ENST00000349460 MRPL55Q7Z7F7 128 aaKnown RBP6.89□□□□□ -1.31
EPB41-203ENST00000349460 KRTAP7-1Q8IUC3 87 aa6.89□□□□□ -1.31
EPB41-203ENST00000349460 B5MCH6 92 aa6.88□□□□□ -1.31
EPB41-203ENST00000349460 Q6ZRX8 168 aa6.88□□□□□ -1.31
EPB41-203ENST00000349460 H0Y9J4 135 aa6.88□□□□□ -1.31
EPB41-203ENST00000349460 MT-ATP8P03928 68 aa6.87□□□□□ -1.31
EPB41-203ENST00000349460 ATP5EP2Q5VTU8 51 aa6.87□□□□□ -1.31
EPB41-203ENST00000349460 IGLV5-48A0A075B6I7 105 aa6.87□□□□□ -1.31
EPB41-203ENST00000349460 RBM3P98179 157 aaKnown RBP6.87□□□□□ -1.31
EPB41-203ENST00000349460 Q6ZQY7 126 aa6.87□□□□□ -1.31
EPB41-203ENST00000349460 TRBV7-4A0A0J9YYF1 115 aa6.86□□□□□ -1.31
EPB41-203ENST00000349460 Q6ZQT0 140 aa6.86□□□□□ -1.31
EPB41-203ENST00000349460 CSMD3Q7Z407 3707 aa6.86□□□□□ -1.31
EPB41-203ENST00000349460 STAB2Q8WWQ8 2551 aa6.85□□□□□ -1.31
EPB41-203ENST00000349460 GAGE2BQ13066 116 aa6.85□□□□□ -1.31
EPB41-203ENST00000349460 Q6JHZ5 121 aa6.85□□□□□ -1.31
EPB41-203ENST00000349460 C14orf132Q9NPU4 83 aa6.85□□□□□ -1.31
EPB41-203ENST00000349460 ALMS1Q8TCU4 4167 aa6.84□□□□□ -1.31
EPB41-203ENST00000349460 A0A096LNI7 61 aa6.83□□□□□ -1.32
EPB41-203ENST00000349460 GAGE2AQ6NT46 116 aa6.83□□□□□ -1.32
EPB41-203ENST00000349460 REG3GQ6UW15 175 aa6.83□□□□□ -1.32
EPB41-203ENST00000349460 ETDCA0A1B0GVM5 59 aa6.82□□□□□ -1.32
EPB41-203ENST00000349460 RPL37AP8A6NKH3 93 aa6.82□□□□□ -1.32
EPB41-203ENST00000349460 NDUFV3P56181 108 aaKnown RBP6.82□□□□□ -1.32
EPB41-203ENST00000349460 DSCR8Q96T75 97 aa6.82□□□□□ -1.32
EPB41-203ENST00000349460 STARD9Q9P2P6 4700 aa6.82□□□□□ -1.32
EPB41-203ENST00000349460 LINC01547P58512 204 aaPredicted RBP6.82□□□□□ -1.32
EPB41-203ENST00000349460 SMCR5Q8TEV8 140 aa6.82□□□□□ -1.32
EPB41-203ENST00000349460 FAM168BA1KXE4 195 aa6.81□□□□□ -1.32
EPB41-203ENST00000349460 A0A087WTM6 91 aa6.8□□□□□ -1.32
EPB41-203ENST00000349460 LAMTOR3Q9UHA4 124 aa6.8□□□□□ -1.32
EPB41-203ENST00000349460 Q9BRP9 147 aa6.8□□□□□ -1.32
EPB41-203ENST00000349460 TNP2Q05952 138 aa6.79□□□□□ -1.32
EPB41-203ENST00000349460 WWC2-AS2Q96NR7 200 aa6.79□□□□□ -1.32
EPB41-203ENST00000349460 LINC00846Q9NV44 126 aa6.79□□□□□ -1.32
EPB41-203ENST00000349460 C3orf84H3BNL1 204 aa6.79□□□□□ -1.32
EPB41-203ENST00000349460 FAM19A5Q7Z5A7 132 aaPredicted RBP6.79□□□□□ -1.32
EPB41-203ENST00000349460 DNAH10Q8IVF4 4471 aa6.78□□□□□ -1.32
EPB41-203ENST00000349460 A0A1W2PNN7 141 aa6.78□□□□□ -1.32
EPB41-203ENST00000349460 SPRR1BP22528 89 aa6.78□□□□□ -1.32
EPB41-203ENST00000349460 Q8N377 158 aa6.78□□□□□ -1.32
EPB41-203ENST00000349460 SPACA4Q8TDM5 124 aa6.78□□□□□ -1.32
EPB41-203ENST00000349460 DNAH2Q9P225 4427 aa6.78□□□□□ -1.32
EPB41-203ENST00000349460 IGLV8-61A0A075B6I0 122 aa6.78□□□□□ -1.32
EPB41-203ENST00000349460 SVIPQ8NHG7 77 aa6.78□□□□□ -1.32
EPB41-203ENST00000349460 DNAH17Q9UFH2 4485 aa6.78□□□□□ -1.32
EPB41-203ENST00000349460 MEGF8Q7Z7M0 2845 aa6.77□□□□□ -1.33
EPB41-203ENST00000349460 LYSTQ99698 3801 aa6.77□□□□□ -1.33
EPB41-203ENST00000349460 UBL5Q9BZL1 73 aa6.76□□□□□ -1.33
EPB41-203ENST00000349460 HIST1H4AP62805 103 aaKnown RBP6.76□□□□□ -1.33
EPB41-203ENST00000349460 A0A1B0GV72 72 aa6.75□□□□□ -1.33
EPB41-203ENST00000349460 BCE1O60756 84 aa6.75□□□□□ -1.33
EPB41-203ENST00000349460 CXCL6P80162 114 aa6.75□□□□□ -1.33
EPB41-203ENST00000349460 C1orf134Q5TEV5 83 aa6.75□□□□□ -1.33
EPB41-203ENST00000349460 LINC00476Q8WZB0 136 aa6.74□□□□□ -1.33
EPB41-203ENST00000349460 KRTAP13-1Q8IUC0 172 aa6.74□□□□□ -1.33
EPB41-203ENST00000349460 PLAC8Q9NZF1 115 aa6.74□□□□□ -1.33
EPB41-203ENST00000349460 HECTD4Q9Y4D8 3996 aa6.73□□□□□ -1.33
EPB41-203ENST00000349460 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.72□□□□□ -1.33
EPB41-203ENST00000349460 SPRR4Q96PI1 79 aa6.72□□□□□ -1.33
EPB41-203ENST00000349460 IGKV2-24A0A0C4DH68 120 aa6.71□□□□□ -1.34
EPB41-203ENST00000349460 RTL8CO15255 209 aa6.71□□□□□ -1.34
EPB41-203ENST00000349460 SMIM29Q86T20 159 aa6.71□□□□□ -1.34
EPB41-203ENST00000349460 RPL37AP61513 92 aaKnown RBP6.7□□□□□ -1.34
EPB41-203ENST00000349460 UBE2BP63146 152 aa6.7□□□□□ -1.34
EPB41-203ENST00000349460 DNAH8Q96JB1 4490 aa6.69□□□□□ -1.34
EPB41-203ENST00000349460 Q6ZVQ6 151 aa6.69□□□□□ -1.34
EPB41-203ENST00000349460 FAM19A1Q7Z5A9 133 aa6.69□□□□□ -1.34
EPB41-203ENST00000349460 ERC2-IT1O76042 136 aa6.68□□□□□ -1.34
EPB41-203ENST00000349460 PHF5AQ7RTV0 110 aaKnown RBP6.68□□□□□ -1.34
EPB41-203ENST00000349460 Q8NBF4 154 aa6.68□□□□□ -1.34
EPB41-203ENST00000349460 FUSP35637 526 aaKnown RBP eCLIP6.68□□□□□ -1.34
EPB41-203ENST00000349460 ANAPC13Q9BS18 74 aa6.68□□□□□ -1.34
EPB41-203ENST00000349460 ATOX1O00244 68 aa6.67□□□□□ -1.34
EPB41-203ENST00000349460 FRAS1Q86XX4 4008 aa6.67□□□□□ -1.34
EPB41-203ENST00000349460 CHTF8P0CG12 524 aa6.67□□□□□ -1.34
EPB41-203ENST00000349460 LINC00483Q53H64 154 aa6.66□□□□□ -1.34
EPB41-203ENST00000349460 CRYGAP11844 174 aa6.66□□□□□ -1.34
EPB41-203ENST00000349460 C1orf137Q5JT78 98 aa6.66□□□□□ -1.34
EPB41-203ENST00000349460 F8WEM9 126 aa6.66□□□□□ -1.34
EPB41-203ENST00000349460 M0R2N4 97 aa6.66□□□□□ -1.34
EPB41-203ENST00000349460 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.66□□□□□ -1.34
EPB41-203ENST00000349460 IGLV5-52A0A0A0MRZ9 124 aa6.65□□□□□ -1.34
EPB41-203ENST00000349460 ST20-AS1Q8NBB2 130 aa6.65□□□□□ -1.34
EPB41-203ENST00000349460 ZNF706Q9Y5V0 76 aaPredicted RBP6.65□□□□□ -1.34
EPB41-203ENST00000349460 KRTAP11-1Q8IUC1 163 aa6.64□□□□□ -1.35
EPB41-203ENST00000349460 FAM236AA0A1B0GUQ0 79 aa6.64□□□□□ -1.35
EPB41-203ENST00000349460 FAM236BA0A1B0GV22 79 aa6.64□□□□□ -1.35
EPB41-203ENST00000349460 PANO1I0J062 215 aa6.64□□□□□ -1.35
EPB41-203ENST00000349460 SMIM20Q8N5G0 67 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms