RNA–Protein interactions for RNA: ENST00000349460.8

EPB41-203, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-203ENST00000349460 NISCHQ9Y2I1 1504 aa24.18■■□□□ 1.46
EPB41-203ENST00000349460 CCDC180Q9P1Z9 1646 aa21.2■□□□□ 0.98
EPB41-203ENST00000349460 ZCCHC6Q5VYS8 1495 aaKnown RBP20.41■□□□□ 0.86
EPB41-203ENST00000349460 DCAF1Q9Y4B6 1507 aa20.26■□□□□ 0.83
EPB41-203ENST00000349460 MYO15BQ96JP2 1530 aa19.99■□□□□ 0.79
EPB41-203ENST00000349460 NACADO15069 1562 aa19.6■□□□□ 0.73
EPB41-203ENST00000349460 SHROOM4Q9ULL8 1493 aa19.32■□□□□ 0.68
EPB41-203ENST00000349460 RB1CC1Q8TDY2 1594 aa19.3■□□□□ 0.68
EPB41-203ENST00000349460 ABCC9O60706 1549 aa19.3■□□□□ 0.68
EPB41-203ENST00000349460 DCAF8L2P0C7V8 631 aa19.24■□□□□ 0.67
EPB41-203ENST00000349460 SCRIBQ14160 1630 aa19.12■□□□□ 0.65
EPB41-203ENST00000349460 UNC13AQ9UPW8 1703 aa18.89■□□□□ 0.61
EPB41-203ENST00000349460 RSF1Q96T23 1441 aaPredicted RBP18.75■□□□□ 0.59
EPB41-203ENST00000349460 SUPT5HO00267 1087 aaKnown RBP18.72■□□□□ 0.59
EPB41-203ENST00000349460 BAZ1AQ9NRL2 1556 aaPredicted RBP18.69■□□□□ 0.58
EPB41-203ENST00000349460 BICRAQ9NZM4 1560 aa18.67■□□□□ 0.58
EPB41-203ENST00000349460 MROH2BQ7Z745 1585 aa18.56■□□□□ 0.56
EPB41-203ENST00000349460 CECR2Q9BXF3 1484 aa18.56■□□□□ 0.56
EPB41-203ENST00000349460 SMARCA4P51532 1647 aa18.54■□□□□ 0.56
EPB41-203ENST00000349460 PEG3Q9GZU2 1588 aa18.5■□□□□ 0.55
EPB41-203ENST00000349460 WIZO95785 1651 aa18.41■□□□□ 0.54
EPB41-203ENST00000349460 TOP2AP11388 1531 aaKnown RBP18.4■□□□□ 0.54
EPB41-203ENST00000349460 CHIC1Q5VXU3 224 aa18.3■□□□□ 0.52
EPB41-203ENST00000349460 EIF4G1Q04637 1599 aaKnown RBP18.24■□□□□ 0.51
EPB41-203ENST00000349460 SMARCA2P51531 1590 aa18.23■□□□□ 0.51
EPB41-203ENST00000349460 ATAD2BQ9ULI0 1458 aa18.12■□□□□ 0.49
EPB41-203ENST00000349460 HMGXB3Q12766 1538 aa18.1■□□□□ 0.49
EPB41-203ENST00000349460 PABPN1Q86U42 306 aaKnown RBP eCLIP18.09■□□□□ 0.49
EPB41-203ENST00000349460 CCDC88BA6NC98 1476 aa18.07■□□□□ 0.48
EPB41-203ENST00000349460 NCAPD3P42695 1498 aa18.03■□□□□ 0.48
EPB41-203ENST00000349460 BAZ1BQ9UIG0 1483 aaKnown RBP17.99■□□□□ 0.47
EPB41-203ENST00000349460 TRIM41Q8WV44 630 aa17.77■□□□□ 0.44
EPB41-203ENST00000349460 PRDM2Q13029 1718 aa17.76■□□□□ 0.43
EPB41-203ENST00000349460 EEA1Q15075 1411 aa17.71■□□□□ 0.43
EPB41-203ENST00000349460 CC2D2AQ9P2K1 1620 aa17.67■□□□□ 0.42
EPB41-203ENST00000349460 CFTRP13569 1480 aa17.66■□□□□ 0.42
EPB41-203ENST00000349460 BIVM-ERCC5R4GMW8 1640 aa17.64■□□□□ 0.41
EPB41-203ENST00000349460 ABCC8Q09428 1581 aa17.63■□□□□ 0.41
EPB41-203ENST00000349460 WRNQ14191 1432 aaPredicted RBP eCLIP17.62■□□□□ 0.416e-6■■□□□ 13.8
EPB41-203ENST00000349460 TOP2BQ02880 1626 aa17.6■□□□□ 0.41
EPB41-203ENST00000349460 SYNJ1O43426 1573 aa17.55■□□□□ 0.4
EPB41-203ENST00000349460 CADPSQ9ULU8 1353 aa17.47■□□□□ 0.39
EPB41-203ENST00000349460 KIF21BO75037 1637 aa17.44■□□□□ 0.38
EPB41-203ENST00000349460 LAMC3Q9Y6N6 1575 aa17.4■□□□□ 0.38
EPB41-203ENST00000349460 CUX1P39880 1505 aa17.38■□□□□ 0.37
EPB41-203ENST00000349460 LOC105371045A0A1W2PR82 267 aa17.37■□□□□ 0.37
EPB41-203ENST00000349460 SOGA1O94964 1423 aa17.35■□□□□ 0.37
EPB41-203ENST00000349460 TNIKQ9UKE5 1360 aa17.33■□□□□ 0.36
EPB41-203ENST00000349460 CEP164Q9UPV0 1460 aa17.32■□□□□ 0.36
EPB41-203ENST00000349460 GOLGA3Q08378 1498 aa17.32■□□□□ 0.36
EPB41-203ENST00000349460 ERICH3Q5RHP9 1530 aa17.3■□□□□ 0.36
EPB41-203ENST00000349460 CSRNP3Q8WYN3 585 aa17.3■□□□□ 0.36
EPB41-203ENST00000349460 DNMBPQ6XZF7 1577 aa17.26■□□□□ 0.35
EPB41-203ENST00000349460 FANCD2Q9BXW9 1451 aa17.24■□□□□ 0.35
EPB41-203ENST00000349460 RUSC2Q8N2Y8 1516 aa17.23■□□□□ 0.35
EPB41-203ENST00000349460 PRXQ9BXM0 1461 aa17.21■□□□□ 0.35
EPB41-203ENST00000349460 KIF27Q86VH2 1401 aa17.19■□□□□ 0.34
EPB41-203ENST00000349460 FAM9AQ8IZU1 332 aaPredicted RBP17.17■□□□□ 0.34
EPB41-203ENST00000349460 PDS5BQ9NTI5 1447 aa17.15■□□□□ 0.34
EPB41-203ENST00000349460 CEP162Q5TB80 1403 aa17.13■□□□□ 0.33
EPB41-203ENST00000349460 TOPBP1Q92547 1522 aa17.12■□□□□ 0.33
EPB41-203ENST00000349460 ABCA10Q8WWZ4 1543 aa17.11■□□□□ 0.33
EPB41-203ENST00000349460 WDR97A6NE52 1622 aa17.11■□□□□ 0.33
EPB41-203ENST00000349460 FGD5Q6ZNL6 1462 aa17.11■□□□□ 0.33
EPB41-203ENST00000349460 TRIM26Q12899 539 aaPredicted RBP17.04■□□□□ 0.32
EPB41-203ENST00000349460 RAPGEF2Q9Y4G8 1499 aa17.04■□□□□ 0.32
EPB41-203ENST00000349460 NESP48681 1621 aa17.04■□□□□ 0.32
EPB41-203ENST00000349460 CUL7Q14999 1698 aa17.03■□□□□ 0.32
EPB41-203ENST00000349460 POLA1P09884 1462 aaPredicted RBP17.02■□□□□ 0.32
EPB41-203ENST00000349460 KIF21AQ7Z4S6 1674 aa17.02■□□□□ 0.31
EPB41-203ENST00000349460 URB2Q14146 1524 aaKnown RBP17.01■□□□□ 0.31
EPB41-203ENST00000349460 CUX2O14529 1486 aa16.99■□□□□ 0.31
EPB41-203ENST00000349460 ABCA5Q8WWZ7 1642 aa16.98■□□□□ 0.31
EPB41-203ENST00000349460 IGF1RP08069 1367 aa16.97■□□□□ 0.31
EPB41-203ENST00000349460 CLIP1P30622 1438 aa16.95■□□□□ 0.3
EPB41-203ENST00000349460 MRC2Q9UBG0 1479 aa16.93■□□□□ 0.3
EPB41-203ENST00000349460 TARBP1Q13395 1621 aaKnown RBP16.93■□□□□ 0.3
EPB41-203ENST00000349460 VPS8Q8N3P4 1428 aa16.92■□□□□ 0.3
EPB41-203ENST00000349460 WDR62O43379 1518 aa16.91■□□□□ 0.3
EPB41-203ENST00000349460 UBTFP17480 764 aaKnown RBP16.91■□□□□ 0.3
EPB41-203ENST00000349460 CARMIL1Q5VZK9 1371 aa16.86■□□□□ 0.29
EPB41-203ENST00000349460 RAD54L2Q9Y4B4 1467 aa16.83■□□□□ 0.28
EPB41-203ENST00000349460 CTTNBP2Q8WZ74 1663 aa16.82■□□□□ 0.28
EPB41-203ENST00000349460 PCGF6Q9BYE7 350 aa16.82■□□□□ 0.28
EPB41-203ENST00000349460 MAP3K1Q13233 1512 aa16.82■□□□□ 0.28
EPB41-203ENST00000349460 DNAJC5BQ9UF47 199 aa16.82■□□□□ 0.28
EPB41-203ENST00000349460 EFCAB5A4FU69 1503 aa16.81■□□□□ 0.28
EPB41-203ENST00000349460 ARAP1Q96P48 1450 aa16.81■□□□□ 0.28
EPB41-203ENST00000349460 IFT140Q96RY7 1462 aa16.79■□□□□ 0.28
EPB41-203ENST00000349460 GAPVD1Q14C86 1478 aa16.78■□□□□ 0.28
EPB41-203ENST00000349460 PBRM1Q86U86 1689 aa16.78■□□□□ 0.28
EPB41-203ENST00000349460 THOC2Q8NI27 1593 aaKnown RBP16.77■□□□□ 0.28
EPB41-203ENST00000349460 HRCP23327 699 aa16.76■□□□□ 0.27
EPB41-203ENST00000349460 ARHGAP35Q9NRY4 1499 aa16.76■□□□□ 0.27
EPB41-203ENST00000349460 AQRO60306 1485 aaKnown RBP eCLIP16.71■□□□□ 0.272e-7■■■■■ 38.9
EPB41-203ENST00000349460 ADAMTS12P58397 1594 aa16.7■□□□□ 0.26
EPB41-203ENST00000349460 SAMD9Q5K651 1589 aa16.68■□□□□ 0.26
EPB41-203ENST00000349460 FHAD1B1AJZ9 1412 aa16.68■□□□□ 0.26
EPB41-203ENST00000349460 GRIN2BQ13224 1484 aa16.68■□□□□ 0.26
EPB41-203ENST00000349460 EHMT2Q96KQ7 1210 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms