RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 RPL37AP8A6NKH3 93 aa13.64□□□□□ -0.23
TSPAN3-202ENST00000346495 ELOF1P60002 83 aaKnown RBP13.64□□□□□ -0.23
TSPAN3-202ENST00000346495 TNP2Q05952 138 aa13.64□□□□□ -0.23
TSPAN3-202ENST00000346495 BAALC-AS2P0C853 105 aa13.63□□□□□ -0.23
TSPAN3-202ENST00000346495 OCIAD2Q56VL3 154 aa13.62□□□□□ -0.23
TSPAN3-202ENST00000346495 hADV29S1A0JD25 119 aa13.61□□□□□ -0.23
TSPAN3-202ENST00000346495 IGLV5-52A0A0A0MRZ9 124 aa13.61□□□□□ -0.23
TSPAN3-202ENST00000346495 DNAH2Q9P225 4427 aa13.6□□□□□ -0.23
TSPAN3-202ENST00000346495 ORMDL1Q9P0S3 153 aa13.59□□□□□ -0.23
TSPAN3-202ENST00000346495 K7ERU9 68 aa13.57□□□□□ -0.24
TSPAN3-202ENST00000346495 SPRR1AP35321 89 aa13.57□□□□□ -0.24
TSPAN3-202ENST00000346495 FUSP35637 526 aaKnown RBP eCLIP13.57□□□□□ -0.243e-6■□□□□ 10.8
TSPAN3-202ENST00000346495 LINC00528Q8N1L1 170 aa13.57□□□□□ -0.24
TSPAN3-202ENST00000346495 SPACA4Q8TDM5 124 aa13.57□□□□□ -0.24
TSPAN3-202ENST00000346495 PPDPFLQ8WWR9 84 aa13.57□□□□□ -0.24
TSPAN3-202ENST00000346495 LCE6AA0A183 80 aa13.56□□□□□ -0.24
TSPAN3-202ENST00000346495 PANO1I0J062 215 aa13.55□□□□□ -0.24
TSPAN3-202ENST00000346495 DPH3Q96FX2 82 aa13.55□□□□□ -0.24
TSPAN3-202ENST00000346495 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.54□□□□□ -0.24
TSPAN3-202ENST00000346495 DNAH17Q9UFH2 4485 aa13.54□□□□□ -0.24
TSPAN3-202ENST00000346495 ETDCA0A1B0GVM5 59 aa13.53□□□□□ -0.24
TSPAN3-202ENST00000346495 KRTAP4-16G5E9R7 235 aaPredicted RBP13.53□□□□□ -0.24
TSPAN3-202ENST00000346495 REG3GQ6UW15 175 aa13.53□□□□□ -0.24
TSPAN3-202ENST00000346495 J3QR89 54 aa13.53□□□□□ -0.24
TSPAN3-202ENST00000346495 PHF5AQ7RTV0 110 aaKnown RBP13.53□□□□□ -0.24
TSPAN3-202ENST00000346495 INAFM2P0DMQ5 153 aa13.52□□□□□ -0.25
TSPAN3-202ENST00000346495 EPM2AB3EWF7 344 aa13.51□□□□□ -0.25
TSPAN3-202ENST00000346495 B5MCH6 92 aa13.51□□□□□ -0.25
TSPAN3-202ENST00000346495 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.51□□□□□ -0.25
TSPAN3-202ENST00000346495 TEX49A0A1B0GTD5 131 aa13.5□□□□□ -0.25
TSPAN3-202ENST00000346495 TMEM256-PLSCR3K7ERE1 68 aa13.5□□□□□ -0.25
TSPAN3-202ENST00000346495 Q6ZRX8 168 aa13.5□□□□□ -0.25
TSPAN3-202ENST00000346495 H3BQ85 93 aa13.5□□□□□ -0.25
TSPAN3-202ENST00000346495 UBE2BP63146 152 aa13.5□□□□□ -0.25
TSPAN3-202ENST00000346495 Q6ZQY7 126 aa13.5□□□□□ -0.25
TSPAN3-202ENST00000346495 DHRS4-AS1Q9P1J3 65 aa13.48□□□□□ -0.25
TSPAN3-202ENST00000346495 GHRHP01286 108 aa13.47□□□□□ -0.25
TSPAN3-202ENST00000346495 KRTAP10-2P60368 255 aa13.46□□□□□ -0.25
TSPAN3-202ENST00000346495 FRAS1Q86XX4 4008 aa13.46□□□□□ -0.26
TSPAN3-202ENST00000346495 HYDINQ4G0P3 5121 aa13.45□□□□□ -0.26
TSPAN3-202ENST00000346495 PLAC8Q9NZF1 115 aa13.43□□□□□ -0.26
TSPAN3-202ENST00000346495 HECTD4Q9Y4D8 3996 aa13.43□□□□□ -0.26
TSPAN3-202ENST00000346495 Q9BRP9 147 aa13.42□□□□□ -0.26
TSPAN3-202ENST00000346495 KRTAP11-1Q8IUC1 163 aa13.42□□□□□ -0.26
TSPAN3-202ENST00000346495 FAM19A1Q7Z5A9 133 aa13.41□□□□□ -0.26
TSPAN3-202ENST00000346495 OBSCN-AS1Q96MR7 158 aa13.41□□□□□ -0.26
TSPAN3-202ENST00000346495 JMJD7-PLA2G4BH0Y9G9 81 aa13.39□□□□□ -0.27
TSPAN3-202ENST00000346495 LINC00336Q6ZUF6 198 aa13.39□□□□□ -0.27
TSPAN3-202ENST00000346495 SACSQ9NZJ4 4579 aa13.36□□□□□ -0.27
TSPAN3-202ENST00000346495 H0Y9J4 135 aa13.35□□□□□ -0.27
TSPAN3-202ENST00000346495 PRLHP81277 87 aa13.35□□□□□ -0.27
TSPAN3-202ENST00000346495 SMCR5Q8TEV8 140 aa13.35□□□□□ -0.27
TSPAN3-202ENST00000346495 LAMTOR3Q9UHA4 124 aa13.35□□□□□ -0.27
TSPAN3-202ENST00000346495 BCE1O60756 84 aa13.34□□□□□ -0.27
TSPAN3-202ENST00000346495 DNAH11Q96DT5 4516 aa13.32□□□□□ -0.28
TSPAN3-202ENST00000346495 ERC2-IT1O76042 136 aa13.32□□□□□ -0.28
TSPAN3-202ENST00000346495 C14orf132Q9NPU4 83 aa13.32□□□□□ -0.28
TSPAN3-202ENST00000346495 UBE2AP49459 152 aa13.31□□□□□ -0.28
TSPAN3-202ENST00000346495 DEFB105AQ8NG35 78 aa13.31□□□□□ -0.28
TSPAN3-202ENST00000346495 A0A1B0GV72 72 aa13.3□□□□□ -0.28
TSPAN3-202ENST00000346495 KRTAP10-1P60331 282 aa13.3□□□□□ -0.28
TSPAN3-202ENST00000346495 VPS25Q9BRG1 176 aa13.3□□□□□ -0.28
TSPAN3-202ENST00000346495 IGLV5-48A0A075B6I7 105 aa13.29□□□□□ -0.28
TSPAN3-202ENST00000346495 NDUFV3P56181 108 aaKnown RBP13.29□□□□□ -0.28
TSPAN3-202ENST00000346495 LINC01547P58512 204 aaPredicted RBP13.29□□□□□ -0.28
TSPAN3-202ENST00000346495 Q6ZSA8 131 aa13.29□□□□□ -0.28
TSPAN3-202ENST00000346495 Q8N377 158 aa13.29□□□□□ -0.28
TSPAN3-202ENST00000346495 HIGD2AQ9BW72 106 aa13.29□□□□□ -0.28
TSPAN3-202ENST00000346495 FAM30AQ9NZY2 134 aa13.29□□□□□ -0.28
TSPAN3-202ENST00000346495 FAT2Q9NYQ8 4349 aa13.29□□□□□ -0.28
TSPAN3-202ENST00000346495 RBM3P98179 157 aaKnown RBP13.28□□□□□ -0.28
TSPAN3-202ENST00000346495 ST20-AS1Q8NBB2 130 aa13.28□□□□□ -0.28
TSPAN3-202ENST00000346495 FAM240AA0A1B0GVK7 77 aa13.27□□□□□ -0.29
TSPAN3-202ENST00000346495 KRTAP13-1Q8IUC0 172 aa13.25□□□□□ -0.29
TSPAN3-202ENST00000346495 CIRBP-AS1Q8TBR5 109 aa13.25□□□□□ -0.29
TSPAN3-202ENST00000346495 ACYP1P07311 99 aa13.24□□□□□ -0.29
TSPAN3-202ENST00000346495 PSORS1C2Q9UIG4 136 aa13.24□□□□□ -0.29
TSPAN3-202ENST00000346495 PKD1P98161 4303 aa13.24□□□□□ -0.29
TSPAN3-202ENST00000346495 DNAH5Q8TE73 4624 aa13.24□□□□□ -0.29
TSPAN3-202ENST00000346495 GAGE2AQ6NT46 116 aa13.24□□□□□ -0.29
TSPAN3-202ENST00000346495 DSCR8Q96T75 97 aa13.23□□□□□ -0.29
TSPAN3-202ENST00000346495 LOC110117498A0A087WWA1 95 aa13.22□□□□□ -0.29
TSPAN3-202ENST00000346495 SCXQ7RTU7 201 aa13.22□□□□□ -0.29
TSPAN3-202ENST00000346495 CCKP06307 115 aa13.21□□□□□ -0.29
TSPAN3-202ENST00000346495 CDIP1Q9H305 208 aa13.21□□□□□ -0.3
TSPAN3-202ENST00000346495 PDE6GP18545 87 aa13.2□□□□□ -0.3
TSPAN3-202ENST00000346495 C1orf137Q5JT78 98 aa13.2□□□□□ -0.3
TSPAN3-202ENST00000346495 A0A1B0GVY2 172 aa13.18□□□□□ -0.3
TSPAN3-202ENST00000346495 Q6ZQT0 140 aa13.18□□□□□ -0.3
TSPAN3-202ENST00000346495 DNAH8Q96JB1 4490 aa13.18□□□□□ -0.3
TSPAN3-202ENST00000346495 TRBV7-4A0A0J9YYF1 115 aa13.17□□□□□ -0.3
TSPAN3-202ENST00000346495 C3orf22Q8N5N4 141 aa13.16□□□□□ -0.3
TSPAN3-202ENST00000346495 C21orf62-AS1Q17RA5 79 aa13.15□□□□□ -0.3
TSPAN3-202ENST00000346495 RYR2Q92736 4967 aa13.14□□□□□ -0.31
TSPAN3-202ENST00000346495 SPRR1BP22528 89 aa13.13□□□□□ -0.31
TSPAN3-202ENST00000346495 SMIM29Q86T20 159 aa13.13□□□□□ -0.31
TSPAN3-202ENST00000346495 ZNF861PO60384 105 aa13.13□□□□□ -0.31
TSPAN3-202ENST00000346495 F8WEM9 126 aa13.1□□□□□ -0.31
TSPAN3-202ENST00000346495 IGLV7-43P04211 117 aa13.1□□□□□ -0.31
TSPAN3-202ENST00000346495 HAMPP81172 84 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms