RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 LGALS3P17931 250 aaKnown RBP9.63□□□□□ -0.87
ATG4B-201ENST00000344376 NDUFA12Q9UI09 145 aa9.63□□□□□ -0.87
ATG4B-201ENST00000344376 A0A1W2PPM0 123 aa9.62□□□□□ -0.87
ATG4B-201ENST00000344376 SMIM13P0DJ93 91 aa9.62□□□□□ -0.87
ATG4B-201ENST00000344376 SCGB1D4Q6XE38 83 aa9.62□□□□□ -0.87
ATG4B-201ENST00000344376 SPANXB1Q9NS25 103 aaPredicted RBP9.62□□□□□ -0.87
ATG4B-201ENST00000344376 H3BUT2 72 aa9.61□□□□□ -0.87
ATG4B-201ENST00000344376 HIST1H4GQ99525 98 aa9.61□□□□□ -0.87
ATG4B-201ENST00000344376 TSPEAR-AS2P59090 65 aa9.6□□□□□ -0.87
ATG4B-201ENST00000344376 TMEM126AQ9H061 195 aa9.59□□□□□ -0.87
ATG4B-201ENST00000344376 UBR4Q5T4S7 5183 aa9.59□□□□□ -0.87
ATG4B-201ENST00000344376 TMEM238LA0A1B0GVL6 79 aa9.58□□□□□ -0.88
ATG4B-201ENST00000344376 A6NJY4 79 aa9.58□□□□□ -0.88
ATG4B-201ENST00000344376 FXYD2P54710 66 aa9.58□□□□□ -0.88
ATG4B-201ENST00000344376 FAM19A1Q7Z5A9 133 aa9.58□□□□□ -0.88
ATG4B-201ENST00000344376 KRTAP13-1Q8IUC0 172 aa9.58□□□□□ -0.88
ATG4B-201ENST00000344376 MIR7-3HGQ8N6C7 128 aa9.58□□□□□ -0.88
ATG4B-201ENST00000344376 Q8NDZ9 215 aa9.58□□□□□ -0.88
ATG4B-201ENST00000344376 A0A1B0GWB2 263 aa9.58□□□□□ -0.88
ATG4B-201ENST00000344376 TMEM238C9JI98 176 aa9.58□□□□□ -0.88
ATG4B-201ENST00000344376 M0R378 163 aa9.58□□□□□ -0.88
ATG4B-201ENST00000344376 FABP2P12104 132 aa9.58□□□□□ -0.88
ATG4B-201ENST00000344376 SPCS1Q9Y6A9 102 aa9.58□□□□□ -0.88
ATG4B-201ENST00000344376 CRYGAP11844 174 aa9.57□□□□□ -0.88
ATG4B-201ENST00000344376 PRLHP81277 87 aa9.56□□□□□ -0.88
ATG4B-201ENST00000344376 C21orf62-AS1Q17RA5 79 aa9.56□□□□□ -0.88
ATG4B-201ENST00000344376 VPS25Q9BRG1 176 aa9.55□□□□□ -0.88
ATG4B-201ENST00000344376 RAB37Q96AX2 223 aa9.54□□□□□ -0.88
ATG4B-201ENST00000344376 NHP2Q9NX24 153 aaKnown RBP9.54□□□□□ -0.88
ATG4B-201ENST00000344376 NCR3O14931 201 aa9.53□□□□□ -0.88
ATG4B-201ENST00000344376 TYMSOSQ8TAI1 123 aa9.53□□□□□ -0.88
ATG4B-201ENST00000344376 A0A087X002 238 aa9.52□□□□□ -0.89
ATG4B-201ENST00000344376 TIMM17BO60830 172 aa9.52□□□□□ -0.89
ATG4B-201ENST00000344376 NAA38Q9BRA0 125 aaKnown RBP9.52□□□□□ -0.89
ATG4B-201ENST00000344376 A0A0J9YXY3 114 aa9.51□□□□□ -0.89
ATG4B-201ENST00000344376 PRYO14603 147 aa9.51□□□□□ -0.89
ATG4B-201ENST00000344376 FAM229BQ4G0N7 80 aa9.51□□□□□ -0.89
ATG4B-201ENST00000344376 LRP2P98164 4655 aa9.5□□□□□ -0.89
ATG4B-201ENST00000344376 DAND5Q8N907 189 aa9.5□□□□□ -0.89
ATG4B-201ENST00000344376 HIGD2AQ9BW72 106 aa9.5□□□□□ -0.89
ATG4B-201ENST00000344376 SPANXDQ9BXN6 97 aa9.5□□□□□ -0.89
ATG4B-201ENST00000344376 SPANXCQ9NY87 97 aa9.5□□□□□ -0.89
ATG4B-201ENST00000344376 ANAPC11Q9NYG5 84 aa9.5□□□□□ -0.89
ATG4B-201ENST00000344376 K7ERJ3 54 aa9.49□□□□□ -0.89
ATG4B-201ENST00000344376 LOC107984156A0A0G2JMH3 177 aa9.48□□□□□ -0.89
ATG4B-201ENST00000344376 ARL17AQ8IVW1 177 aa9.48□□□□□ -0.89
ATG4B-201ENST00000344376 F8W1H4 67 aa9.47□□□□□ -0.89
ATG4B-201ENST00000344376 LITAFQ99732 161 aa9.47□□□□□ -0.89
ATG4B-201ENST00000344376 KCNQ1DNQ9H478 68 aa9.47□□□□□ -0.89
ATG4B-201ENST00000344376 TRBV10-3A0A0K0K1G6 114 aa9.46□□□□□ -0.89
ATG4B-201ENST00000344376 ETDCA0A1B0GVM5 59 aa9.46□□□□□ -0.89
ATG4B-201ENST00000344376 LINC00337Q8N6G1 96 aa9.46□□□□□ -0.89
ATG4B-201ENST00000344376 PPDPFQ9H3Y8 114 aa9.46□□□□□ -0.89
ATG4B-201ENST00000344376 TRBV10-2A0A0K0K1G8 114 aa9.46□□□□□ -0.9
ATG4B-201ENST00000344376 IFITM1P13164 125 aa9.46□□□□□ -0.9
ATG4B-201ENST00000344376 ZNF706Q9Y5V0 76 aaPredicted RBP9.46□□□□□ -0.9
ATG4B-201ENST00000344376 A0A0B4J2C4 111 aa9.45□□□□□ -0.9
ATG4B-201ENST00000344376 TSPAN13O95857 204 aa9.45□□□□□ -0.9
ATG4B-201ENST00000344376 PRR4Q16378 134 aa9.45□□□□□ -0.9
ATG4B-201ENST00000344376 KRTAP13-2Q52LG2 175 aa9.45□□□□□ -0.9
ATG4B-201ENST00000344376 COPS9Q8WXC6 57 aa9.45□□□□□ -0.9
ATG4B-201ENST00000344376 SPRR1AP35321 89 aa9.44□□□□□ -0.9
ATG4B-201ENST00000344376 NDUFC2O95298 119 aa9.43□□□□□ -0.9
ATG4B-201ENST00000344376 LYRM7Q5U5X0 104 aa9.43□□□□□ -0.9
ATG4B-201ENST00000344376 S100A7L2Q5SY68 101 aa9.42□□□□□ -0.9
ATG4B-201ENST00000344376 LINC00304Q8N9R0 145 aa9.42□□□□□ -0.9
ATG4B-201ENST00000344376 PRO0461Q9UI25 63 aa9.42□□□□□ -0.9
ATG4B-201ENST00000344376 A4D1N5 150 aa9.41□□□□□ -0.9
ATG4B-201ENST00000344376 CFC1BP0CG36 223 aa9.41□□□□□ -0.9
ATG4B-201ENST00000344376 CFC1P0CG37 223 aa9.41□□□□□ -0.9
ATG4B-201ENST00000344376 MUSTN1Q8IVN3 82 aa9.41□□□□□ -0.9
ATG4B-201ENST00000344376 SPRR4Q96PI1 79 aa9.41□□□□□ -0.9
ATG4B-201ENST00000344376 PRO1854Q9UHT4 67 aa9.41□□□□□ -0.9
ATG4B-201ENST00000344376 NPC2P61916 151 aa9.41□□□□□ -0.9
ATG4B-201ENST00000344376 KRTAP4-16G5E9R7 235 aaPredicted RBP9.4□□□□□ -0.9
ATG4B-201ENST00000344376 J3QR89 54 aa9.39□□□□□ -0.91
ATG4B-201ENST00000344376 ADAMTSL4-AS1Q5T5F5 129 aa9.39□□□□□ -0.91
ATG4B-201ENST00000344376 SCGB1A1P11684 91 aa9.38□□□□□ -0.91
ATG4B-201ENST00000344376 SMCR5Q8TEV8 140 aa9.38□□□□□ -0.91
ATG4B-201ENST00000344376 SOSTDC1Q6X4U4 206 aa9.37□□□□□ -0.91
ATG4B-201ENST00000344376 B5MCH6 92 aa9.37□□□□□ -0.91
ATG4B-201ENST00000344376 H3BMG7 143 aa9.37□□□□□ -0.91
ATG4B-201ENST00000344376 IGLV6-57P01721 117 aa9.37□□□□□ -0.91
ATG4B-201ENST00000344376 C3orf22Q8N5N4 141 aa9.37□□□□□ -0.91
ATG4B-201ENST00000344376 TRAV23DV6A0A075B6W5 121 aa9.36□□□□□ -0.91
ATG4B-201ENST00000344376 TRBV20-1A0A075B6N2 111 aa9.35□□□□□ -0.91
ATG4B-201ENST00000344376 LINC00308Q8TCZ7 52 aa9.35□□□□□ -0.91
ATG4B-201ENST00000344376 EIF4EBP3O60516 100 aaPredicted RBP9.34□□□□□ -0.91
ATG4B-201ENST00000344376 Q6ZRX8 168 aa9.34□□□□□ -0.91
ATG4B-201ENST00000344376 RNF213Q63HN8 5207 aa9.33□□□□□ -0.92
ATG4B-201ENST00000344376 ZNF73O43830 326 aaPredicted RBP9.33□□□□□ -0.92
ATG4B-201ENST00000344376 LPAP08519 4548 aa9.32□□□□□ -0.92
ATG4B-201ENST00000344376 ETDBQ3ZM63 59 aa9.32□□□□□ -0.92
ATG4B-201ENST00000344376 GAGE2AQ6NT46 116 aa9.32□□□□□ -0.92
ATG4B-201ENST00000344376 SPAG11AQ6PDA7 123 aa9.32□□□□□ -0.92
ATG4B-201ENST00000344376 SIGMAR1Q99720 223 aa9.32□□□□□ -0.92
ATG4B-201ENST00000344376 SMCPP49901 116 aaPredicted RBP9.31□□□□□ -0.92
ATG4B-201ENST00000344376 LINC00483Q53H64 154 aa9.31□□□□□ -0.92
ATG4B-201ENST00000344376 C4orf48Q5BLP8 95 aa9.31□□□□□ -0.92
ATG4B-201ENST00000344376 OR13C6PQ8NH95 151 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms