RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 LOC107984640A0A0U1RRK4 108 aa9.62□□□□□ -0.87
CXCL12-201ENST00000343575 NDUFC2O95298 119 aa9.62□□□□□ -0.87
CXCL12-201ENST00000343575 SLPIP03973 132 aa9.62□□□□□ -0.87
CXCL12-201ENST00000343575 DPH3Q96FX2 82 aa9.62□□□□□ -0.87
CXCL12-201ENST00000343575 NCR3O14931 201 aa9.6□□□□□ -0.87
CXCL12-201ENST00000343575 C9orf116Q5BN46 136 aaPredicted RBP9.6□□□□□ -0.87
CXCL12-201ENST00000343575 DNAH6Q9C0G6 4158 aa9.6□□□□□ -0.87
CXCL12-201ENST00000343575 ZNF561-AS1K7EIQ3 104 aa9.59□□□□□ -0.87
CXCL12-201ENST00000343575 C9orf129Q5T035 196 aaKnown RBP9.59□□□□□ -0.87
CXCL12-201ENST00000343575 LRCOL1A6NCL2 159 aa9.59□□□□□ -0.87
CXCL12-201ENST00000343575 C6orf48Q9UBA6 75 aa9.59□□□□□ -0.87
CXCL12-201ENST00000343575 DNAH2Q9P225 4427 aa9.59□□□□□ -0.87
CXCL12-201ENST00000343575 Q6ZRU5 148 aa9.58□□□□□ -0.88
CXCL12-201ENST00000343575 H3BQ85 93 aa9.57□□□□□ -0.88
CXCL12-201ENST00000343575 PSCAO43653 123 aa9.57□□□□□ -0.88
CXCL12-201ENST00000343575 PFN2P35080 140 aa9.57□□□□□ -0.88
CXCL12-201ENST00000343575 COX17Q14061 63 aa9.57□□□□□ -0.88
CXCL12-201ENST00000343575 Q8N814 137 aa9.57□□□□□ -0.88
CXCL12-201ENST00000343575 UBL5Q9BZL1 73 aa9.57□□□□□ -0.88
CXCL12-201ENST00000343575 CAMK2N2Q96S95 79 aa9.56□□□□□ -0.88
CXCL12-201ENST00000343575 SACSQ9NZJ4 4579 aa9.55□□□□□ -0.88
CXCL12-201ENST00000343575 A0A087WVE0 104 aa9.55□□□□□ -0.88
CXCL12-201ENST00000343575 GHRHP01286 108 aa9.53□□□□□ -0.88
CXCL12-201ENST00000343575 SYCNQ0VAF6 134 aa9.53□□□□□ -0.88
CXCL12-201ENST00000343575 C1orf134Q5TEV5 83 aa9.53□□□□□ -0.88
CXCL12-201ENST00000343575 F8WDY8 70 aa9.53□□□□□ -0.88
CXCL12-201ENST00000343575 PDE6GP18545 87 aa9.51□□□□□ -0.89
CXCL12-201ENST00000343575 CYSTM1Q9H1C7 97 aa9.51□□□□□ -0.89
CXCL12-201ENST00000343575 LCE6AA0A183 80 aa9.51□□□□□ -0.89
CXCL12-201ENST00000343575 A0A087WTM6 91 aa9.5□□□□□ -0.89
CXCL12-201ENST00000343575 LOC110117498A0A087WWA1 95 aa9.5□□□□□ -0.89
CXCL12-201ENST00000343575 DNAH17Q9UFH2 4485 aa9.5□□□□□ -0.89
CXCL12-201ENST00000343575 RTL8CO15255 209 aa9.49□□□□□ -0.89
CXCL12-201ENST00000343575 CNBPP62633 177 aaKnown RBP9.49□□□□□ -0.89
CXCL12-201ENST00000343575 TRAV7A0A075B6U4 112 aa9.49□□□□□ -0.89
CXCL12-201ENST00000343575 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.48□□□□□ -0.89
CXCL12-201ENST00000343575 Q6ZRP5 223 aa9.48□□□□□ -0.89
CXCL12-201ENST00000343575 KMT2CQ8NEZ4 4911 aaKnown RBP9.47□□□□□ -0.89
CXCL12-201ENST00000343575 Q8NDZ9 215 aa9.47□□□□□ -0.89
CXCL12-201ENST00000343575 DSCR8Q96T75 97 aa9.47□□□□□ -0.89
CXCL12-201ENST00000343575 RBM3P98179 157 aaKnown RBP9.47□□□□□ -0.89
CXCL12-201ENST00000343575 C14orf177Q52M58 125 aa9.47□□□□□ -0.89
CXCL12-201ENST00000343575 FRAS1Q86XX4 4008 aa9.46□□□□□ -0.89
CXCL12-201ENST00000343575 TNP2Q05952 138 aa9.46□□□□□ -0.9
CXCL12-201ENST00000343575 LINC00575Q6W349 94 aa9.46□□□□□ -0.9
CXCL12-201ENST00000343575 TRAV23DV6A0A075B6W5 121 aa9.45□□□□□ -0.9
CXCL12-201ENST00000343575 TLX1NBP0CAT3 122 aa9.45□□□□□ -0.9
CXCL12-201ENST00000343575 Q6ZQT0 140 aa9.45□□□□□ -0.9
CXCL12-201ENST00000343575 XAGE1AQ9HD64 81 aa9.45□□□□□ -0.9
CXCL12-201ENST00000343575 FAM236DA0A1B0GTK5 79 aa9.45□□□□□ -0.9
CXCL12-201ENST00000343575 FAM236CP0DP71 79 aa9.45□□□□□ -0.9
CXCL12-201ENST00000343575 SERP1Q9Y6X1 66 aa9.45□□□□□ -0.9
CXCL12-201ENST00000343575 FAM19A1Q7Z5A9 133 aa9.44□□□□□ -0.9
CXCL12-201ENST00000343575 FUSP35637 526 aaKnown RBP eCLIP9.43□□□□□ -0.9
CXCL12-201ENST00000343575 CXCL6P80162 114 aa9.43□□□□□ -0.9
CXCL12-201ENST00000343575 RYR2Q92736 4967 aa9.43□□□□□ -0.9
CXCL12-201ENST00000343575 EPM2AB3EWF7 344 aa9.42□□□□□ -0.9
CXCL12-201ENST00000343575 OXTP01178 125 aa9.42□□□□□ -0.9
CXCL12-201ENST00000343575 C6orf99Q4VX62 202 aa9.42□□□□□ -0.9
CXCL12-201ENST00000343575 C20orf197Q8N268 126 aa9.42□□□□□ -0.9
CXCL12-201ENST00000343575 C9orf163Q8N9P6 203 aa9.42□□□□□ -0.9
CXCL12-201ENST00000343575 FAT2Q9NYQ8 4349 aa9.41□□□□□ -0.9
CXCL12-201ENST00000343575 NDUFC1O43677 76 aa9.41□□□□□ -0.9
CXCL12-201ENST00000343575 PRR3P79522 188 aaKnown RBP9.41□□□□□ -0.9
CXCL12-201ENST00000343575 KLKP1Q107X0 134 aa9.41□□□□□ -0.9
CXCL12-201ENST00000343575 Q5XG85 94 aa9.41□□□□□ -0.9
CXCL12-201ENST00000343575 ATP5EP56381 51 aaPredicted RBP9.39□□□□□ -0.91
CXCL12-201ENST00000343575 LAMTOR3Q9UHA4 124 aa9.39□□□□□ -0.91
CXCL12-201ENST00000343575 LINC01547P58512 204 aaPredicted RBP9.38□□□□□ -0.91
CXCL12-201ENST00000343575 KRTAP7-1Q8IUC3 87 aa9.38□□□□□ -0.91
CXCL12-201ENST00000343575 DNAH11Q96DT5 4516 aa9.38□□□□□ -0.91
CXCL12-201ENST00000343575 A0A096LNI7 61 aa9.38□□□□□ -0.91
CXCL12-201ENST00000343575 HECTD4Q9Y4D8 3996 aa9.37□□□□□ -0.91
CXCL12-201ENST00000343575 H7BZZ5 65 aa9.36□□□□□ -0.91
CXCL12-201ENST00000343575 VPREB1P12018 145 aa9.36□□□□□ -0.91
CXCL12-201ENST00000343575 KRTAP10-2P60368 255 aa9.36□□□□□ -0.91
CXCL12-201ENST00000343575 Q6ZVQ6 151 aa9.36□□□□□ -0.91
CXCL12-201ENST00000343575 FAM168BA1KXE4 195 aa9.36□□□□□ -0.91
CXCL12-201ENST00000343575 C16orf90A8MZG2 172 aa9.36□□□□□ -0.91
CXCL12-201ENST00000343575 IGLV6-57P01721 117 aa9.36□□□□□ -0.91
CXCL12-201ENST00000343575 C4orf26Q17RF5 130 aa9.36□□□□□ -0.91
CXCL12-201ENST00000343575 SERTAD4-AS1Q5TG53 156 aa9.35□□□□□ -0.91
CXCL12-201ENST00000343575 TRBV7-6A0A0J9YX20 115 aa9.34□□□□□ -0.91
CXCL12-201ENST00000343575 PANO1I0J062 215 aa9.34□□□□□ -0.91
CXCL12-201ENST00000343575 CHTF8P0CG12 524 aa9.34□□□□□ -0.91
CXCL12-201ENST00000343575 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.34□□□□□ -0.91
CXCL12-201ENST00000343575 HAMPP81172 84 aa9.34□□□□□ -0.91
CXCL12-201ENST00000343575 HRCT1Q6UXD1 115 aa9.33□□□□□ -0.92
CXCL12-201ENST00000343575 SMIM26A0A096LP01 95 aa9.32□□□□□ -0.92
CXCL12-201ENST00000343575 IGKV2-24A0A0C4DH68 120 aa9.32□□□□□ -0.92
CXCL12-201ENST00000343575 ERC2-IT1O76042 136 aa9.32□□□□□ -0.92
CXCL12-201ENST00000343575 PLA2G2DQ9UNK4 145 aa9.32□□□□□ -0.92
CXCL12-201ENST00000343575 DNAH5Q8TE73 4624 aa9.32□□□□□ -0.92
CXCL12-201ENST00000343575 PKD1P98161 4303 aa9.31□□□□□ -0.92
CXCL12-201ENST00000343575 IGLV5-52A0A0A0MRZ9 124 aa9.31□□□□□ -0.92
CXCL12-201ENST00000343575 A0A1W2PNN7 141 aa9.31□□□□□ -0.92
CXCL12-201ENST00000343575 DIRC1Q969H9 104 aa9.31□□□□□ -0.92
CXCL12-201ENST00000343575 TRBV7-4A0A0J9YYF1 115 aa9.3□□□□□ -0.92
CXCL12-201ENST00000343575 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.3□□□□□ -0.92
CXCL12-201ENST00000343575 Q6ZQY7 126 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms