RNA–Protein interactions for RNA: ENST00000339600.5

NDUFA4-201, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA4, Length 2,130 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-201ENST00000339600 CELSR1Q9NYQ6 3014 aa4.73□□□□□ -1.65
NDUFA4-201ENST00000339600 ANKHD1Q8IWZ3 2542 aaKnown RBP4.73□□□□□ -1.65
NDUFA4-201ENST00000339600 H3BPC8 53 aa4.72□□□□□ -1.65
NDUFA4-201ENST00000339600 DSCR9P59020 149 aa4.72□□□□□ -1.65
NDUFA4-201ENST00000339600 LINC00476Q8WZB0 136 aa4.72□□□□□ -1.65
NDUFA4-201ENST00000339600 ROS1P08922 2347 aa4.72□□□□□ -1.65
NDUFA4-201ENST00000339600 RTL8CO15255 209 aa4.72□□□□□ -1.65
NDUFA4-201ENST00000339600 USMG5Q96IX5 58 aa4.72□□□□□ -1.65
NDUFA4-201ENST00000339600 DCHS2Q6V1P9 2916 aa4.71□□□□□ -1.66
NDUFA4-201ENST00000339600 IGHV3-11P01762 117 aa4.71□□□□□ -1.66
NDUFA4-201ENST00000339600 C5orf56Q8N8D9 126 aa4.71□□□□□ -1.66
NDUFA4-201ENST00000339600 ZNF706Q9Y5V0 76 aaPredicted RBP4.71□□□□□ -1.66
NDUFA4-201ENST00000339600 CR1P17927 2039 aa4.71□□□□□ -1.66
NDUFA4-201ENST00000339600 IGHV4-28A0A0C4DH34 117 aa4.7□□□□□ -1.66
NDUFA4-201ENST00000339600 IGHV4-61A0A0C4DH41 118 aa4.7□□□□□ -1.66
NDUFA4-201ENST00000339600 DSCR10P59022 87 aa4.7□□□□□ -1.66
NDUFA4-201ENST00000339600 C9orf163Q8N9P6 203 aa4.7□□□□□ -1.66
NDUFA4-201ENST00000339600 RETNLBQ9BQ08 111 aa4.7□□□□□ -1.66
NDUFA4-201ENST00000339600 RP1L1Q8IWN7 2480 aaPredicted RBP4.7□□□□□ -1.66
NDUFA4-201ENST00000339600 TRGV4A0A0C4DH28 118 aa4.7□□□□□ -1.66
NDUFA4-201ENST00000339600 IGLV1-51P01701 117 aa4.7□□□□□ -1.66
NDUFA4-201ENST00000339600 HTN1P15515 57 aa4.7□□□□□ -1.66
NDUFA4-201ENST00000339600 SPAG11BQ08648 103 aa4.7□□□□□ -1.66
NDUFA4-201ENST00000339600 SVEP1Q4LDE5 3571 aa4.7□□□□□ -1.66
NDUFA4-201ENST00000339600 A0A1W2PNM2 257 aa4.69□□□□□ -1.66
NDUFA4-201ENST00000339600 LYNX1G3V0Z9 82 aa4.69□□□□□ -1.66
NDUFA4-201ENST00000339600 H3BUA1 57 aa4.69□□□□□ -1.66
NDUFA4-201ENST00000339600 LYNX1P0DP58 116 aa4.69□□□□□ -1.66
NDUFA4-201ENST00000339600 NIPBLQ6KC79 2804 aaeCLIP4.69□□□□□ -1.66
NDUFA4-201ENST00000339600 CCDC168Q8NDH2 2452 aa4.69□□□□□ -1.66
NDUFA4-201ENST00000339600 IGKV3OR2-268A0A0C4DH90 116 aa4.68□□□□□ -1.66
NDUFA4-201ENST00000339600 LINC00959A0A1B0GUT2 108 aa4.68□□□□□ -1.66
NDUFA4-201ENST00000339600 ZFP36P26651 326 aaKnown RBP4.68□□□□□ -1.66
NDUFA4-201ENST00000339600 IGLV7-46A0A075B6I9 117 aa4.67□□□□□ -1.66
NDUFA4-201ENST00000339600 K7EQZ3 153 aa4.67□□□□□ -1.66
NDUFA4-201ENST00000339600 IGLV5-48A0A075B6I7 105 aa4.66□□□□□ -1.66
NDUFA4-201ENST00000339600 IGHV6-1A0A0B4J1U7 121 aa4.66□□□□□ -1.66
NDUFA4-201ENST00000339600 IGKV2D-24A0A075B6R9 120 aa4.65□□□□□ -1.67
NDUFA4-201ENST00000339600 A0A0A0MQY5 61 aa4.65□□□□□ -1.67
NDUFA4-201ENST00000339600 KRTAP10-9P60411 292 aa4.65□□□□□ -1.67
NDUFA4-201ENST00000339600 SPAG11AQ6PDA7 123 aa4.65□□□□□ -1.67
NDUFA4-201ENST00000339600 IGLV1-40P01703 118 aa4.64□□□□□ -1.67
NDUFA4-201ENST00000339600 FBXL19-AS1Q494R0 122 aa4.64□□□□□ -1.67
NDUFA4-201ENST00000339600 ZNF702PQ9H963 129 aa4.64□□□□□ -1.67
NDUFA4-201ENST00000339600 H0Y9P7 68 aa4.64□□□□□ -1.67
NDUFA4-201ENST00000339600 KPRPQ5T749 579 aaPredicted RBP4.64□□□□□ -1.67
NDUFA4-201ENST00000339600 LINC00528Q8N1L1 170 aa4.64□□□□□ -1.67
NDUFA4-201ENST00000339600 DNAJC9-AS1A6NH13 148 aa4.63□□□□□ -1.67
NDUFA4-201ENST00000339600 DEFB112Q30KQ8 113 aa4.63□□□□□ -1.67
NDUFA4-201ENST00000339600 CSAG1Q6PB30 78 aa4.63□□□□□ -1.67
NDUFA4-201ENST00000339600 Q6ZR54 194 aa4.63□□□□□ -1.67
NDUFA4-201ENST00000339600 C1orf134Q5TEV5 83 aa4.62□□□□□ -1.67
NDUFA4-201ENST00000339600 SPRR4Q96PI1 79 aa4.62□□□□□ -1.67
NDUFA4-201ENST00000339600 KRTAP29-1A8MX34 341 aaPredicted RBP4.61□□□□□ -1.67
NDUFA4-201ENST00000339600 CSMD2Q7Z408 3487 aa4.61□□□□□ -1.67
NDUFA4-201ENST00000339600 IGLV1-50A0A075B6I6 118 aa4.61□□□□□ -1.67
NDUFA4-201ENST00000339600 TRGV1A0A0A0MS02 117 aa4.61□□□□□ -1.67
NDUFA4-201ENST00000339600 Q8NBF4 154 aa4.61□□□□□ -1.67
NDUFA4-201ENST00000339600 INSP01308 110 aa4.6□□□□□ -1.67
NDUFA4-201ENST00000339600 C11orf71Q6IPW1 123 aa4.6□□□□□ -1.67
NDUFA4-201ENST00000339600 WNK1Q9H4A3 2382 aa4.6□□□□□ -1.67
NDUFA4-201ENST00000339600 A0A0J9YWU9 116 aa4.59□□□□□ -1.67
NDUFA4-201ENST00000339600 FBN1P35555 2871 aaKnown RBP4.59□□□□□ -1.67
NDUFA4-201ENST00000339600 ROMO1P60602 79 aa4.59□□□□□ -1.67
NDUFA4-201ENST00000339600 Q8N377 158 aa4.59□□□□□ -1.67
NDUFA4-201ENST00000339600 NSD1Q96L73 2696 aaPredicted RBP4.59□□□□□ -1.67
NDUFA4-201ENST00000339600 STAB1Q9NY15 2570 aa4.59□□□□□ -1.68
NDUFA4-201ENST00000339600 FN1P02751 2386 aaKnown RBP4.59□□□□□ -1.68
NDUFA4-201ENST00000339600 CSPG4Q6UVK1 2322 aa4.59□□□□□ -1.68
NDUFA4-201ENST00000339600 HRNRQ86YZ3 2850 aaPredicted RBP4.58□□□□□ -1.68
NDUFA4-201ENST00000339600 IGLV5-37A0A075B6J1 123 aa4.58□□□□□ -1.68
NDUFA4-201ENST00000339600 A0A1B0GUV1 79 aa4.58□□□□□ -1.68
NDUFA4-201ENST00000339600 DEFB131AP59861 70 aa4.58□□□□□ -1.68
NDUFA4-201ENST00000339600 TNP2Q05952 138 aa4.58□□□□□ -1.68
NDUFA4-201ENST00000339600 SPATA8Q6RVD6 105 aa4.58□□□□□ -1.68
NDUFA4-201ENST00000339600 WFDC13Q8IUB5 93 aa4.58□□□□□ -1.68
NDUFA4-201ENST00000339600 NBEAL1Q6ZS30 2694 aa4.58□□□□□ -1.68
NDUFA4-201ENST00000339600 VPS13CQ709C8 3753 aa4.57□□□□□ -1.68
NDUFA4-201ENST00000339600 LCE2BO14633 110 aa4.57□□□□□ -1.68
NDUFA4-201ENST00000339600 DEFB116Q30KQ4 102 aa4.57□□□□□ -1.68
NDUFA4-201ENST00000339600 COL6A5A8TX70 2615 aa4.57□□□□□ -1.68
NDUFA4-201ENST00000339600 AKAP6Q13023 2319 aa4.56□□□□□ -1.68
NDUFA4-201ENST00000339600 C1orf137Q5JT78 98 aa4.56□□□□□ -1.68
NDUFA4-201ENST00000339600 NOTCH2NLQ7Z3S9 236 aa4.56□□□□□ -1.68
NDUFA4-201ENST00000339600 ACANP16112 2415 aa4.56□□□□□ -1.68
NDUFA4-201ENST00000339600 ATRQ13535 2644 aa4.56□□□□□ -1.68
NDUFA4-201ENST00000339600 GVQW2A0A096LPI5 108 aaPredicted RBP4.55□□□□□ -1.68
NDUFA4-201ENST00000339600 A6NDX4 124 aa4.55□□□□□ -1.68
NDUFA4-201ENST00000339600 HRES1P13985 223 aa4.55□□□□□ -1.68
NDUFA4-201ENST00000339600 UNQ6190/PRO20217Q6UXQ8 127 aa4.55□□□□□ -1.68
NDUFA4-201ENST00000339600 C19orf73Q9NVV2 129 aa4.55□□□□□ -1.68
NDUFA4-201ENST00000339600 C7orf33Q8WU49 177 aa4.55□□□□□ -1.68
NDUFA4-201ENST00000339600 WFDC10BQ8IUB3 73 aa4.54□□□□□ -1.68
NDUFA4-201ENST00000339600 JMJD1CQ15652 2540 aa4.53□□□□□ -1.68
NDUFA4-201ENST00000339600 FLNAP21333 2647 aaKnown RBP4.53□□□□□ -1.68
NDUFA4-201ENST00000339600 CHCHD10Q8WYQ3 142 aaPredicted RBP4.53□□□□□ -1.68
NDUFA4-201ENST00000339600 SMR3AQ99954 134 aa4.53□□□□□ -1.68
NDUFA4-201ENST00000339600 CLPSL2Q6UWE3 100 aa4.52□□□□□ -1.69
NDUFA4-201ENST00000339600 MAP6D1Q9H9H5 199 aa4.52□□□□□ -1.69
NDUFA4-201ENST00000339600 X6R8D5 127 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms