RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 SMIM26A0A096LP01 95 aa12.52□□□□□ -0.4
PSPC1-201ENST00000338910 TRBV7-4A0A0J9YYF1 115 aa12.52□□□□□ -0.4
PSPC1-201ENST00000338910 TM2D3Q9BRN9 247 aa12.52□□□□□ -0.4
PSPC1-201ENST00000338910 MDFIQ99750 246 aa12.51□□□□□ -0.41
PSPC1-201ENST00000338910 NDUFC1O43677 76 aa12.5□□□□□ -0.41
PSPC1-201ENST00000338910 SPAG11BQ08648 103 aa12.5□□□□□ -0.41
PSPC1-201ENST00000338910 PRR34Q9NV39 138 aa12.49□□□□□ -0.41
PSPC1-201ENST00000338910 SCXQ7RTU7 201 aa12.49□□□□□ -0.41
PSPC1-201ENST00000338910 WFDC10BQ8IUB3 73 aa12.49□□□□□ -0.41
PSPC1-201ENST00000338910 K7EIL1 84 aa12.48□□□□□ -0.41
PSPC1-201ENST00000338910 C11orf45Q8TAV5 145 aa12.48□□□□□ -0.41
PSPC1-201ENST00000338910 H3BNG1 76 aa12.48□□□□□ -0.41
PSPC1-201ENST00000338910 DIRC1Q969H9 104 aa12.47□□□□□ -0.41
PSPC1-201ENST00000338910 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.47□□□□□ -0.41
PSPC1-201ENST00000338910 DEFB131BA0A096LNP1 70 aa12.46□□□□□ -0.41
PSPC1-201ENST00000338910 TRBV7-6A0A0J9YX20 115 aa12.45□□□□□ -0.42
PSPC1-201ENST00000338910 ATP5EP56381 51 aaPredicted RBP12.45□□□□□ -0.42
PSPC1-201ENST00000338910 ESRGQ1W209 222 aa12.45□□□□□ -0.42
PSPC1-201ENST00000338910 NREPQ16612 68 aa12.45□□□□□ -0.42
PSPC1-201ENST00000338910 HUWE1Q7Z6Z7 4374 aaKnown RBP12.43□□□□□ -0.42
PSPC1-201ENST00000338910 ZNF73O43830 326 aaPredicted RBP12.42□□□□□ -0.42
PSPC1-201ENST00000338910 BPY2O14599 106 aa12.42□□□□□ -0.42
PSPC1-201ENST00000338910 COX7BP24311 80 aa12.42□□□□□ -0.42
PSPC1-201ENST00000338910 TMEM254Q8TBM7 123 aa12.42□□□□□ -0.42
PSPC1-201ENST00000338910 LINC00474Q9P2X8 69 aa12.42□□□□□ -0.42
PSPC1-201ENST00000338910 GVQW2A0A096LPI5 108 aaPredicted RBP12.41□□□□□ -0.42
PSPC1-201ENST00000338910 ELOF1P60002 83 aaKnown RBP12.41□□□□□ -0.42
PSPC1-201ENST00000338910 ERC2-IT1O76042 136 aa12.41□□□□□ -0.42
PSPC1-201ENST00000338910 PKIGQ9Y2B9 76 aa12.41□□□□□ -0.42
PSPC1-201ENST00000338910 XAGE1AQ9HD64 81 aa12.4□□□□□ -0.42
PSPC1-201ENST00000338910 C6orf48Q9UBA6 75 aa12.39□□□□□ -0.43
PSPC1-201ENST00000338910 COL7A1Q02388 2944 aa12.37□□□□□ -0.43
PSPC1-201ENST00000338910 C1orf195Q5TG92 126 aa12.37□□□□□ -0.43
PSPC1-201ENST00000338910 STAB2Q8WWQ8 2551 aa12.36□□□□□ -0.43
PSPC1-201ENST00000338910 IGKV4-1P06312 121 aa12.35□□□□□ -0.43
PSPC1-201ENST00000338910 Q8N9L7 120 aa12.35□□□□□ -0.43
PSPC1-201ENST00000338910 OCR1Q9BZK8 76 aa12.33□□□□□ -0.43
PSPC1-201ENST00000338910 HIGD2BQ4VC39 106 aa12.33□□□□□ -0.44
PSPC1-201ENST00000338910 A0A0U1RQV1 116 aa12.32□□□□□ -0.44
PSPC1-201ENST00000338910 VPREB1P12018 145 aa12.32□□□□□ -0.44
PSPC1-201ENST00000338910 KRTAP26-1Q6PEX3 210 aa12.32□□□□□ -0.44
PSPC1-201ENST00000338910 FAM229BQ4G0N7 80 aa12.31□□□□□ -0.44
PSPC1-201ENST00000338910 LINC00528Q8N1L1 170 aa12.31□□□□□ -0.44
PSPC1-201ENST00000338910 PRYO14603 147 aa12.3□□□□□ -0.44
PSPC1-201ENST00000338910 LINC01556Q5JQF7 62 aa12.3□□□□□ -0.44
PSPC1-201ENST00000338910 IGKV2D-24A0A075B6R9 120 aa12.28□□□□□ -0.44
PSPC1-201ENST00000338910 DNAH9Q9NYC9 4486 aa12.28□□□□□ -0.44
PSPC1-201ENST00000338910 M0R378 163 aa12.27□□□□□ -0.45
PSPC1-201ENST00000338910 CAMK2N2Q96S95 79 aa12.27□□□□□ -0.45
PSPC1-201ENST00000338910 C15orf56Q8N910 161 aa12.25□□□□□ -0.45
PSPC1-201ENST00000338910 LINC00588Q9Y4M8 146 aa12.25□□□□□ -0.45
PSPC1-201ENST00000338910 FUSP35637 526 aaKnown RBP eCLIP12.24□□□□□ -0.45
PSPC1-201ENST00000338910 BRK1Q8WUW1 75 aa12.24□□□□□ -0.45
PSPC1-201ENST00000338910 DNAH10OSP0CZ25 163 aa12.23□□□□□ -0.45
PSPC1-201ENST00000338910 Q6ZRU5 148 aa12.22□□□□□ -0.45
PSPC1-201ENST00000338910 MPLKIPQ8TAP9 179 aa12.22□□□□□ -0.45
PSPC1-201ENST00000338910 C3orf84H3BNL1 204 aa12.21□□□□□ -0.45
PSPC1-201ENST00000338910 HIGD2AQ9BW72 106 aa12.21□□□□□ -0.45
PSPC1-201ENST00000338910 LYSTQ99698 3801 aa12.19□□□□□ -0.46
PSPC1-201ENST00000338910 DNHD1Q96M86 4753 aa12.17□□□□□ -0.46
PSPC1-201ENST00000338910 B9D2Q9BPU9 175 aa12.16□□□□□ -0.46
PSPC1-201ENST00000338910 IGLV5-48A0A075B6I7 105 aa12.15□□□□□ -0.46
PSPC1-201ENST00000338910 Q8N377 158 aa12.15□□□□□ -0.47
PSPC1-201ENST00000338910 TENM2Q9NT68 2774 aa12.14□□□□□ -0.47
PSPC1-201ENST00000338910 LCE6AA0A183 80 aa12.13□□□□□ -0.47
PSPC1-201ENST00000338910 SMIM29Q86T20 159 aa12.13□□□□□ -0.47
PSPC1-201ENST00000338910 SYCNQ0VAF6 134 aa12.12□□□□□ -0.47
PSPC1-201ENST00000338910 CASC10Q5T4H9 136 aa12.12□□□□□ -0.47
PSPC1-201ENST00000338910 CSMD3Q7Z407 3707 aa12.12□□□□□ -0.47
PSPC1-201ENST00000338910 Q6ZRP5 223 aa12.11□□□□□ -0.47
PSPC1-201ENST00000338910 DEFB105AQ8NG35 78 aa12.11□□□□□ -0.47
PSPC1-201ENST00000338910 FAM30AQ9NZY2 134 aa12.11□□□□□ -0.47
PSPC1-201ENST00000338910 KCNQ1DNQ9H478 68 aa12.1□□□□□ -0.47
PSPC1-201ENST00000338910 PRKDCP78527 4128 aaKnown RBP12.1□□□□□ -0.47
PSPC1-201ENST00000338910 A0A1B0GW54 56 aa12.09□□□□□ -0.47
PSPC1-201ENST00000338910 hDV103S1A0JD37 113 aa12.09□□□□□ -0.47
PSPC1-201ENST00000338910 MEGF8Q7Z7M0 2845 aa12.09□□□□□ -0.47
PSPC1-201ENST00000338910 DNAH1Q9P2D7 4330 aa12.08□□□□□ -0.48
PSPC1-201ENST00000338910 A0A1W2PNM2 257 aa12.08□□□□□ -0.48
PSPC1-201ENST00000338910 ZCCHC13Q8WW36 166 aaKnown RBP12.05□□□□□ -0.48
PSPC1-201ENST00000338910 TNP2Q05952 138 aa12.04□□□□□ -0.48
PSPC1-201ENST00000338910 PMAIP1Q13794 54 aa12.04□□□□□ -0.48
PSPC1-201ENST00000338910 C7orf33Q8WU49 177 aa12.04□□□□□ -0.48
PSPC1-201ENST00000338910 SERTAD4-AS1Q5TG53 156 aa12.03□□□□□ -0.48
PSPC1-201ENST00000338910 NKAPP1Q8N9T2 125 aa12.03□□□□□ -0.48
PSPC1-201ENST00000338910 DNAH7Q8WXX0 4024 aa12.02□□□□□ -0.49
PSPC1-201ENST00000338910 C1orf64Q8NEQ6 169 aa12.02□□□□□ -0.49
PSPC1-201ENST00000338910 C1orf137Q5JT78 98 aa12.01□□□□□ -0.49
PSPC1-201ENST00000338910 Q8NBF4 154 aa12.01□□□□□ -0.49
PSPC1-201ENST00000338910 DYNC2H1Q8NCM8 4307 aaKnown RBP12.01□□□□□ -0.49
PSPC1-201ENST00000338910 DSCR10P59022 87 aa12.01□□□□□ -0.49
PSPC1-201ENST00000338910 DHRS4-AS1Q9P1J3 65 aa12.01□□□□□ -0.49
PSPC1-201ENST00000338910 APLNQ9ULZ1 77 aa12.01□□□□□ -0.49
PSPC1-201ENST00000338910 Q1T7F1 81 aa12□□□□□ -0.49
PSPC1-201ENST00000338910 Q6ZRX8 168 aa12□□□□□ -0.49
PSPC1-201ENST00000338910 PLECQ15149 4684 aaKnown RBP12□□□□□ -0.49
PSPC1-201ENST00000338910 Q9BRP9 147 aa12□□□□□ -0.49
PSPC1-201ENST00000338910 ETDCA0A1B0GVM5 59 aa11.99□□□□□ -0.49
PSPC1-201ENST00000338910 SPRR4Q96PI1 79 aa11.99□□□□□ -0.49
PSPC1-201ENST00000338910 KRTAP1-5Q9BYS1 174 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms