RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 TIAM2Q8IVF5 1701 aa0.32□□□□□ -2.36
XRCC4-202ENST00000338635 CSMD3Q7Z407 3707 aa0.32□□□□□ -2.36
XRCC4-202ENST00000338635 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.32□□□□□ -2.365e-6■■■■□ 22.8
XRCC4-202ENST00000338635 KLK9Q2XQG4 91 aa0.32□□□□□ -2.36
XRCC4-202ENST00000338635 H1FX-AS1Q4G0G2 97 aa0.32□□□□□ -2.36
XRCC4-202ENST00000338635 HILPDAQ9Y5L2 63 aa0.32□□□□□ -2.36
XRCC4-202ENST00000338635 NWD1Q149M9 1564 aa0.31□□□□□ -2.36
XRCC4-202ENST00000338635 DNMBPQ6XZF7 1577 aa0.31□□□□□ -2.36
XRCC4-202ENST00000338635 PREX1Q8TCU6 1659 aa0.31□□□□□ -2.36
XRCC4-202ENST00000338635 CNOT1A5YKK6 2376 aaKnown RBP0.31□□□□□ -2.36
XRCC4-202ENST00000338635 LMTK2Q8IWU2 1503 aa0.31□□□□□ -2.36
XRCC4-202ENST00000338635 OTOGQ6ZRI0 2925 aa0.31□□□□□ -2.36
XRCC4-202ENST00000338635 CFAP43Q8NDM7 1665 aa0.31□□□□□ -2.36
XRCC4-202ENST00000338635 C3orf79P0CE67 100 aa0.31□□□□□ -2.36
XRCC4-202ENST00000338635 PIEZO1Q92508 2521 aa0.31□□□□□ -2.36
XRCC4-202ENST00000338635 IGF2RP11717 2491 aa0.3□□□□□ -2.36
XRCC4-202ENST00000338635 GVINP1Q7Z2Y8 2422 aa0.3□□□□□ -2.36
XRCC4-202ENST00000338635 ZC3H13Q5T200 1668 aaKnown RBP0.3□□□□□ -2.36
XRCC4-202ENST00000338635 RALGAPBQ86X10 1494 aa0.3□□□□□ -2.36
XRCC4-202ENST00000338635 A0A087WWC5 75 aa0.3□□□□□ -2.36
XRCC4-202ENST00000338635 MRPL33O75394 65 aaKnown RBP0.3□□□□□ -2.36
XRCC4-202ENST00000338635 NDUFA3O95167 84 aa0.3□□□□□ -2.36
XRCC4-202ENST00000338635 ENHOQ6UWT2 76 aa0.3□□□□□ -2.36
XRCC4-202ENST00000338635 WFDC13Q8IUB5 93 aa0.3□□□□□ -2.36
XRCC4-202ENST00000338635 UBL5Q9BZL1 73 aa0.3□□□□□ -2.36
XRCC4-202ENST00000338635 ASXL1Q8IXJ9 1541 aa0.3□□□□□ -2.36
XRCC4-202ENST00000338635 DSTQ03001 7570 aaKnown RBP0.29□□□□□ -2.36
XRCC4-202ENST00000338635 LELP1Q5T871 98 aa0.29□□□□□ -2.36
XRCC4-202ENST00000338635 PRO3102Q9H379 93 aa0.29□□□□□ -2.36
XRCC4-202ENST00000338635 EFCAB5A4FU69 1503 aa0.29□□□□□ -2.36
XRCC4-202ENST00000338635 ERICH3Q5RHP9 1530 aa0.29□□□□□ -2.36
XRCC4-202ENST00000338635 ADAMTS12P58397 1594 aa0.29□□□□□ -2.36
XRCC4-202ENST00000338635 DIP2AQ14689 1571 aa0.29□□□□□ -2.36
XRCC4-202ENST00000338635 CDC42BPGQ6DT37 1551 aa0.29□□□□□ -2.36
XRCC4-202ENST00000338635 RICTORQ6R327 1708 aa0.29□□□□□ -2.36
XRCC4-202ENST00000338635 NESP48681 1621 aa0.29□□□□□ -2.36
XRCC4-202ENST00000338635 PLCH1Q4KWH8 1693 aa0.28□□□□□ -2.36
XRCC4-202ENST00000338635 TNRC6CQ9HCJ0 1690 aaKnown RBP0.28□□□□□ -2.36
XRCC4-202ENST00000338635 DEFB131BA0A096LNP1 70 aa0.28□□□□□ -2.36
XRCC4-202ENST00000338635 S100ZQ8WXG8 99 aa0.28□□□□□ -2.36
XRCC4-202ENST00000338635 KCNQ1DNQ9H478 68 aa0.28□□□□□ -2.36
XRCC4-202ENST00000338635 USP24Q9UPU5 2620 aa0.28□□□□□ -2.36
XRCC4-202ENST00000338635 TENM4Q6N022 2769 aa0.28□□□□□ -2.36
XRCC4-202ENST00000338635 HFM1A2PYH4 1435 aa0.28□□□□□ -2.36
XRCC4-202ENST00000338635 VWFP04275 2813 aa0.28□□□□□ -2.36
XRCC4-202ENST00000338635 MROH1Q8NDA8 1641 aa0.28□□□□□ -2.36
XRCC4-202ENST00000338635 EIF2AK4Q9P2K8 1649 aaKnown RBP0.28□□□□□ -2.36
XRCC4-202ENST00000338635 LINC00158P58513 81 aa0.28□□□□□ -2.37
XRCC4-202ENST00000338635 CSPG4Q6UVK1 2322 aa0.28□□□□□ -2.37
XRCC4-202ENST00000338635 ZFYVE26Q68DK2 2539 aa0.27□□□□□ -2.37
XRCC4-202ENST00000338635 ABCA9Q8IUA7 1624 aa0.27□□□□□ -2.37
XRCC4-202ENST00000338635 ITSN1Q15811 1721 aa0.27□□□□□ -2.37
XRCC4-202ENST00000338635 DDX60LQ5H9U9 1706 aaKnown RBP0.27□□□□□ -2.37
XRCC4-202ENST00000338635 NCOR1O75376 2440 aa0.27□□□□□ -2.37
XRCC4-202ENST00000338635 UNC79Q9P2D8 2635 aa0.27□□□□□ -2.37
XRCC4-202ENST00000338635 ETDCA0A1B0GVM5 59 aa0.27□□□□□ -2.37
XRCC4-202ENST00000338635 LOC730098B7Z3J9 87 aa0.27□□□□□ -2.37
XRCC4-202ENST00000338635 MADDQ8WXG6 1647 aa0.27□□□□□ -2.37
XRCC4-202ENST00000338635 CICQ96RK0 1608 aaPredicted RBP0.27□□□□□ -2.37
XRCC4-202ENST00000338635 WIZO95785 1651 aa0.26□□□□□ -2.37
XRCC4-202ENST00000338635 NHSQ6T4R5 1651 aa0.26□□□□□ -2.37
XRCC4-202ENST00000338635 REV3LO60673 3130 aa0.26□□□□□ -2.37
XRCC4-202ENST00000338635 PARP4Q9UKK3 1724 aaKnown RBP0.26□□□□□ -2.37
XRCC4-202ENST00000338635 NAV2Q8IVL1 2488 aa0.26□□□□□ -2.37
XRCC4-202ENST00000338635 SPTA1P02549 2419 aa0.26□□□□□ -2.37
XRCC4-202ENST00000338635 LINC01549A6NIU2 74 aa0.26□□□□□ -2.37
XRCC4-202ENST00000338635 WNK2Q9Y3S1 2297 aa0.26□□□□□ -2.37
XRCC4-202ENST00000338635 BSNQ9UPA5 3926 aa0.26□□□□□ -2.37
XRCC4-202ENST00000338635 CHD6Q8TD26 2715 aa0.26□□□□□ -2.37
XRCC4-202ENST00000338635 INO80Q9ULG1 1556 aaPredicted RBP0.26□□□□□ -2.37
XRCC4-202ENST00000338635 DEFB114Q30KQ6 69 aa0.25□□□□□ -2.37
XRCC4-202ENST00000338635 KRTAP21-1Q3LI58 79 aa0.25□□□□□ -2.37
XRCC4-202ENST00000338635 SMIM5Q71RC9 77 aa0.25□□□□□ -2.37
XRCC4-202ENST00000338635 KNL1Q8NG31 2342 aa0.25□□□□□ -2.37
XRCC4-202ENST00000338635 ATRQ13535 2644 aa0.25□□□□□ -2.37
XRCC4-202ENST00000338635 C4AP0C0L4 1744 aa0.25□□□□□ -2.37
XRCC4-202ENST00000338635 C4BP0C0L5 1744 aa0.25□□□□□ -2.37
XRCC4-202ENST00000338635 TJP1Q07157 1748 aa0.25□□□□□ -2.37
XRCC4-202ENST00000338635 NRAPQ86VF7 1730 aa0.25□□□□□ -2.37
XRCC4-202ENST00000338635 CRIP1P50238 77 aa0.24□□□□□ -2.37
XRCC4-202ENST00000338635 THOC2Q8NI27 1593 aaKnown RBP0.24□□□□□ -2.37
XRCC4-202ENST00000338635 PKD1L1Q8TDX9 2849 aa0.24□□□□□ -2.37
XRCC4-202ENST00000338635 PTPN13Q12923 2485 aa0.24□□□□□ -2.37
XRCC4-202ENST00000338635 SSPOA2VEC9 5147 aa0.24□□□□□ -2.37
XRCC4-202ENST00000338635 CHD8Q9HCK8 2581 aa0.24□□□□□ -2.37
XRCC4-202ENST00000338635 FAT2Q9NYQ8 4349 aa0.24□□□□□ -2.37
XRCC4-202ENST00000338635 BPTFQ12830 3046 aa0.24□□□□□ -2.37
XRCC4-202ENST00000338635 DEPDC5O75140 1603 aa0.24□□□□□ -2.37
XRCC4-202ENST00000338635 LRP1Q07954 4544 aaKnown RBP0.23□□□□□ -2.37
XRCC4-202ENST00000338635 LYNX1G3V0Z9 82 aa0.23□□□□□ -2.37
XRCC4-202ENST00000338635 H0YAA0 97 aa0.23□□□□□ -2.37
XRCC4-202ENST00000338635 M0R2T5 61 aa0.23□□□□□ -2.37
XRCC4-202ENST00000338635 SFTA3P0C7M3 94 aa0.23□□□□□ -2.37
XRCC4-202ENST00000338635 SYNE1Q8NF91 8797 aaKnown RBP0.23□□□□□ -2.37
XRCC4-202ENST00000338635 PDE4DIPQ5VU43 2346 aa0.23□□□□□ -2.37
XRCC4-202ENST00000338635 ABCA2Q9BZC7 2435 aa0.23□□□□□ -2.37
XRCC4-202ENST00000338635 HUWE1Q7Z6Z7 4374 aaKnown RBP0.23□□□□□ -2.37
XRCC4-202ENST00000338635 CCDC180Q9P1Z9 1646 aa0.23□□□□□ -2.37
XRCC4-202ENST00000338635 K7EMI3 77 aa0.23□□□□□ -2.37
XRCC4-202ENST00000338635 DEFB135Q30KP9 77 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms