RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 LYRM7Q5U5X0 104 aa10.79□□□□□ -0.68
CHGA-202ENST00000334654 A0A1B0GV90 55 aa10.78□□□□□ -0.68
CHGA-202ENST00000334654 K7ERJ3 54 aa10.77□□□□□ -0.69
CHGA-202ENST00000334654 RPL37AP61513 92 aaKnown RBP10.77□□□□□ -0.69
CHGA-202ENST00000334654 Q5VSD8 79 aa10.77□□□□□ -0.69
CHGA-202ENST00000334654 KCNQ1DNQ9H478 68 aa10.77□□□□□ -0.69
CHGA-202ENST00000334654 A0A1W2PPM0 123 aa10.76□□□□□ -0.69
CHGA-202ENST00000334654 FAM229AH3BQW9 127 aa10.76□□□□□ -0.69
CHGA-202ENST00000334654 H3BUT2 72 aa10.76□□□□□ -0.69
CHGA-202ENST00000334654 FABP2P12104 132 aa10.76□□□□□ -0.69
CHGA-202ENST00000334654 S100A7L2Q5SY68 101 aa10.75□□□□□ -0.69
CHGA-202ENST00000334654 KRTAP4-5Q9BYR2 181 aa10.74□□□□□ -0.69
CHGA-202ENST00000334654 TMEM126AQ9H061 195 aa10.74□□□□□ -0.69
CHGA-202ENST00000334654 SPRR1AP35321 89 aa10.74□□□□□ -0.69
CHGA-202ENST00000334654 C1orf137Q5JT78 98 aa10.74□□□□□ -0.69
CHGA-202ENST00000334654 GTF2H5Q6ZYL4 71 aa10.74□□□□□ -0.69
CHGA-202ENST00000334654 OR13C6PQ8NH95 151 aa10.74□□□□□ -0.69
CHGA-202ENST00000334654 PRYO14603 147 aa10.73□□□□□ -0.69
CHGA-202ENST00000334654 TSPAN13O95857 204 aa10.73□□□□□ -0.69
CHGA-202ENST00000334654 VAMP3Q15836 100 aa10.73□□□□□ -0.69
CHGA-202ENST00000334654 REG3GQ6UW15 175 aa10.73□□□□□ -0.69
CHGA-202ENST00000334654 KRTAP4-16G5E9R7 235 aaPredicted RBP10.72□□□□□ -0.69
CHGA-202ENST00000334654 PLA2G1BP04054 148 aaKnown RBP10.72□□□□□ -0.69
CHGA-202ENST00000334654 COX6CP09669 75 aa10.72□□□□□ -0.69
CHGA-202ENST00000334654 TRBV20-1A0A075B6N2 111 aa10.71□□□□□ -0.69
CHGA-202ENST00000334654 BCE1O60756 84 aa10.71□□□□□ -0.69
CHGA-202ENST00000334654 IGLV7-43P04211 117 aa10.7□□□□□ -0.7
CHGA-202ENST00000334654 TRAV23DV6A0A075B6W5 121 aa10.69□□□□□ -0.7
CHGA-202ENST00000334654 KRTAP13-1Q8IUC0 172 aa10.69□□□□□ -0.7
CHGA-202ENST00000334654 CBY1Q9Y3M2 126 aa10.69□□□□□ -0.7
CHGA-202ENST00000334654 RPL13AP40429 203 aaKnown RBP10.68□□□□□ -0.7
CHGA-202ENST00000334654 UBE2V1Q13404 147 aa10.68□□□□□ -0.7
CHGA-202ENST00000334654 Q1RN00 199 aa10.68□□□□□ -0.7
CHGA-202ENST00000334654 PSMB2P49721 201 aa10.68□□□□□ -0.7
CHGA-202ENST00000334654 ZNF73O43830 326 aaPredicted RBP10.67□□□□□ -0.7
CHGA-202ENST00000334654 RPL28P46779 137 aaKnown RBP10.67□□□□□ -0.7
CHGA-202ENST00000334654 SPCS1Q9Y6A9 102 aa10.67□□□□□ -0.7
CHGA-202ENST00000334654 K7EP34 96 aa10.66□□□□□ -0.7
CHGA-202ENST00000334654 SCGB1C2P0DMR2 95 aa10.66□□□□□ -0.7
CHGA-202ENST00000334654 SMIM11BQ8TCY0 68 aa10.66□□□□□ -0.7
CHGA-202ENST00000334654 FAM19A1Q7Z5A9 133 aa10.65□□□□□ -0.7
CHGA-202ENST00000334654 B5MCH6 92 aa10.64□□□□□ -0.71
CHGA-202ENST00000334654 ZNF861PO60384 105 aa10.64□□□□□ -0.71
CHGA-202ENST00000334654 PRLHP81277 87 aa10.64□□□□□ -0.71
CHGA-202ENST00000334654 PKHD1L1Q86WI1 4243 aa10.64□□□□□ -0.71
CHGA-202ENST00000334654 H7C2G1 150 aa10.63□□□□□ -0.71
CHGA-202ENST00000334654 C6orf99Q4VX62 202 aa10.63□□□□□ -0.71
CHGA-202ENST00000334654 NAA38Q9BRA0 125 aaKnown RBP10.63□□□□□ -0.71
CHGA-202ENST00000334654 ETDCA0A1B0GVM5 59 aa10.62□□□□□ -0.71
CHGA-202ENST00000334654 H0Y9J4 135 aa10.62□□□□□ -0.71
CHGA-202ENST00000334654 H0YGX0 51 aa10.62□□□□□ -0.71
CHGA-202ENST00000334654 ABCA13Q86UQ4 5058 aa10.62□□□□□ -0.71
CHGA-202ENST00000334654 TRIAP1O43715 76 aa10.61□□□□□ -0.71
CHGA-202ENST00000334654 UBE2AP49459 152 aa10.61□□□□□ -0.71
CHGA-202ENST00000334654 DIRC1Q969H9 104 aa10.61□□□□□ -0.71
CHGA-202ENST00000334654 SPINK6Q6UWN8 80 aa10.6□□□□□ -0.71
CHGA-202ENST00000334654 Q6ZRX8 168 aa10.6□□□□□ -0.71
CHGA-202ENST00000334654 FLG2Q5D862 2391 aaPredicted RBP10.59□□□□□ -0.71
CHGA-202ENST00000334654 TRBV7-6A0A0J9YX20 115 aa10.59□□□□□ -0.71
CHGA-202ENST00000334654 ATXN8Q156A1 80 aa10.59□□□□□ -0.71
CHGA-202ENST00000334654 Q9BRP9 147 aa10.59□□□□□ -0.71
CHGA-202ENST00000334654 ELOF1P60002 83 aaKnown RBP10.58□□□□□ -0.72
CHGA-202ENST00000334654 SMCR5Q8TEV8 140 aa10.58□□□□□ -0.72
CHGA-202ENST00000334654 F8W1H4 67 aa10.57□□□□□ -0.72
CHGA-202ENST00000334654 COX7BP24311 80 aa10.56□□□□□ -0.72
CHGA-202ENST00000334654 TCL1BO95988 128 aa10.55□□□□□ -0.72
CHGA-202ENST00000334654 A0A1B0GX51 115 aa10.55□□□□□ -0.72
CHGA-202ENST00000334654 ERC2-IT1O76042 136 aa10.55□□□□□ -0.72
CHGA-202ENST00000334654 SNCGO76070 127 aa10.55□□□□□ -0.72
CHGA-202ENST00000334654 HIGD2AQ9BW72 106 aa10.55□□□□□ -0.72
CHGA-202ENST00000334654 H3BMG7 143 aa10.54□□□□□ -0.72
CHGA-202ENST00000334654 LST1O00453 97 aa10.54□□□□□ -0.72
CHGA-202ENST00000334654 INAFM2P0DMQ5 153 aa10.54□□□□□ -0.72
CHGA-202ENST00000334654 TRACP01848 142 aa10.53□□□□□ -0.72
CHGA-202ENST00000334654 LINC01600Q96MT4 127 aa10.51□□□□□ -0.73
CHGA-202ENST00000334654 KRTAP1-4P0C5Y4 121 aa10.5□□□□□ -0.73
CHGA-202ENST00000334654 DHRS4-AS1Q9P1J3 65 aa10.49□□□□□ -0.73
CHGA-202ENST00000334654 LINC00575Q6W349 94 aa10.49□□□□□ -0.73
CHGA-202ENST00000334654 PCLOQ9Y6V0 5065 aa10.48□□□□□ -0.73
CHGA-202ENST00000334654 MYCBP2O75592 4640 aa10.48□□□□□ -0.73
CHGA-202ENST00000334654 LRP1Q07954 4544 aaKnown RBP10.48□□□□□ -0.73
CHGA-202ENST00000334654 CLEC2BQ92478 149 aa10.46□□□□□ -0.74
CHGA-202ENST00000334654 FAM218AQ96MZ4 157 aa10.46□□□□□ -0.74
CHGA-202ENST00000334654 SPRR4Q96PI1 79 aa10.46□□□□□ -0.74
CHGA-202ENST00000334654 PRO0461Q9UI25 63 aa10.46□□□□□ -0.74
CHGA-202ENST00000334654 ST20-AS1Q8NBB2 130 aa10.45□□□□□ -0.74
CHGA-202ENST00000334654 H3BQ85 93 aa10.44□□□□□ -0.74
CHGA-202ENST00000334654 H3BT86 120 aa10.44□□□□□ -0.74
CHGA-202ENST00000334654 GHRHP01286 108 aa10.44□□□□□ -0.74
CHGA-202ENST00000334654 ANAPC11Q9NYG5 84 aa10.44□□□□□ -0.74
CHGA-202ENST00000334654 FAT3Q8TDW7 4589 aa10.44□□□□□ -0.74
CHGA-202ENST00000334654 DNAL4O96015 105 aa10.43□□□□□ -0.74
CHGA-202ENST00000334654 hADV29S1A0JD25 119 aa10.42□□□□□ -0.74
CHGA-202ENST00000334654 C9JAW5 83 aa10.42□□□□□ -0.74
CHGA-202ENST00000334654 SLC25A20O43772 301 aa10.42□□□□□ -0.74
CHGA-202ENST00000334654 ANKRD29Q8N6D5 301 aa10.42□□□□□ -0.74
CHGA-202ENST00000334654 LINC01547P58512 204 aaPredicted RBP10.41□□□□□ -0.74
CHGA-202ENST00000334654 LINC00483Q53H64 154 aa10.4□□□□□ -0.74
CHGA-202ENST00000334654 ZNF706Q9Y5V0 76 aaPredicted RBP10.4□□□□□ -0.74
CHGA-202ENST00000334654 GAGE2AQ6NT46 116 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms