RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 SCXQ7RTU7 201 aa12.27□□□□□ -0.44
RFTN1-201ENST00000334133 ATOX1O00244 68 aa12.27□□□□□ -0.45
RFTN1-201ENST00000334133 FAM19A5Q7Z5A7 132 aaPredicted RBP12.26□□□□□ -0.45
RFTN1-201ENST00000334133 DNAH1Q9P2D7 4330 aa12.26□□□□□ -0.45
RFTN1-201ENST00000334133 UQCRQO14949 82 aa12.26□□□□□ -0.45
RFTN1-201ENST00000334133 Q6ZVQ6 151 aa12.26□□□□□ -0.45
RFTN1-201ENST00000334133 COX7CP15954 63 aa12.25□□□□□ -0.45
RFTN1-201ENST00000334133 KRTAP7-1Q8IUC3 87 aa12.24□□□□□ -0.45
RFTN1-201ENST00000334133 UPK3BQ9BT76 320 aa12.24□□□□□ -0.45
RFTN1-201ENST00000334133 TRBV7-6A0A0J9YX20 115 aa12.24□□□□□ -0.45
RFTN1-201ENST00000334133 CYSTM1Q9H1C7 97 aa12.24□□□□□ -0.45
RFTN1-201ENST00000334133 KRTAP1-5Q9BYS1 174 aa12.23□□□□□ -0.45
RFTN1-201ENST00000334133 LINC01547P58512 204 aaPredicted RBP12.23□□□□□ -0.45
RFTN1-201ENST00000334133 TRBV7-4A0A0J9YYF1 115 aa12.22□□□□□ -0.45
RFTN1-201ENST00000334133 KCNQ1DNQ9H478 68 aa12.22□□□□□ -0.45
RFTN1-201ENST00000334133 DNAH9Q9NYC9 4486 aa12.2□□□□□ -0.46
RFTN1-201ENST00000334133 F8WDY8 70 aa12.19□□□□□ -0.46
RFTN1-201ENST00000334133 GHRHP01286 108 aa12.18□□□□□ -0.46
RFTN1-201ENST00000334133 ATP5EP2Q5VTU8 51 aa12.18□□□□□ -0.46
RFTN1-201ENST00000334133 ST20-AS1Q8NBB2 130 aa12.18□□□□□ -0.46
RFTN1-201ENST00000334133 IGKV2-24A0A0C4DH68 120 aa12.18□□□□□ -0.46
RFTN1-201ENST00000334133 TLX1NBP0CAT3 122 aa12.18□□□□□ -0.46
RFTN1-201ENST00000334133 Q9BRP9 147 aa12.18□□□□□ -0.46
RFTN1-201ENST00000334133 Q8N377 158 aa12.17□□□□□ -0.46
RFTN1-201ENST00000334133 SMIM20Q8N5G0 67 aa12.17□□□□□ -0.46
RFTN1-201ENST00000334133 RMI2Q96E14 147 aa12.17□□□□□ -0.46
RFTN1-201ENST00000334133 SERP2Q8N6R1 65 aa12.16□□□□□ -0.46
RFTN1-201ENST00000334133 IGLV1-50A0A075B6I6 118 aa12.16□□□□□ -0.46
RFTN1-201ENST00000334133 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.16□□□□□ -0.46
RFTN1-201ENST00000334133 C3orf84H3BNL1 204 aa12.16□□□□□ -0.46
RFTN1-201ENST00000334133 PDE6GP18545 87 aa12.16□□□□□ -0.46
RFTN1-201ENST00000334133 ETDCA0A1B0GVM5 59 aa12.15□□□□□ -0.46
RFTN1-201ENST00000334133 H3BQ85 93 aa12.15□□□□□ -0.46
RFTN1-201ENST00000334133 DNAH7Q8WXX0 4024 aa12.15□□□□□ -0.46
RFTN1-201ENST00000334133 MDFIQ99750 246 aa12.15□□□□□ -0.47
RFTN1-201ENST00000334133 Q6ZRX8 168 aa12.14□□□□□ -0.47
RFTN1-201ENST00000334133 SRRM2Q9UQ35 2752 aaKnown RBP12.14□□□□□ -0.47
RFTN1-201ENST00000334133 ERC2-IT1O76042 136 aa12.14□□□□□ -0.47
RFTN1-201ENST00000334133 Q8N9L7 120 aa12.14□□□□□ -0.47
RFTN1-201ENST00000334133 MRPL55Q7Z7F7 128 aaKnown RBP12.13□□□□□ -0.47
RFTN1-201ENST00000334133 UBE2DNLQ8IWF7 75 aa12.13□□□□□ -0.47
RFTN1-201ENST00000334133 PSCAO43653 123 aa12.13□□□□□ -0.47
RFTN1-201ENST00000334133 KRTAP4-16G5E9R7 235 aaPredicted RBP12.11□□□□□ -0.47
RFTN1-201ENST00000334133 UBE2BP63146 152 aa12.11□□□□□ -0.47
RFTN1-201ENST00000334133 LOC107984640A0A0U1RRK4 108 aa12.1□□□□□ -0.47
RFTN1-201ENST00000334133 CRYGAP11844 174 aa12.1□□□□□ -0.47
RFTN1-201ENST00000334133 A0A096LNI7 61 aa12.09□□□□□ -0.47
RFTN1-201ENST00000334133 PLA2G2DQ9UNK4 145 aa12.09□□□□□ -0.47
RFTN1-201ENST00000334133 PRYO14603 147 aa12.07□□□□□ -0.48
RFTN1-201ENST00000334133 A0A0G2JQZ4 141 aa12.06□□□□□ -0.48
RFTN1-201ENST00000334133 A0A1W2PNN7 141 aa12.06□□□□□ -0.48
RFTN1-201ENST00000334133 CHTF8P0CG12 524 aa12.06□□□□□ -0.48
RFTN1-201ENST00000334133 DHRS4-AS1Q9P1J3 65 aa12.06□□□□□ -0.48
RFTN1-201ENST00000334133 IGLV5-37A0A075B6J1 123 aa12.05□□□□□ -0.48
RFTN1-201ENST00000334133 SPRR1AP35321 89 aa12.05□□□□□ -0.48
RFTN1-201ENST00000334133 PRLHP81277 87 aa12.04□□□□□ -0.48
RFTN1-201ENST00000334133 C20orf197Q8N268 126 aa12.04□□□□□ -0.48
RFTN1-201ENST00000334133 CXCL6P80162 114 aa12.03□□□□□ -0.48
RFTN1-201ENST00000334133 NREPQ16612 68 aa12.03□□□□□ -0.48
RFTN1-201ENST00000334133 APLNQ9ULZ1 77 aa12.03□□□□□ -0.48
RFTN1-201ENST00000334133 PLECQ15149 4684 aaKnown RBP12.03□□□□□ -0.48
RFTN1-201ENST00000334133 REG3GQ6UW15 175 aa12.03□□□□□ -0.48
RFTN1-201ENST00000334133 BPY2O14599 106 aa12.02□□□□□ -0.49
RFTN1-201ENST00000334133 IGLV5-48A0A075B6I7 105 aa12□□□□□ -0.49
RFTN1-201ENST00000334133 A0A1W2PNM2 257 aa12□□□□□ -0.49
RFTN1-201ENST00000334133 C1orf137Q5JT78 98 aa12□□□□□ -0.49
RFTN1-201ENST00000334133 HIGD2AQ9BW72 106 aa11.98□□□□□ -0.49
RFTN1-201ENST00000334133 KRTAP11-1Q8IUC1 163 aa11.97□□□□□ -0.49
RFTN1-201ENST00000334133 C16orf90A8MZG2 172 aa11.97□□□□□ -0.49
RFTN1-201ENST00000334133 PHF5AQ7RTV0 110 aaKnown RBP11.96□□□□□ -0.49
RFTN1-201ENST00000334133 SNURFQ9Y675 71 aa11.95□□□□□ -0.5
RFTN1-201ENST00000334133 FUSP35637 526 aaKnown RBP eCLIP11.95□□□□□ -0.5
RFTN1-201ENST00000334133 TNP2Q05952 138 aa11.94□□□□□ -0.5
RFTN1-201ENST00000334133 CNBPP62633 177 aaKnown RBP11.93□□□□□ -0.5
RFTN1-201ENST00000334133 B9D2Q9BPU9 175 aa11.93□□□□□ -0.5
RFTN1-201ENST00000334133 IGKV4-1P06312 121 aa11.92□□□□□ -0.5
RFTN1-201ENST00000334133 TRAV7A0A075B6U4 112 aa11.91□□□□□ -0.5
RFTN1-201ENST00000334133 SMIM29Q86T20 159 aa11.91□□□□□ -0.5
RFTN1-201ENST00000334133 STARD9Q9P2P6 4700 aa11.89□□□□□ -0.51
RFTN1-201ENST00000334133 LINC00476Q8WZB0 136 aa11.89□□□□□ -0.51
RFTN1-201ENST00000334133 PRKDCP78527 4128 aaKnown RBP11.89□□□□□ -0.51
RFTN1-201ENST00000334133 PANO1I0J062 215 aa11.88□□□□□ -0.51
RFTN1-201ENST00000334133 Q8NBF4 154 aa11.88□□□□□ -0.51
RFTN1-201ENST00000334133 DPH3Q96FX2 82 aa11.88□□□□□ -0.51
RFTN1-201ENST00000334133 DEFB116Q30KQ4 102 aa11.87□□□□□ -0.51
RFTN1-201ENST00000334133 NBDYA0A0U1RRE5 68 aa11.86□□□□□ -0.51
RFTN1-201ENST00000334133 TMEM258P61165 79 aa11.86□□□□□ -0.51
RFTN1-201ENST00000334133 LRCOL1A6NCL2 159 aa11.85□□□□□ -0.51
RFTN1-201ENST00000334133 F8WEM9 126 aa11.85□□□□□ -0.51
RFTN1-201ENST00000334133 MEGF8Q7Z7M0 2845 aa11.84□□□□□ -0.51
RFTN1-201ENST00000334133 DYNC2H1Q8NCM8 4307 aaKnown RBP11.84□□□□□ -0.51
RFTN1-201ENST00000334133 IGFL1Q6UW32 110 aa11.83□□□□□ -0.52
RFTN1-201ENST00000334133 TGP01266 2768 aa11.83□□□□□ -0.52
RFTN1-201ENST00000334133 EPM2AB3EWF7 344 aa11.82□□□□□ -0.52
RFTN1-201ENST00000334133 C14orf177Q52M58 125 aa11.82□□□□□ -0.52
RFTN1-201ENST00000334133 C9orf163Q8N9P6 203 aa11.82□□□□□ -0.52
RFTN1-201ENST00000334133 J3KT08 172 aa11.8□□□□□ -0.52
RFTN1-201ENST00000334133 H7BZZ5 65 aa11.79□□□□□ -0.52
RFTN1-201ENST00000334133 OXTP01178 125 aa11.79□□□□□ -0.52
RFTN1-201ENST00000334133 SPRR4Q96PI1 79 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms