RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 GVQW2A0A096LPI5 108 aaPredicted RBP8.53□□□□□ -1.04
HMGCS1-201ENST00000325110 KRTAP10-11P60412 298 aa8.53□□□□□ -1.04
HMGCS1-201ENST00000325110 UBE2BP63146 152 aa8.53□□□□□ -1.04
HMGCS1-201ENST00000325110 FAM236DA0A1B0GTK5 79 aa8.52□□□□□ -1.05
HMGCS1-201ENST00000325110 FAM236CP0DP71 79 aa8.52□□□□□ -1.05
HMGCS1-201ENST00000325110 TRAV7A0A075B6U4 112 aa8.51□□□□□ -1.05
HMGCS1-201ENST00000325110 BPY2O14599 106 aa8.51□□□□□ -1.05
HMGCS1-201ENST00000325110 SERTAD4-AS1Q5TG53 156 aa8.51□□□□□ -1.05
HMGCS1-201ENST00000325110 C7orf33Q8WU49 177 aa8.5□□□□□ -1.05
HMGCS1-201ENST00000325110 TM2D3Q9BRN9 247 aa8.5□□□□□ -1.05
HMGCS1-201ENST00000325110 FAM168BA1KXE4 195 aa8.5□□□□□ -1.05
HMGCS1-201ENST00000325110 IGKV2-24A0A0C4DH68 120 aa8.5□□□□□ -1.05
HMGCS1-201ENST00000325110 F8WEM9 126 aa8.5□□□□□ -1.05
HMGCS1-201ENST00000325110 H3BQ85 93 aa8.49□□□□□ -1.05
HMGCS1-201ENST00000325110 LINC00528Q8N1L1 170 aa8.49□□□□□ -1.05
HMGCS1-201ENST00000325110 FUSP35637 526 aaKnown RBP eCLIP8.48□□□□□ -1.059e-7■□□□□ 8.8
HMGCS1-201ENST00000325110 HRCT1Q6UXD1 115 aa8.47□□□□□ -1.05
HMGCS1-201ENST00000325110 TRBV7-4A0A0J9YYF1 115 aa8.47□□□□□ -1.05
HMGCS1-201ENST00000325110 CASC10Q5T4H9 136 aa8.47□□□□□ -1.05
HMGCS1-201ENST00000325110 KMT2BQ9UMN6 2715 aaPredicted RBP8.46□□□□□ -1.06
HMGCS1-201ENST00000325110 CXCL6P80162 114 aa8.46□□□□□ -1.06
HMGCS1-201ENST00000325110 LINC01556Q5JQF7 62 aa8.46□□□□□ -1.06
HMGCS1-201ENST00000325110 ST20-AS1Q8NBB2 130 aa8.46□□□□□ -1.06
HMGCS1-201ENST00000325110 C4orf26Q17RF5 130 aa8.45□□□□□ -1.06
HMGCS1-201ENST00000325110 PSCAO43653 123 aa8.44□□□□□ -1.06
HMGCS1-201ENST00000325110 OXTP01178 125 aa8.43□□□□□ -1.06
HMGCS1-201ENST00000325110 STAB2Q8WWQ8 2551 aa8.43□□□□□ -1.06
HMGCS1-201ENST00000325110 KRTAP24-1Q3LI83 254 aa8.43□□□□□ -1.06
HMGCS1-201ENST00000325110 KRTAP26-1Q6PEX3 210 aa8.43□□□□□ -1.06
HMGCS1-201ENST00000325110 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.42□□□□□ -1.06
HMGCS1-201ENST00000325110 HIGD2AQ9BW72 106 aa8.42□□□□□ -1.06
HMGCS1-201ENST00000325110 A0A0G2JQZ4 141 aa8.42□□□□□ -1.06
HMGCS1-201ENST00000325110 A0A1W2PNN7 141 aa8.42□□□□□ -1.06
HMGCS1-201ENST00000325110 C1orf137Q5JT78 98 aa8.42□□□□□ -1.06
HMGCS1-201ENST00000325110 FAM30AQ9NZY2 134 aa8.41□□□□□ -1.06
HMGCS1-201ENST00000325110 H3BNG1 76 aa8.41□□□□□ -1.06
HMGCS1-201ENST00000325110 RPS28P62857 69 aaKnown RBP8.41□□□□□ -1.06
HMGCS1-201ENST00000325110 Q8N377 158 aa8.41□□□□□ -1.06
HMGCS1-201ENST00000325110 H7BZZ5 65 aa8.41□□□□□ -1.06
HMGCS1-201ENST00000325110 DEFB116Q30KQ4 102 aa8.41□□□□□ -1.06
HMGCS1-201ENST00000325110 TRBV7-6A0A0J9YX20 115 aa8.4□□□□□ -1.06
HMGCS1-201ENST00000325110 LINC00588Q9Y4M8 146 aa8.4□□□□□ -1.06
HMGCS1-201ENST00000325110 UBE2DNLQ8IWF7 75 aa8.39□□□□□ -1.07
HMGCS1-201ENST00000325110 TMEM254Q8TBM7 123 aa8.39□□□□□ -1.07
HMGCS1-201ENST00000325110 A0A096LNI7 61 aa8.38□□□□□ -1.07
HMGCS1-201ENST00000325110 C5orf47Q569G3 176 aa8.38□□□□□ -1.07
HMGCS1-201ENST00000325110 DHRS4-AS1Q9P1J3 65 aa8.38□□□□□ -1.07
HMGCS1-201ENST00000325110 Q6ZRX8 168 aa8.37□□□□□ -1.07
HMGCS1-201ENST00000325110 PRLHP81277 87 aa8.37□□□□□ -1.07
HMGCS1-201ENST00000325110 KCNQ1DNQ9H478 68 aa8.37□□□□□ -1.07
HMGCS1-201ENST00000325110 MRPL55Q7Z7F7 128 aaKnown RBP8.37□□□□□ -1.07
HMGCS1-201ENST00000325110 ERC2-IT1O76042 136 aa8.36□□□□□ -1.07
HMGCS1-201ENST00000325110 SMIM29Q86T20 159 aa8.36□□□□□ -1.07
HMGCS1-201ENST00000325110 MPLKIPQ8TAP9 179 aa8.35□□□□□ -1.07
HMGCS1-201ENST00000325110 IGKV4-1P06312 121 aa8.35□□□□□ -1.07
HMGCS1-201ENST00000325110 DNAH10OSP0CZ25 163 aa8.35□□□□□ -1.07
HMGCS1-201ENST00000325110 Q9BRP9 147 aa8.35□□□□□ -1.07
HMGCS1-201ENST00000325110 PRR4Q16378 134 aa8.34□□□□□ -1.07
HMGCS1-201ENST00000325110 KLKP1Q107X0 134 aa8.33□□□□□ -1.08
HMGCS1-201ENST00000325110 SERP1Q9Y6X1 66 aa8.33□□□□□ -1.08
HMGCS1-201ENST00000325110 WIPF1O43516 503 aa8.33□□□□□ -1.08
HMGCS1-201ENST00000325110 A0A1W2PNM2 257 aa8.33□□□□□ -1.08
HMGCS1-201ENST00000325110 WFDC13Q8IUB5 93 aa8.32□□□□□ -1.08
HMGCS1-201ENST00000325110 IGLV1-50A0A075B6I6 118 aa8.32□□□□□ -1.08
HMGCS1-201ENST00000325110 LRCOL1A6NCL2 159 aa8.32□□□□□ -1.08
HMGCS1-201ENST00000325110 PRYO14603 147 aa8.32□□□□□ -1.08
HMGCS1-201ENST00000325110 REG3GQ6UW15 175 aa8.31□□□□□ -1.08
HMGCS1-201ENST00000325110 TENM2Q9NT68 2774 aa8.3□□□□□ -1.08
HMGCS1-201ENST00000325110 BCE1O60756 84 aa8.3□□□□□ -1.08
HMGCS1-201ENST00000325110 LINC00474Q9P2X8 69 aa8.29□□□□□ -1.08
HMGCS1-201ENST00000325110 Q8NBF4 154 aa8.29□□□□□ -1.08
HMGCS1-201ENST00000325110 A0A087WSZ3 146 aa8.28□□□□□ -1.08
HMGCS1-201ENST00000325110 NDUFC1O43677 76 aa8.28□□□□□ -1.08
HMGCS1-201ENST00000325110 CHTF8P0CG12 524 aa8.28□□□□□ -1.08
HMGCS1-201ENST00000325110 K7EQZ3 153 aa8.28□□□□□ -1.08
HMGCS1-201ENST00000325110 LINC00476Q8WZB0 136 aa8.27□□□□□ -1.09
HMGCS1-201ENST00000325110 F8WDY8 70 aa8.27□□□□□ -1.09
HMGCS1-201ENST00000325110 UBE2AP49459 152 aa8.27□□□□□ -1.09
HMGCS1-201ENST00000325110 Q5XG85 94 aa8.26□□□□□ -1.09
HMGCS1-201ENST00000325110 IGLV5-48A0A075B6I7 105 aa8.26□□□□□ -1.09
HMGCS1-201ENST00000325110 SMIM26A0A096LP01 95 aa8.25□□□□□ -1.09
HMGCS1-201ENST00000325110 TLX1NBP0CAT3 122 aa8.23□□□□□ -1.09
HMGCS1-201ENST00000325110 OCR1Q9BZK8 76 aa8.23□□□□□ -1.09
HMGCS1-201ENST00000325110 SRRM2Q9UQ35 2752 aaKnown RBP8.23□□□□□ -1.09
HMGCS1-201ENST00000325110 RPL37AP61513 92 aaKnown RBP8.23□□□□□ -1.09
HMGCS1-201ENST00000325110 KRTAP7-1Q8IUC3 87 aa8.23□□□□□ -1.09
HMGCS1-201ENST00000325110 BRK1Q8WUW1 75 aa8.23□□□□□ -1.09
HMGCS1-201ENST00000325110 K7EIL1 84 aa8.22□□□□□ -1.09
HMGCS1-201ENST00000325110 PHF5AQ7RTV0 110 aaKnown RBP8.22□□□□□ -1.09
HMGCS1-201ENST00000325110 IGFL1Q6UW32 110 aa8.2□□□□□ -1.1
HMGCS1-201ENST00000325110 EPM2AB3EWF7 344 aa8.19□□□□□ -1.1
HMGCS1-201ENST00000325110 KRTAP4-16G5E9R7 235 aaPredicted RBP8.19□□□□□ -1.1
HMGCS1-201ENST00000325110 H0Y9J4 135 aa8.19□□□□□ -1.1
HMGCS1-201ENST00000325110 DSCR10P59022 87 aa8.19□□□□□ -1.1
HMGCS1-201ENST00000325110 KRTAP1-5Q9BYS1 174 aa8.19□□□□□ -1.1
HMGCS1-201ENST00000325110 PLA2G2DQ9UNK4 145 aa8.19□□□□□ -1.1
HMGCS1-201ENST00000325110 HCG22E2RYF7 251 aa8.18□□□□□ -1.1
HMGCS1-201ENST00000325110 A0A0U1RQV1 116 aa8.18□□□□□ -1.1
HMGCS1-201ENST00000325110 SPRR1AP35321 89 aa8.18□□□□□ -1.1
HMGCS1-201ENST00000325110 ATP5EP56381 51 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms