RNA–Protein interactions for RNA: ENST00000316881.8

TRIM25-201, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-201ENST00000316881 KRTAP10-3P60369 221 aa9.49□□□□□ -0.89
TRIM25-201ENST00000316881 PRR34Q9NV39 138 aa9.48□□□□□ -0.89
TRIM25-201ENST00000316881 MRPL34Q9BQ48 92 aaKnown RBP9.47□□□□□ -0.89
TRIM25-201ENST00000316881 EIF4EBP3O60516 100 aaPredicted RBP9.47□□□□□ -0.89
TRIM25-201ENST00000316881 SMR3BP02814 79 aaPredicted RBP9.46□□□□□ -0.9
TRIM25-201ENST00000316881 C9orf163Q8N9P6 203 aa9.46□□□□□ -0.9
TRIM25-201ENST00000316881 C15orf56Q8N910 161 aa9.44□□□□□ -0.9
TRIM25-201ENST00000316881 LINC00612Q8N6U2 182 aa9.42□□□□□ -0.9
TRIM25-201ENST00000316881 LINC00528Q8N1L1 170 aa9.41□□□□□ -0.9
TRIM25-201ENST00000316881 GIG44P09565 113 aaPredicted RBP9.41□□□□□ -0.9
TRIM25-201ENST00000316881 HECTD1Q9ULT8 2610 aa9.41□□□□□ -0.9
TRIM25-201ENST00000316881 APLNQ9ULZ1 77 aa9.41□□□□□ -0.9
TRIM25-201ENST00000316881 TLX1NBP0CAT3 122 aa9.4□□□□□ -0.91
TRIM25-201ENST00000316881 MGAM2Q2M2H8 2515 aa9.39□□□□□ -0.91
TRIM25-201ENST00000316881 RPS28P62857 69 aaKnown RBP9.39□□□□□ -0.91
TRIM25-201ENST00000316881 HTTP42858 3142 aa9.39□□□□□ -0.91
TRIM25-201ENST00000316881 IGLV7-43P04211 117 aa9.38□□□□□ -0.91
TRIM25-201ENST00000316881 IGFL1Q6UW32 110 aa9.38□□□□□ -0.91
TRIM25-201ENST00000316881 DSCR10P59022 87 aa9.38□□□□□ -0.91
TRIM25-201ENST00000316881 PLA2G2DQ9UNK4 145 aa9.38□□□□□ -0.91
TRIM25-201ENST00000316881 KRTAP1-3Q8IUG1 177 aa9.37□□□□□ -0.91
TRIM25-201ENST00000316881 K7EQZ3 153 aa9.36□□□□□ -0.91
TRIM25-201ENST00000316881 ZNF575Q86XF7 245 aa9.36□□□□□ -0.91
TRIM25-201ENST00000316881 OBSCN-AS1Q96MR7 158 aa9.36□□□□□ -0.91
TRIM25-201ENST00000316881 C9orf92A6NGG3 77 aa9.36□□□□□ -0.91
TRIM25-201ENST00000316881 C9orf129Q5T035 196 aaKnown RBP9.36□□□□□ -0.91
TRIM25-201ENST00000316881 C4orf26Q17RF5 130 aa9.35□□□□□ -0.91
TRIM25-201ENST00000316881 C8orf17Q9NRJ1 99 aa9.35□□□□□ -0.91
TRIM25-201ENST00000316881 IGLV8-61A0A075B6I0 122 aa9.35□□□□□ -0.91
TRIM25-201ENST00000316881 CHD9Q3L8U1 2897 aa9.33□□□□□ -0.92
TRIM25-201ENST00000316881 A0A1B0GVX0 72 aa9.33□□□□□ -0.92
TRIM25-201ENST00000316881 CNBPP62633 177 aaKnown RBP9.33□□□□□ -0.92
TRIM25-201ENST00000316881 KRTAP1-1Q07627 177 aa9.33□□□□□ -0.92
TRIM25-201ENST00000316881 RBM12B-AS1Q9P1G2 102 aa9.33□□□□□ -0.92
TRIM25-201ENST00000316881 USP24Q9UPU5 2620 aa9.32□□□□□ -0.92
TRIM25-201ENST00000316881 PSORS1C2Q9UIG4 136 aa9.32□□□□□ -0.92
TRIM25-201ENST00000316881 PRR15Q8IV56 129 aa9.32□□□□□ -0.92
TRIM25-201ENST00000316881 IGLV5-37A0A075B6J1 123 aa9.3□□□□□ -0.92
TRIM25-201ENST00000316881 PRO0628Q9UI54 55 aa9.3□□□□□ -0.92
TRIM25-201ENST00000316881 Q8N377 158 aa9.28□□□□□ -0.92
TRIM25-201ENST00000316881 LINC01600Q96MT4 127 aa9.28□□□□□ -0.92
TRIM25-201ENST00000316881 A0A1W2PNN7 141 aa9.28□□□□□ -0.92
TRIM25-201ENST00000316881 SPRR4Q96PI1 79 aa9.27□□□□□ -0.93
TRIM25-201ENST00000316881 ANAPC11Q9NYG5 84 aa9.27□□□□□ -0.93
TRIM25-201ENST00000316881 ERC2-IT1O76042 136 aa9.26□□□□□ -0.93
TRIM25-201ENST00000316881 CASC10Q5T4H9 136 aa9.24□□□□□ -0.93
TRIM25-201ENST00000316881 COA5Q86WW8 74 aa9.23□□□□□ -0.93
TRIM25-201ENST00000316881 A0A0C4DFX4 3053 aa9.22□□□□□ -0.93
TRIM25-201ENST00000316881 UQCR11O14957 56 aa9.21□□□□□ -0.94
TRIM25-201ENST00000316881 MKI67P46013 3256 aaKnown RBP9.2□□□□□ -0.94
TRIM25-201ENST00000316881 TNP2Q05952 138 aa9.2□□□□□ -0.94
TRIM25-201ENST00000316881 RANBP2P49792 3224 aaKnown RBP9.18□□□□□ -0.94
TRIM25-201ENST00000316881 A0A0G2JQZ4 141 aa9.18□□□□□ -0.94
TRIM25-201ENST00000316881 MAST4O15021 2626 aa9.16□□□□□ -0.94
TRIM25-201ENST00000316881 TRANK1O15050 2925 aa9.14□□□□□ -0.95
TRIM25-201ENST00000316881 SPINT4Q6UDR6 99 aa9.14□□□□□ -0.95
TRIM25-201ENST00000316881 Q6ZSA8 131 aa9.14□□□□□ -0.95
TRIM25-201ENST00000316881 CRIPTQ9P021 101 aa9.13□□□□□ -0.95
TRIM25-201ENST00000316881 CYP4F30PQ9H0H9 118 aa9.13□□□□□ -0.95
TRIM25-201ENST00000316881 ATRQ13535 2644 aa9.13□□□□□ -0.95
TRIM25-201ENST00000316881 KLKP1Q107X0 134 aa9.13□□□□□ -0.95
TRIM25-201ENST00000316881 FAM104AQ969W3 186 aa9.12□□□□□ -0.95
TRIM25-201ENST00000316881 LAMA3Q16787 3333 aa9.11□□□□□ -0.95
TRIM25-201ENST00000316881 IGLV7-46A0A075B6I9 117 aa9.11□□□□□ -0.95
TRIM25-201ENST00000316881 BRCA2P51587 3418 aa9.1□□□□□ -0.95
TRIM25-201ENST00000316881 HELZ2Q9BYK8 2649 aaKnown RBP9.1□□□□□ -0.95
TRIM25-201ENST00000316881 CD164Q04900 197 aa9.1□□□□□ -0.95
TRIM25-201ENST00000316881 WIPF1O43516 503 aa9.08□□□□□ -0.96
TRIM25-201ENST00000316881 A0A1W2PNM2 257 aa9.08□□□□□ -0.96
TRIM25-201ENST00000316881 MIR22HGQ0VDD5 57 aa9.08□□□□□ -0.96
TRIM25-201ENST00000316881 H7BZZ5 65 aa9.08□□□□□ -0.96
TRIM25-201ENST00000316881 LINC01554Q52M75 96 aa9.08□□□□□ -0.96
TRIM25-201ENST00000316881 A8MUN3 132 aa9.07□□□□□ -0.96
TRIM25-201ENST00000316881 IGLV5-48A0A075B6I7 105 aa9.05□□□□□ -0.96
TRIM25-201ENST00000316881 CFAP54Q96N23 3096 aa9.05□□□□□ -0.96
TRIM25-201ENST00000316881 PRR26Q8N8Z3 221 aa9.04□□□□□ -0.96
TRIM25-201ENST00000316881 LAMA2P24043 3122 aaKnown RBP9.04□□□□□ -0.96
TRIM25-201ENST00000316881 FLNAP21333 2647 aaKnown RBP9.04□□□□□ -0.96
TRIM25-201ENST00000316881 Q8N1X5 172 aa9.03□□□□□ -0.96
TRIM25-201ENST00000316881 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.03□□□□□ -0.96
TRIM25-201ENST00000316881 FAM229BQ4G0N7 80 aa9.02□□□□□ -0.96
TRIM25-201ENST00000316881 M0R2T5 61 aa9.02□□□□□ -0.97
TRIM25-201ENST00000316881 ITPR3Q14573 2671 aa9□□□□□ -0.97
TRIM25-201ENST00000316881 UNC80Q8N2C7 3258 aa8.96□□□□□ -0.97
TRIM25-201ENST00000316881 PLAC8Q9NZF1 115 aa8.96□□□□□ -0.98
TRIM25-201ENST00000316881 A0A0D9SG42 100 aa8.96□□□□□ -0.98
TRIM25-201ENST00000316881 SPANXA2-OT1Q8N9U9 137 aa8.95□□□□□ -0.98
TRIM25-201ENST00000316881 CDC42SE1Q9NRR8 79 aa8.92□□□□□ -0.98
TRIM25-201ENST00000316881 STAB1Q9NY15 2570 aa8.92□□□□□ -0.98
TRIM25-201ENST00000316881 MGAQ8IWI9 3026 aa8.89□□□□□ -0.99
TRIM25-201ENST00000316881 CAMK2N1Q7Z7J9 78 aa8.88□□□□□ -0.99
TRIM25-201ENST00000316881 CFAP46Q8IYW2 2715 aa8.87□□□□□ -0.99
TRIM25-201ENST00000316881 PRUNE2Q8WUY3 3088 aa8.87□□□□□ -0.99
TRIM25-201ENST00000316881 LCE6AA0A183 80 aa8.86□□□□□ -0.99
TRIM25-201ENST00000316881 OCR1Q9BZK8 76 aa8.86□□□□□ -0.99
TRIM25-201ENST00000316881 CDH23Q9H251 3354 aa8.86□□□□□ -0.99
TRIM25-201ENST00000316881 Q8NDZ9 215 aa8.85□□□□□ -0.99
TRIM25-201ENST00000316881 TRIOO75962 3097 aa8.84□□□□□ -0.99
TRIM25-201ENST00000316881 SEC61BP60468 96 aaKnown RBP8.83□□□□□ -1
TRIM25-201ENST00000316881 Q5VSD8 79 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms