RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 CSNK1G2-AS1Q8NCQ2 148 aa9.01□□□□□ -0.97
CLCN6-201ENST00000312413 CHD8Q9HCK8 2581 aa9.01□□□□□ -0.97
CLCN6-201ENST00000312413 COL4A2P08572 1712 aa9□□□□□ -0.97
CLCN6-201ENST00000312413 GOLGB1Q14789 3259 aaKnown RBP9□□□□□ -0.97
CLCN6-201ENST00000312413 C15orf56Q8N910 161 aa8.99□□□□□ -0.97
CLCN6-201ENST00000312413 SPANXA2-OT1Q8N9U9 137 aa8.99□□□□□ -0.97
CLCN6-201ENST00000312413 SPTBN4Q9H254 2564 aa8.99□□□□□ -0.97
CLCN6-201ENST00000312413 A0A0G2JQZ4 141 aa8.97□□□□□ -0.97
CLCN6-201ENST00000312413 A0A1W2PNN7 141 aa8.97□□□□□ -0.97
CLCN6-201ENST00000312413 POLQO75417 2590 aa8.97□□□□□ -0.97
CLCN6-201ENST00000312413 CDC42SE1Q9NRR8 79 aa8.96□□□□□ -0.97
CLCN6-201ENST00000312413 KRTAP24-1Q3LI83 254 aa8.96□□□□□ -0.98
CLCN6-201ENST00000312413 PLA2G2DQ9UNK4 145 aa8.95□□□□□ -0.98
CLCN6-201ENST00000312413 ZNF861PO60384 105 aa8.94□□□□□ -0.98
CLCN6-201ENST00000312413 OBSCN-AS1Q96MR7 158 aa8.94□□□□□ -0.98
CLCN6-201ENST00000312413 A0A1W2PNM2 257 aa8.94□□□□□ -0.98
CLCN6-201ENST00000312413 TLX1NBP0CAT3 122 aa8.94□□□□□ -0.98
CLCN6-201ENST00000312413 COX6B2Q6YFQ2 88 aa8.92□□□□□ -0.98
CLCN6-201ENST00000312413 ANKRD17O75179 2603 aaKnown RBP8.91□□□□□ -0.98
CLCN6-201ENST00000312413 FAM104AQ969W3 186 aa8.91□□□□□ -0.98
CLCN6-201ENST00000312413 LINC01554Q52M75 96 aa8.9□□□□□ -0.98
CLCN6-201ENST00000312413 LUZP6Q538Z0 58 aa8.9□□□□□ -0.98
CLCN6-201ENST00000312413 A0A0D9SG42 100 aa8.89□□□□□ -0.99
CLCN6-201ENST00000312413 LINC00304Q8N9R0 145 aa8.89□□□□□ -0.99
CLCN6-201ENST00000312413 LINC00612Q8N6U2 182 aa8.89□□□□□ -0.99
CLCN6-201ENST00000312413 GIG44P09565 113 aaPredicted RBP8.88□□□□□ -0.99
CLCN6-201ENST00000312413 CENPFP49454 3210 aa8.88□□□□□ -0.99
CLCN6-201ENST00000312413 WIPF1O43516 503 aa8.88□□□□□ -0.99
CLCN6-201ENST00000312413 Q1T7F1 81 aa8.87□□□□□ -0.99
CLCN6-201ENST00000312413 OCR1Q9BZK8 76 aa8.86□□□□□ -0.99
CLCN6-201ENST00000312413 C9orf163Q8N9P6 203 aa8.86□□□□□ -0.99
CLCN6-201ENST00000312413 IGLV5-48A0A075B6I7 105 aa8.86□□□□□ -0.99
CLCN6-201ENST00000312413 C9orf92A6NGG3 77 aa8.85□□□□□ -0.99
CLCN6-201ENST00000312413 C19orf73Q9NVV2 129 aa8.84□□□□□ -0.99
CLCN6-201ENST00000312413 FASNP49327 2511 aaKnown RBP8.84□□□□□ -0.99
CLCN6-201ENST00000312413 ANAPC11Q9NYG5 84 aa8.83□□□□□ -1
CLCN6-201ENST00000312413 SPRR4Q96PI1 79 aa8.82□□□□□ -1
CLCN6-201ENST00000312413 PRR26Q8N8Z3 221 aa8.81□□□□□ -1
CLCN6-201ENST00000312413 WWC2-AS2Q96NR7 200 aa8.8□□□□□ -1
CLCN6-201ENST00000312413 Q8N1X5 172 aa8.8□□□□□ -1
CLCN6-201ENST00000312413 A0A087WTM6 91 aa8.79□□□□□ -1
CLCN6-201ENST00000312413 IGLV5-37A0A075B6J1 123 aa8.79□□□□□ -1
CLCN6-201ENST00000312413 IGLV7-43P04211 117 aa8.79□□□□□ -1
CLCN6-201ENST00000312413 J3QL48 77 aa8.78□□□□□ -1
CLCN6-201ENST00000312413 PSORS1C2Q9UIG4 136 aa8.77□□□□□ -1
CLCN6-201ENST00000312413 KRTAP10-11P60412 298 aa8.77□□□□□ -1.01
CLCN6-201ENST00000312413 CNBPP62633 177 aaKnown RBP8.75□□□□□ -1.01
CLCN6-201ENST00000312413 K7EIL1 84 aa8.75□□□□□ -1.01
CLCN6-201ENST00000312413 USP24Q9UPU5 2620 aa8.75□□□□□ -1.01
CLCN6-201ENST00000312413 RBM12B-AS1Q9P1G2 102 aa8.74□□□□□ -1.01
CLCN6-201ENST00000312413 IGLV7-46A0A075B6I9 117 aa8.74□□□□□ -1.01
CLCN6-201ENST00000312413 PCSK5Q92824 1860 aa8.74□□□□□ -1.01
CLCN6-201ENST00000312413 Q75L30 129 aa8.74□□□□□ -1.01
CLCN6-201ENST00000312413 CASC10Q5T4H9 136 aa8.73□□□□□ -1.01
CLCN6-201ENST00000312413 ZNF575Q86XF7 245 aa8.72□□□□□ -1.01
CLCN6-201ENST00000312413 Q5XG85 94 aa8.69□□□□□ -1.02
CLCN6-201ENST00000312413 H3BS24 57 aa8.69□□□□□ -1.02
CLCN6-201ENST00000312413 A0A096LNT2 108 aa8.69□□□□□ -1.02
CLCN6-201ENST00000312413 A0A1B0GU33 70 aa8.66□□□□□ -1.02
CLCN6-201ENST00000312413 KRTAP10-3P60369 221 aa8.66□□□□□ -1.02
CLCN6-201ENST00000312413 CR1P17927 2039 aa8.66□□□□□ -1.02
CLCN6-201ENST00000312413 Q8N9P0 234 aaPredicted RBP8.66□□□□□ -1.02
CLCN6-201ENST00000312413 LINC01558Q9Y6Z2 57 aa8.65□□□□□ -1.02
CLCN6-201ENST00000312413 SMR3BP02814 79 aaPredicted RBP8.65□□□□□ -1.02
CLCN6-201ENST00000312413 MGAM2Q2M2H8 2515 aa8.65□□□□□ -1.02
CLCN6-201ENST00000312413 HRES1P13985 223 aa8.65□□□□□ -1.03
CLCN6-201ENST00000312413 FAM229BQ4G0N7 80 aa8.64□□□□□ -1.03
CLCN6-201ENST00000312413 FP248Q71RG6 208 aaPredicted RBP8.64□□□□□ -1.03
CLCN6-201ENST00000312413 LINC00483Q53H64 154 aa8.63□□□□□ -1.03
CLCN6-201ENST00000312413 CYSTM1Q9H1C7 97 aa8.6□□□□□ -1.03
CLCN6-201ENST00000312413 CAMK2N1Q7Z7J9 78 aa8.6□□□□□ -1.03
CLCN6-201ENST00000312413 A0A0A0MQY5 61 aa8.59□□□□□ -1.03
CLCN6-201ENST00000312413 DNAH12Q6ZR08 3092 aa8.58□□□□□ -1.04
CLCN6-201ENST00000312413 PRAC1Q96KF2 57 aa8.58□□□□□ -1.04
CLCN6-201ENST00000312413 MMP24-AS1A0A0U1RRL7 71 aa8.57□□□□□ -1.04
CLCN6-201ENST00000312413 Q5VV11 94 aa8.55□□□□□ -1.04
CLCN6-201ENST00000312413 EPG5Q9HCE0 2579 aa8.55□□□□□ -1.04
CLCN6-201ENST00000312413 PRRC2CQ9Y520 2896 aaKnown RBP8.52□□□□□ -1.05
CLCN6-201ENST00000312413 BPTFQ12830 3046 aa8.51□□□□□ -1.05
CLCN6-201ENST00000312413 DMAC1Q96GE9 116 aa8.5□□□□□ -1.05
CLCN6-201ENST00000312413 CSAG1Q6PB30 78 aa8.48□□□□□ -1.05
CLCN6-201ENST00000312413 UTRNP46939 3433 aa8.48□□□□□ -1.05
CLCN6-201ENST00000312413 SPINK7P58062 85 aa8.48□□□□□ -1.05
CLCN6-201ENST00000312413 FLNBO75369 2602 aaKnown RBP8.47□□□□□ -1.05
CLCN6-201ENST00000312413 ATRQ13535 2644 aa8.47□□□□□ -1.05
CLCN6-201ENST00000312413 Q6ZSA8 131 aa8.47□□□□□ -1.05
CLCN6-201ENST00000312413 SPRR1AP35321 89 aa8.47□□□□□ -1.05
CLCN6-201ENST00000312413 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.47□□□□□ -1.05
CLCN6-201ENST00000312413 Q8NDZ9 215 aa8.46□□□□□ -1.05
CLCN6-201ENST00000312413 ZCCHC13Q8WW36 166 aaKnown RBP8.45□□□□□ -1.06
CLCN6-201ENST00000312413 PCNTO95613 3336 aa8.44□□□□□ -1.06
CLCN6-201ENST00000312413 CEP350Q5VT06 3117 aa8.44□□□□□ -1.06
CLCN6-201ENST00000312413 LINC00472Q9H8W2 130 aa8.43□□□□□ -1.06
CLCN6-201ENST00000312413 Q5W150 140 aa8.42□□□□□ -1.06
CLCN6-201ENST00000312413 HECTD1Q9ULT8 2610 aa8.42□□□□□ -1.06
CLCN6-201ENST00000312413 TNP2Q05952 138 aa8.42□□□□□ -1.06
CLCN6-201ENST00000312413 OXTP01178 125 aa8.41□□□□□ -1.06
CLCN6-201ENST00000312413 KRTAP1-3Q8IUG1 177 aa8.41□□□□□ -1.06
CLCN6-201ENST00000312413 MAST4O15021 2626 aa8.41□□□□□ -1.06
CLCN6-201ENST00000312413 SPRR1BP22528 89 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms