RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 GVQW2A0A096LPI5 108 aaPredicted RBP12.62□□□□□ -0.39
HERPUD2-201ENST00000311350 NDUFC1O43677 76 aa12.62□□□□□ -0.39
HERPUD2-201ENST00000311350 DAD1P61803 113 aa12.62□□□□□ -0.39
HERPUD2-201ENST00000311350 LELP1Q5T871 98 aa12.62□□□□□ -0.39
HERPUD2-201ENST00000311350 SPAG11BQ08648 103 aa12.62□□□□□ -0.39
HERPUD2-201ENST00000311350 PRR34Q9NV39 138 aa12.6□□□□□ -0.39
HERPUD2-201ENST00000311350 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.6□□□□□ -0.39
HERPUD2-201ENST00000311350 PDE6GP18545 87 aa12.59□□□□□ -0.39
HERPUD2-201ENST00000311350 PRKDCP78527 4128 aaKnown RBP12.59□□□□□ -0.39
HERPUD2-201ENST00000311350 PRB2P02812 416 aaPredicted RBP12.59□□□□□ -0.39
HERPUD2-201ENST00000311350 XAGE1AQ9HD64 81 aa12.57□□□□□ -0.4
HERPUD2-201ENST00000311350 DEFB135Q30KP9 77 aa12.57□□□□□ -0.4
HERPUD2-201ENST00000311350 Q8NAQ8 132 aa12.56□□□□□ -0.4
HERPUD2-201ENST00000311350 ATP5EP56381 51 aaPredicted RBP12.55□□□□□ -0.4
HERPUD2-201ENST00000311350 IGKV4-1P06312 121 aa12.54□□□□□ -0.4
HERPUD2-201ENST00000311350 SPART-AS1P0CW21 52 aa12.54□□□□□ -0.4
HERPUD2-201ENST00000311350 DIRC1Q969H9 104 aa12.54□□□□□ -0.4
HERPUD2-201ENST00000311350 HIGD2AQ9BW72 106 aa12.53□□□□□ -0.4
HERPUD2-201ENST00000311350 TGP01266 2768 aa12.53□□□□□ -0.4
HERPUD2-201ENST00000311350 C1orf195Q5TG92 126 aa12.53□□□□□ -0.4
HERPUD2-201ENST00000311350 PRYO14603 147 aa12.52□□□□□ -0.4
HERPUD2-201ENST00000311350 CELA1Q9UNI1 258 aa12.52□□□□□ -0.4
HERPUD2-201ENST00000311350 OCR1Q9BZK8 76 aa12.52□□□□□ -0.41
HERPUD2-201ENST00000311350 DEFB4AO15263 64 aa12.51□□□□□ -0.41
HERPUD2-201ENST00000311350 ZNF73O43830 326 aaPredicted RBP12.51□□□□□ -0.41
HERPUD2-201ENST00000311350 Q6ZTC4 211 aa12.51□□□□□ -0.41
HERPUD2-201ENST00000311350 F8WDY8 70 aa12.51□□□□□ -0.41
HERPUD2-201ENST00000311350 COX7BP24311 80 aa12.51□□□□□ -0.41
HERPUD2-201ENST00000311350 EGFEM1PQ0D2K5 195 aa12.51□□□□□ -0.41
HERPUD2-201ENST00000311350 DNAH3Q8TD57 4116 aa12.51□□□□□ -0.41
HERPUD2-201ENST00000311350 KRTAP10-11P60412 298 aa12.5□□□□□ -0.41
HERPUD2-201ENST00000311350 FUSP35637 526 aaKnown RBP eCLIP12.5□□□□□ -0.41
HERPUD2-201ENST00000311350 LRCOL1A6NCL2 159 aa12.48□□□□□ -0.41
HERPUD2-201ENST00000311350 ESRGQ1W209 222 aa12.48□□□□□ -0.41
HERPUD2-201ENST00000311350 KLK12Q9UKR0 248 aa12.48□□□□□ -0.41
HERPUD2-201ENST00000311350 ERC2-IT1O76042 136 aa12.48□□□□□ -0.41
HERPUD2-201ENST00000311350 C6orf48Q9UBA6 75 aa12.48□□□□□ -0.41
HERPUD2-201ENST00000311350 C3orf84H3BNL1 204 aa12.47□□□□□ -0.41
HERPUD2-201ENST00000311350 ELOF1P60002 83 aaKnown RBP12.47□□□□□ -0.41
HERPUD2-201ENST00000311350 K7EIL1 84 aa12.46□□□□□ -0.41
HERPUD2-201ENST00000311350 V9GYY9 64 aa12.44□□□□□ -0.42
HERPUD2-201ENST00000311350 FAM30AQ9NZY2 134 aa12.43□□□□□ -0.42
HERPUD2-201ENST00000311350 H3BNG1 76 aa12.42□□□□□ -0.42
HERPUD2-201ENST00000311350 HTN3P15516 51 aa12.41□□□□□ -0.42
HERPUD2-201ENST00000311350 VPREB1P12018 145 aa12.4□□□□□ -0.42
HERPUD2-201ENST00000311350 SEC61GP60059 68 aa12.4□□□□□ -0.42
HERPUD2-201ENST00000311350 M0R378 163 aa12.39□□□□□ -0.43
HERPUD2-201ENST00000311350 KRTAP26-1Q6PEX3 210 aa12.38□□□□□ -0.43
HERPUD2-201ENST00000311350 SMIM29Q86T20 159 aa12.38□□□□□ -0.43
HERPUD2-201ENST00000311350 HIGD2BQ4VC39 106 aa12.36□□□□□ -0.43
HERPUD2-201ENST00000311350 LINC00528Q8N1L1 170 aa12.36□□□□□ -0.43
HERPUD2-201ENST00000311350 DEFB105AQ8NG35 78 aa12.36□□□□□ -0.43
HERPUD2-201ENST00000311350 CAMK2N2Q96S95 79 aa12.36□□□□□ -0.43
HERPUD2-201ENST00000311350 hDV103S1A0JD37 113 aa12.34□□□□□ -0.43
HERPUD2-201ENST00000311350 B9D2Q9BPU9 175 aa12.33□□□□□ -0.44
HERPUD2-201ENST00000311350 Q6ZRP5 223 aa12.33□□□□□ -0.44
HERPUD2-201ENST00000311350 C1orf64Q8NEQ6 169 aa12.31□□□□□ -0.44
HERPUD2-201ENST00000311350 Q6ZRU5 148 aa12.3□□□□□ -0.44
HERPUD2-201ENST00000311350 C15orf56Q8N910 161 aa12.3□□□□□ -0.44
HERPUD2-201ENST00000311350 WFDC10BQ8IUB3 73 aa12.3□□□□□ -0.44
HERPUD2-201ENST00000311350 PRR4Q16378 134 aa12.29□□□□□ -0.44
HERPUD2-201ENST00000311350 PSPHP1O15172 72 aa12.28□□□□□ -0.44
HERPUD2-201ENST00000311350 COL7A1Q02388 2944 aa12.28□□□□□ -0.44
HERPUD2-201ENST00000311350 DNAH9Q9NYC9 4486 aa12.27□□□□□ -0.44
HERPUD2-201ENST00000311350 Q8N377 158 aa12.27□□□□□ -0.45
HERPUD2-201ENST00000311350 A0A1W2PNM2 257 aa12.23□□□□□ -0.45
HERPUD2-201ENST00000311350 PRR15Q8IV56 129 aa12.23□□□□□ -0.45
HERPUD2-201ENST00000311350 LINC01556Q5JQF7 62 aa12.22□□□□□ -0.45
HERPUD2-201ENST00000311350 KCNQ1DNQ9H478 68 aa12.22□□□□□ -0.45
HERPUD2-201ENST00000311350 LCE6AA0A183 80 aa12.22□□□□□ -0.45
HERPUD2-201ENST00000311350 Q1T7F1 81 aa12.22□□□□□ -0.45
HERPUD2-201ENST00000311350 ZCCHC13Q8WW36 166 aaKnown RBP12.2□□□□□ -0.46
HERPUD2-201ENST00000311350 ST20-AS1Q8NBB2 130 aa12.2□□□□□ -0.46
HERPUD2-201ENST00000311350 A0A1B0GW54 56 aa12.19□□□□□ -0.46
HERPUD2-201ENST00000311350 PLA2G2DQ9UNK4 145 aa12.19□□□□□ -0.46
HERPUD2-201ENST00000311350 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.19□□□□□ -0.46
HERPUD2-201ENST00000311350 SYCNQ0VAF6 134 aa12.19□□□□□ -0.46
HERPUD2-201ENST00000311350 PMAIP1Q13794 54 aa12.19□□□□□ -0.46
HERPUD2-201ENST00000311350 IGLV5-48A0A075B6I7 105 aa12.18□□□□□ -0.46
HERPUD2-201ENST00000311350 TRAV22A0A0B4J277 110 aa12.18□□□□□ -0.46
HERPUD2-201ENST00000311350 A8MU10 97 aa12.18□□□□□ -0.46
HERPUD2-201ENST00000311350 K7EQZ3 153 aa12.17□□□□□ -0.46
HERPUD2-201ENST00000311350 TLX1NBP0CAT3 122 aa12.17□□□□□ -0.46
HERPUD2-201ENST00000311350 DSCR10P59022 87 aa12.17□□□□□ -0.46
HERPUD2-201ENST00000311350 WWC2-AS2Q96NR7 200 aa12.16□□□□□ -0.46
HERPUD2-201ENST00000311350 NKAPP1Q8N9T2 125 aa12.15□□□□□ -0.46
HERPUD2-201ENST00000311350 ETDCA0A1B0GVM5 59 aa12.15□□□□□ -0.46
HERPUD2-201ENST00000311350 SERTAD4-AS1Q5TG53 156 aa12.15□□□□□ -0.46
HERPUD2-201ENST00000311350 IGLV5-37A0A075B6J1 123 aa12.13□□□□□ -0.47
HERPUD2-201ENST00000311350 IGKV2D-24A0A075B6R9 120 aa12.13□□□□□ -0.47
HERPUD2-201ENST00000311350 C1orf137Q5JT78 98 aa12.13□□□□□ -0.47
HERPUD2-201ENST00000311350 DHRS4-AS1Q9P1J3 65 aa12.13□□□□□ -0.47
HERPUD2-201ENST00000311350 RETNQ9HD89 108 aa12.13□□□□□ -0.47
HERPUD2-201ENST00000311350 C7orf33Q8WU49 177 aa12.12□□□□□ -0.47
HERPUD2-201ENST00000311350 A8MUN3 132 aa12.12□□□□□ -0.47
HERPUD2-201ENST00000311350 HUWE1Q7Z6Z7 4374 aaKnown RBP12.11□□□□□ -0.47
HERPUD2-201ENST00000311350 RPL37AP8A6NKH3 93 aa12.11□□□□□ -0.47
HERPUD2-201ENST00000311350 DNAH10OSP0CZ25 163 aa12.11□□□□□ -0.47
HERPUD2-201ENST00000311350 DEFB116Q30KQ4 102 aa12.11□□□□□ -0.47
HERPUD2-201ENST00000311350 Q9BRP9 147 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 542.4 ms