RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 LINC01547P58512 204 aaPredicted RBP6.97□□□□□ -1.29
APOBEC3F-201ENST00000308521 LINC00575Q6W349 94 aa6.97□□□□□ -1.29
APOBEC3F-201ENST00000308521 DNHD1Q96M86 4753 aa6.97□□□□□ -1.29
APOBEC3F-201ENST00000308521 Q6ZTC4 211 aa6.97□□□□□ -1.29
APOBEC3F-201ENST00000308521 Q8N3U1 123 aa6.97□□□□□ -1.29
APOBEC3F-201ENST00000308521 MUC7Q8TAX7 377 aa6.97□□□□□ -1.29
APOBEC3F-201ENST00000308521 STAB2Q8WWQ8 2551 aa6.97□□□□□ -1.29
APOBEC3F-201ENST00000308521 LCE2CQ5TA81 110 aa6.96□□□□□ -1.3
APOBEC3F-201ENST00000308521 ZNF561-AS1K7EIQ3 104 aa6.95□□□□□ -1.3
APOBEC3F-201ENST00000308521 C6orf99Q4VX62 202 aa6.95□□□□□ -1.3
APOBEC3F-201ENST00000308521 Q6ZQT0 140 aa6.95□□□□□ -1.3
APOBEC3F-201ENST00000308521 TMEM254Q8TBM7 123 aa6.95□□□□□ -1.3
APOBEC3F-201ENST00000308521 Q1T7F1 81 aa6.95□□□□□ -1.3
APOBEC3F-201ENST00000308521 CLPSL2Q6UWE3 100 aa6.95□□□□□ -1.3
APOBEC3F-201ENST00000308521 C6orf223Q8N319 242 aa6.95□□□□□ -1.3
APOBEC3F-201ENST00000308521 TRAV10A0A0B4J240 114 aa6.94□□□□□ -1.3
APOBEC3F-201ENST00000308521 CHCHD10Q8WYQ3 142 aaPredicted RBP6.94□□□□□ -1.3
APOBEC3F-201ENST00000308521 FAM229AH3BQW9 127 aa6.94□□□□□ -1.3
APOBEC3F-201ENST00000308521 LINC00269Q8N2A0 174 aa6.93□□□□□ -1.3
APOBEC3F-201ENST00000308521 MPLKIPQ8TAP9 179 aa6.93□□□□□ -1.3
APOBEC3F-201ENST00000308521 FUSP35637 526 aaKnown RBP eCLIP6.93□□□□□ -1.3
APOBEC3F-201ENST00000308521 NREPQ16612 68 aa6.93□□□□□ -1.3
APOBEC3F-201ENST00000308521 Q6ZVQ6 151 aa6.93□□□□□ -1.3
APOBEC3F-201ENST00000308521 Q8NDZ9 215 aa6.93□□□□□ -1.3
APOBEC3F-201ENST00000308521 PRYO14603 147 aa6.92□□□□□ -1.3
APOBEC3F-201ENST00000308521 FAM229BQ4G0N7 80 aa6.92□□□□□ -1.3
APOBEC3F-201ENST00000308521 C11orf45Q8TAV5 145 aa6.92□□□□□ -1.3
APOBEC3F-201ENST00000308521 REG3AQ06141 175 aa6.91□□□□□ -1.3
APOBEC3F-201ENST00000308521 C9orf116Q5BN46 136 aaPredicted RBP6.91□□□□□ -1.3
APOBEC3F-201ENST00000308521 DNAH9Q9NYC9 4486 aa6.91□□□□□ -1.3
APOBEC3F-201ENST00000308521 IGLV6-57P01721 117 aa6.91□□□□□ -1.3
APOBEC3F-201ENST00000308521 KPRPQ5T749 579 aaPredicted RBP6.9□□□□□ -1.3
APOBEC3F-201ENST00000308521 LYSTQ99698 3801 aa6.9□□□□□ -1.3
APOBEC3F-201ENST00000308521 TM2D3Q9BRN9 247 aa6.9□□□□□ -1.3
APOBEC3F-201ENST00000308521 IGLV10-54A0A075B6I4 117 aa6.89□□□□□ -1.31
APOBEC3F-201ENST00000308521 ANGP03950 147 aaKnown RBP6.89□□□□□ -1.31
APOBEC3F-201ENST00000308521 HAMPP81172 84 aa6.89□□□□□ -1.31
APOBEC3F-201ENST00000308521 TENM2Q9NT68 2774 aa6.89□□□□□ -1.31
APOBEC3F-201ENST00000308521 DEFB131BA0A096LNP1 70 aa6.89□□□□□ -1.31
APOBEC3F-201ENST00000308521 MRPL55Q7Z7F7 128 aaKnown RBP6.88□□□□□ -1.31
APOBEC3F-201ENST00000308521 PRKDCP78527 4128 aaKnown RBP6.88□□□□□ -1.31
APOBEC3F-201ENST00000308521 BPY2O14599 106 aa6.87□□□□□ -1.31
APOBEC3F-201ENST00000308521 SPAG11BQ08648 103 aa6.87□□□□□ -1.31
APOBEC3F-201ENST00000308521 UNQ6190/PRO20217Q6UXQ8 127 aa6.87□□□□□ -1.31
APOBEC3F-201ENST00000308521 GVQW2A0A096LPI5 108 aaPredicted RBP6.87□□□□□ -1.31
APOBEC3F-201ENST00000308521 hDV103S1A0JD37 113 aa6.87□□□□□ -1.31
APOBEC3F-201ENST00000308521 M0R2N4 97 aa6.87□□□□□ -1.31
APOBEC3F-201ENST00000308521 C10orf25Q5T742 122 aa6.87□□□□□ -1.31
APOBEC3F-201ENST00000308521 Q6ZQY7 126 aa6.86□□□□□ -1.31
APOBEC3F-201ENST00000308521 MEGF8Q7Z7M0 2845 aa6.86□□□□□ -1.31
APOBEC3F-201ENST00000308521 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.85□□□□□ -1.31
APOBEC3F-201ENST00000308521 WFDC10BQ8IUB3 73 aa6.85□□□□□ -1.31
APOBEC3F-201ENST00000308521 LELP1Q5T871 98 aa6.85□□□□□ -1.31
APOBEC3F-201ENST00000308521 KLK12Q9UKR0 248 aa6.85□□□□□ -1.31
APOBEC3F-201ENST00000308521 DIRC1Q969H9 104 aa6.84□□□□□ -1.31
APOBEC3F-201ENST00000308521 OCR1Q9BZK8 76 aa6.84□□□□□ -1.31
APOBEC3F-201ENST00000308521 CSMD3Q7Z407 3707 aa6.84□□□□□ -1.31
APOBEC3F-201ENST00000308521 PRR34Q9NV39 138 aa6.83□□□□□ -1.32
APOBEC3F-201ENST00000308521 COX7BP24311 80 aa6.82□□□□□ -1.32
APOBEC3F-201ENST00000308521 UBE2BP63146 152 aa6.82□□□□□ -1.32
APOBEC3F-201ENST00000308521 KTN1-AS1Q86SY8 53 aa6.82□□□□□ -1.32
APOBEC3F-201ENST00000308521 ZNF73O43830 326 aaPredicted RBP6.81□□□□□ -1.32
APOBEC3F-201ENST00000308521 ELOF1P60002 83 aaKnown RBP6.81□□□□□ -1.32
APOBEC3F-201ENST00000308521 Q6ZRP5 223 aa6.81□□□□□ -1.32
APOBEC3F-201ENST00000308521 LCE6AA0A183 80 aa6.81□□□□□ -1.32
APOBEC3F-201ENST00000308521 C6orf48Q9UBA6 75 aa6.81□□□□□ -1.32
APOBEC3F-201ENST00000308521 H3BNG1 76 aa6.8□□□□□ -1.32
APOBEC3F-201ENST00000308521 NDUFS5O43920 106 aa6.8□□□□□ -1.32
APOBEC3F-201ENST00000308521 CYP4F30PQ9H0H9 118 aa6.79□□□□□ -1.32
APOBEC3F-201ENST00000308521 DNAH7Q8WXX0 4024 aa6.79□□□□□ -1.32
APOBEC3F-201ENST00000308521 TGP01266 2768 aa6.78□□□□□ -1.32
APOBEC3F-201ENST00000308521 VPREB1P12018 145 aa6.77□□□□□ -1.33
APOBEC3F-201ENST00000308521 LCE2AQ5TA79 106 aaPredicted RBP6.77□□□□□ -1.33
APOBEC3F-201ENST00000308521 M0R378 163 aa6.77□□□□□ -1.33
APOBEC3F-201ENST00000308521 B9D2Q9BPU9 175 aa6.77□□□□□ -1.33
APOBEC3F-201ENST00000308521 XAGE1AQ9HD64 81 aa6.77□□□□□ -1.33
APOBEC3F-201ENST00000308521 TRAV22A0A0B4J277 110 aa6.76□□□□□ -1.33
APOBEC3F-201ENST00000308521 LINC00588Q9Y4M8 146 aa6.76□□□□□ -1.33
APOBEC3F-201ENST00000308521 IGKV4-1P06312 121 aa6.76□□□□□ -1.33
APOBEC3F-201ENST00000308521 C1orf64Q8NEQ6 169 aa6.75□□□□□ -1.33
APOBEC3F-201ENST00000308521 RBM12B-AS1Q9P1G2 102 aa6.75□□□□□ -1.33
APOBEC3F-201ENST00000308521 PLECQ15149 4684 aaKnown RBP6.75□□□□□ -1.33
APOBEC3F-201ENST00000308521 UBE2AP49459 152 aa6.75□□□□□ -1.33
APOBEC3F-201ENST00000308521 SCXQ7RTU7 201 aa6.74□□□□□ -1.33
APOBEC3F-201ENST00000308521 DNAH10Q8IVF4 4471 aa6.74□□□□□ -1.33
APOBEC3F-201ENST00000308521 HIGD2AQ9BW72 106 aa6.73□□□□□ -1.33
APOBEC3F-201ENST00000308521 SYCNQ0VAF6 134 aa6.73□□□□□ -1.33
APOBEC3F-201ENST00000308521 PHF5AQ7RTV0 110 aaKnown RBP6.73□□□□□ -1.33
APOBEC3F-201ENST00000308521 A0A1B0GW54 56 aa6.73□□□□□ -1.33
APOBEC3F-201ENST00000308521 ZCCHC13Q8WW36 166 aaKnown RBP6.73□□□□□ -1.33
APOBEC3F-201ENST00000308521 CAMK2N2Q96S95 79 aa6.73□□□□□ -1.33
APOBEC3F-201ENST00000308521 IGKV2D-24A0A075B6R9 120 aa6.72□□□□□ -1.33
APOBEC3F-201ENST00000308521 ATP11AUNQ6ZP68 121 aa6.72□□□□□ -1.33
APOBEC3F-201ENST00000308521 FBN3Q75N90 2809 aa6.72□□□□□ -1.33
APOBEC3F-201ENST00000308521 PSCAO43653 123 aa6.72□□□□□ -1.33
APOBEC3F-201ENST00000308521 HIGD2BQ4VC39 106 aa6.72□□□□□ -1.33
APOBEC3F-201ENST00000308521 KRTAP26-1Q6PEX3 210 aa6.72□□□□□ -1.33
APOBEC3F-201ENST00000308521 STARD9Q9P2P6 4700 aa6.71□□□□□ -1.33
APOBEC3F-201ENST00000308521 NDUFB1O75438 58 aa6.71□□□□□ -1.34
APOBEC3F-201ENST00000308521 LINC01556Q5JQF7 62 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms