RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 LRCOL1A6NCL2 159 aa14.43□□□□□ -0.1
PDLIM2-202ENST00000308354 C7orf33Q8WU49 177 aa14.43□□□□□ -0.1
PDLIM2-202ENST00000308354 CNBPP62633 177 aaKnown RBP14.42□□□□□ -0.1
PDLIM2-202ENST00000308354 LINC00643Q86TS7 51 aa14.42□□□□□ -0.1
PDLIM2-202ENST00000308354 FAM19A5Q7Z5A7 132 aaPredicted RBP14.41□□□□□ -0.1
PDLIM2-202ENST00000308354 KMT2AQ03164 3969 aa14.4□□□□□ -0.1
PDLIM2-202ENST00000308354 IGKV2-24A0A0C4DH68 120 aa14.4□□□□□ -0.1
PDLIM2-202ENST00000308354 TRBV7-7A0A0K0K1E9 115 aa14.39□□□□□ -0.11
PDLIM2-202ENST00000308354 RPL37AP8A6NKH3 93 aa14.39□□□□□ -0.11
PDLIM2-202ENST00000308354 CCKP06307 115 aa14.39□□□□□ -0.11
PDLIM2-202ENST00000308354 LINC00846Q9NV44 126 aa14.39□□□□□ -0.11
PDLIM2-202ENST00000308354 A0A096LNI7 61 aa14.39□□□□□ -0.11
PDLIM2-202ENST00000308354 C14orf177Q52M58 125 aa14.39□□□□□ -0.11
PDLIM2-202ENST00000308354 LINC00528Q8N1L1 170 aa14.38□□□□□ -0.11
PDLIM2-202ENST00000308354 PLA2G2DQ9UNK4 145 aa14.38□□□□□ -0.11
PDLIM2-202ENST00000308354 ANAPC13Q9BS18 74 aa14.38□□□□□ -0.11
PDLIM2-202ENST00000308354 LAMTOR3Q9UHA4 124 aa14.38□□□□□ -0.11
PDLIM2-202ENST00000308354 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.37□□□□□ -0.11
PDLIM2-202ENST00000308354 KCNQ1DNQ9H478 68 aa14.37□□□□□ -0.11
PDLIM2-202ENST00000308354 NDUFV3P56181 108 aaKnown RBP14.34□□□□□ -0.11
PDLIM2-202ENST00000308354 RBM3P98179 157 aaKnown RBP14.34□□□□□ -0.11
PDLIM2-202ENST00000308354 C16orf90A8MZG2 172 aa14.33□□□□□ -0.12
PDLIM2-202ENST00000308354 LY6G6CO95867 125 aa14.33□□□□□ -0.12
PDLIM2-202ENST00000308354 IGLV5-37A0A075B6J1 123 aa14.33□□□□□ -0.12
PDLIM2-202ENST00000308354 CHTF8P0CG12 524 aa14.32□□□□□ -0.12
PDLIM2-202ENST00000308354 Q6ZR54 194 aa14.31□□□□□ -0.12
PDLIM2-202ENST00000308354 H3BQ85 93 aa14.31□□□□□ -0.12
PDLIM2-202ENST00000308354 MRPL55Q7Z7F7 128 aaKnown RBP14.31□□□□□ -0.12
PDLIM2-202ENST00000308354 IGLV1-50A0A075B6I6 118 aa14.3□□□□□ -0.12
PDLIM2-202ENST00000308354 WWC2-AS2Q96NR7 200 aa14.3□□□□□ -0.12
PDLIM2-202ENST00000308354 A0A1W2PNN7 141 aa14.3□□□□□ -0.12
PDLIM2-202ENST00000308354 IMUPQ9GZP8 106 aa14.3□□□□□ -0.12
PDLIM2-202ENST00000308354 FUSP35637 526 aaKnown RBP eCLIP14.29□□□□□ -0.12
PDLIM2-202ENST00000308354 Q6ZQT0 140 aa14.29□□□□□ -0.12
PDLIM2-202ENST00000308354 C9orf163Q8N9P6 203 aa14.29□□□□□ -0.12
PDLIM2-202ENST00000308354 DNAH2Q9P225 4427 aa14.28□□□□□ -0.12
PDLIM2-202ENST00000308354 LOC110117498A0A087WWA1 95 aa14.27□□□□□ -0.13
PDLIM2-202ENST00000308354 A0A087WTM6 91 aa14.26□□□□□ -0.13
PDLIM2-202ENST00000308354 DSCR8Q96T75 97 aa14.26□□□□□ -0.13
PDLIM2-202ENST00000308354 GHRHP01286 108 aa14.25□□□□□ -0.13
PDLIM2-202ENST00000308354 IGKV3D-7A0A0C4DH55 119 aa14.24□□□□□ -0.13
PDLIM2-202ENST00000308354 PRYO14603 147 aa14.24□□□□□ -0.13
PDLIM2-202ENST00000308354 Q6JHZ5 121 aa14.23□□□□□ -0.13
PDLIM2-202ENST00000308354 FAM236AA0A1B0GUQ0 79 aa14.23□□□□□ -0.13
PDLIM2-202ENST00000308354 FAM236BA0A1B0GV22 79 aa14.23□□□□□ -0.13
PDLIM2-202ENST00000308354 KRTAP4-16G5E9R7 235 aaPredicted RBP14.23□□□□□ -0.13
PDLIM2-202ENST00000308354 Q6ZRX8 168 aa14.22□□□□□ -0.13
PDLIM2-202ENST00000308354 SPRR1AP35321 89 aa14.21□□□□□ -0.13
PDLIM2-202ENST00000308354 PANO1I0J062 215 aa14.21□□□□□ -0.14
PDLIM2-202ENST00000308354 LINC00476Q8WZB0 136 aa14.21□□□□□ -0.14
PDLIM2-202ENST00000308354 B5MCH6 92 aa14.2□□□□□ -0.14
PDLIM2-202ENST00000308354 C1orf134Q5TEV5 83 aa14.2□□□□□ -0.14
PDLIM2-202ENST00000308354 Q9BRP9 147 aa14.19□□□□□ -0.14
PDLIM2-202ENST00000308354 ETDCA0A1B0GVM5 59 aa14.19□□□□□ -0.14
PDLIM2-202ENST00000308354 TRBV7-4A0A0J9YYF1 115 aa14.18□□□□□ -0.14
PDLIM2-202ENST00000308354 DEFB105AQ8NG35 78 aa14.17□□□□□ -0.14
PDLIM2-202ENST00000308354 PDE6GP18545 87 aa14.17□□□□□ -0.14
PDLIM2-202ENST00000308354 PHF5AQ7RTV0 110 aaKnown RBP14.17□□□□□ -0.14
PDLIM2-202ENST00000308354 DHRS4-AS1Q9P1J3 65 aa14.17□□□□□ -0.14
PDLIM2-202ENST00000308354 REG3GQ6UW15 175 aa14.15□□□□□ -0.14
PDLIM2-202ENST00000308354 UBL5Q9BZL1 73 aa14.15□□□□□ -0.14
PDLIM2-202ENST00000308354 DPH3Q96FX2 82 aa14.15□□□□□ -0.14
PDLIM2-202ENST00000308354 KRTAP11-1Q8IUC1 163 aa14.13□□□□□ -0.15
PDLIM2-202ENST00000308354 Q8N377 158 aa14.13□□□□□ -0.15
PDLIM2-202ENST00000308354 RTL8CO15255 209 aa14.12□□□□□ -0.15
PDLIM2-202ENST00000308354 LINC01547P58512 204 aaPredicted RBP14.12□□□□□ -0.15
PDLIM2-202ENST00000308354 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.12□□□□□ -0.15
PDLIM2-202ENST00000308354 CCDC179H3BU77 68 aa14.11□□□□□ -0.15
PDLIM2-202ENST00000308354 HECTD4Q9Y4D8 3996 aa14.11□□□□□ -0.15
PDLIM2-202ENST00000308354 A0A087WVE0 104 aa14.1□□□□□ -0.15
PDLIM2-202ENST00000308354 UBE2BP63146 152 aa14.09□□□□□ -0.15
PDLIM2-202ENST00000308354 ST20-AS1Q8NBB2 130 aa14.09□□□□□ -0.15
PDLIM2-202ENST00000308354 ERC2-IT1O76042 136 aa14.09□□□□□ -0.15
PDLIM2-202ENST00000308354 ATP5EP2Q5VTU8 51 aa14.09□□□□□ -0.15
PDLIM2-202ENST00000308354 LINC00474Q9P2X8 69 aa14.09□□□□□ -0.15
PDLIM2-202ENST00000308354 PKIGQ9Y2B9 76 aa14.09□□□□□ -0.15
PDLIM2-202ENST00000308354 TNP2Q05952 138 aa14.08□□□□□ -0.16
PDLIM2-202ENST00000308354 C3orf22Q8N5N4 141 aa14.08□□□□□ -0.16
PDLIM2-202ENST00000308354 C3orf84H3BNL1 204 aa14.07□□□□□ -0.16
PDLIM2-202ENST00000308354 PRLHP81277 87 aa14.07□□□□□ -0.16
PDLIM2-202ENST00000308354 HIST1H4AP62805 103 aaKnown RBP14.06□□□□□ -0.16
PDLIM2-202ENST00000308354 Q6ZVQ6 151 aa14.06□□□□□ -0.16
PDLIM2-202ENST00000308354 FAM19A1Q7Z5A9 133 aa14.06□□□□□ -0.16
PDLIM2-202ENST00000308354 SS18L2Q9UHA2 77 aa14.06□□□□□ -0.16
PDLIM2-202ENST00000308354 SPACA4Q8TDM5 124 aa14.05□□□□□ -0.16
PDLIM2-202ENST00000308354 HYDINQ4G0P3 5121 aa14.04□□□□□ -0.16
PDLIM2-202ENST00000308354 IGLV5-52A0A0A0MRZ9 124 aa14.03□□□□□ -0.16
PDLIM2-202ENST00000308354 DNAH17Q9UFH2 4485 aa14.03□□□□□ -0.16
PDLIM2-202ENST00000308354 IGLV5-48A0A075B6I7 105 aa14.02□□□□□ -0.16
PDLIM2-202ENST00000308354 ALMS1Q8TCU4 4167 aa14.01□□□□□ -0.17
PDLIM2-202ENST00000308354 HAMPP81172 84 aa14□□□□□ -0.17
PDLIM2-202ENST00000308354 HIGD2AQ9BW72 106 aa13.99□□□□□ -0.17
PDLIM2-202ENST00000308354 DNAH6Q9C0G6 4158 aa13.99□□□□□ -0.17
PDLIM2-202ENST00000308354 SRRM2Q9UQ35 2752 aaKnown RBP13.97□□□□□ -0.17
PDLIM2-202ENST00000308354 ATOX1O00244 68 aa13.96□□□□□ -0.17
PDLIM2-202ENST00000308354 KRTAP10-2P60368 255 aa13.94□□□□□ -0.18
PDLIM2-202ENST00000308354 FRAS1Q86XX4 4008 aa13.94□□□□□ -0.18
PDLIM2-202ENST00000308354 EPM2AB3EWF7 344 aa13.93□□□□□ -0.18
PDLIM2-202ENST00000308354 CXCL6P80162 114 aa13.91□□□□□ -0.18
PDLIM2-202ENST00000308354 C1orf137Q5JT78 98 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms