RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 CBY1Q9Y3M2 126 aa15.31■□□□□ 0.04
CDKN2A-201ENST00000304494 SPAG11AQ6PDA7 123 aa15.3■□□□□ 0.04
CDKN2A-201ENST00000304494 LINC00308Q8TCZ7 52 aa15.3■□□□□ 0.04
CDKN2A-201ENST00000304494 SPANXCQ9NY87 97 aa15.3■□□□□ 0.04
CDKN2A-201ENST00000304494 PPDPFQ9H3Y8 114 aa15.29■□□□□ 0.04
CDKN2A-201ENST00000304494 JOSD1Q15040 202 aaPredicted RBP15.28■□□□□ 0.04
CDKN2A-201ENST00000304494 LINC00483Q53H64 154 aa15.28■□□□□ 0.04
CDKN2A-201ENST00000304494 Q9BRP9 147 aa15.27■□□□□ 0.04
CDKN2A-201ENST00000304494 ZNF73O43830 326 aaPredicted RBP15.26■□□□□ 0.03
CDKN2A-201ENST00000304494 ERC2-IT1O76042 136 aa15.25■□□□□ 0.03
CDKN2A-201ENST00000304494 AKR1D1P51857 326 aa15.25■□□□□ 0.03
CDKN2A-201ENST00000304494 C4orf48Q5BLP8 95 aa15.25■□□□□ 0.03
CDKN2A-201ENST00000304494 GAGE2AQ6NT46 116 aa15.25■□□□□ 0.03
CDKN2A-201ENST00000304494 RETNLBQ9BQ08 111 aa15.25■□□□□ 0.03
CDKN2A-201ENST00000304494 TTTY13Q9BZ97 58 aa15.25■□□□□ 0.03
CDKN2A-201ENST00000304494 HINT1P49773 126 aaPredicted RBP15.23■□□□□ 0.03
CDKN2A-201ENST00000304494 Q8NBF4 154 aa15.21■□□□□ 0.03
CDKN2A-201ENST00000304494 OR13C6PQ8NH95 151 aa15.21■□□□□ 0.03
CDKN2A-201ENST00000304494 SCGB1D4Q6XE38 83 aa15.2■□□□□ 0.02
CDKN2A-201ENST00000304494 SPANXDQ9BXN6 97 aa15.19■□□□□ 0.02
CDKN2A-201ENST00000304494 LINC00518Q8N0U6 118 aa15.18■□□□□ 0.02
CDKN2A-201ENST00000304494 ANKRD39Q53RE8 183 aa15.17■□□□□ 0.02
CDKN2A-201ENST00000304494 ATOH7Q8N100 152 aa15.17■□□□□ 0.02
CDKN2A-201ENST00000304494 S100A1P23297 94 aa15.16■□□□□ 0.02
CDKN2A-201ENST00000304494 COPS9Q8WXC6 57 aa15.16■□□□□ 0.02
CDKN2A-201ENST00000304494 IGLV9-49A0A0B4J1Y8 123 aa15.15■□□□□ 0.02
CDKN2A-201ENST00000304494 IGLV7-46A0A075B6I9 117 aa15.14■□□□□ 0.01
CDKN2A-201ENST00000304494 C5orf52A6NGY3 159 aa15.14■□□□□ 0.01
CDKN2A-201ENST00000304494 MOBPQ13875 183 aa15.14■□□□□ 0.01
CDKN2A-201ENST00000304494 SPINK1P00995 79 aa15.13■□□□□ 0.01
CDKN2A-201ENST00000304494 SSBP3-AS1Q7Z2R9 100 aa15.13■□□□□ 0.01
CDKN2A-201ENST00000304494 TPRXLQ17RH7 258 aa15.12■□□□□ 0.01
CDKN2A-201ENST00000304494 SNRPEP62304 92 aaKnown RBP15.11■□□□□ 0.01
CDKN2A-201ENST00000304494 Q6ZVH6 145 aa15.11■□□□□ 0.01
CDKN2A-201ENST00000304494 IFITM1P13164 125 aa15.1■□□□□ 0.01
CDKN2A-201ENST00000304494 S100A2P29034 98 aa15.1■□□□□ 0.01
CDKN2A-201ENST00000304494 DHRS4-AS1Q9P1J3 65 aa15.1■□□□□ 0.01
CDKN2A-201ENST00000304494 HIST3H2BBQ8N257 126 aa15.09■□□□□ 0.01
CDKN2A-201ENST00000304494 FP248Q71RG6 208 aaPredicted RBP15.08■□□□□ 0
CDKN2A-201ENST00000304494 PCP2Q8IVA1 136 aa15.07■□□□□ 0
CDKN2A-201ENST00000304494 ST20-AS1Q8NBB2 130 aa15.07■□□□□ 0
CDKN2A-201ENST00000304494 HIST1H2BLQ99880 126 aa15.07■□□□□ 0
CDKN2A-201ENST00000304494 CDIP1Q9H305 208 aa15.07■□□□□ 0
CDKN2A-201ENST00000304494 C6orf99Q4VX62 202 aa15.05■□□□□ -0
CDKN2A-201ENST00000304494 MUC2Q02817 5179 aa15.05■□□□□ -0
CDKN2A-201ENST00000304494 COX7BP24311 80 aa15.04■□□□□ -0
CDKN2A-201ENST00000304494 ELOF1P60002 83 aaKnown RBP15.04■□□□□ -0
CDKN2A-201ENST00000304494 RPS29P62273 56 aaKnown RBP15.04■□□□□ -0
CDKN2A-201ENST00000304494 C9orf153Q5TBE3 101 aa15.04■□□□□ -0
CDKN2A-201ENST00000304494 S100A6P06703 90 aa15.03■□□□□ -0
CDKN2A-201ENST00000304494 MUSTN1Q8IVN3 82 aa15.02■□□□□ -0
CDKN2A-201ENST00000304494 SLC25A34Q6PIV7 304 aa15.01□□□□□ -0.01
CDKN2A-201ENST00000304494 HSBP1L1C9JCN9 74 aa15□□□□□ -0.01
CDKN2A-201ENST00000304494 TRBV7-6A0A0J9YX20 115 aa14.99□□□□□ -0.01
CDKN2A-201ENST00000304494 A6NDN8 102 aa14.99□□□□□ -0.01
CDKN2A-201ENST00000304494 SPRR1BP22528 89 aa14.99□□□□□ -0.01
CDKN2A-201ENST00000304494 A0A1B0GWB2 263 aa14.94□□□□□ -0.02
CDKN2A-201ENST00000304494 SLC25A20O43772 301 aa14.94□□□□□ -0.02
CDKN2A-201ENST00000304494 Q8N377 158 aa14.94□□□□□ -0.02
CDKN2A-201ENST00000304494 KRTAP3-3Q9BYR6 98 aa14.94□□□□□ -0.02
CDKN2A-201ENST00000304494 KRTAP3-2Q9BYR7 98 aa14.94□□□□□ -0.02
CDKN2A-201ENST00000304494 TRAV13-2A0A0B4J235 113 aa14.93□□□□□ -0.02
CDKN2A-201ENST00000304494 LAMTOR3Q9UHA4 124 aa14.93□□□□□ -0.02
CDKN2A-201ENST00000304494 A0A0U1RQV1 116 aa14.91□□□□□ -0.02
CDKN2A-201ENST00000304494 TAL2Q16559 108 aa14.91□□□□□ -0.02
CDKN2A-201ENST00000304494 A4D1N5 150 aa14.88□□□□□ -0.03
CDKN2A-201ENST00000304494 KRTAP13-3Q3SY46 172 aa14.88□□□□□ -0.03
CDKN2A-201ENST00000304494 MUC17Q685J3 4493 aa14.88□□□□□ -0.03
CDKN2A-201ENST00000304494 TEX49A0A1B0GTD5 131 aa14.87□□□□□ -0.03
CDKN2A-201ENST00000304494 DEFB105AQ8NG35 78 aa14.87□□□□□ -0.03
CDKN2A-201ENST00000304494 SCGB1D1O95968 90 aa14.85□□□□□ -0.03
CDKN2A-201ENST00000304494 SMIM11BQ8TCY0 68 aa14.84□□□□□ -0.03
CDKN2A-201ENST00000304494 NHP2Q9NX24 153 aaKnown RBP14.83□□□□□ -0.04
CDKN2A-201ENST00000304494 Q1RN00 199 aa14.82□□□□□ -0.04
CDKN2A-201ENST00000304494 LIMD2Q9BT23 127 aa14.81□□□□□ -0.04
CDKN2A-201ENST00000304494 IGLV5-48A0A075B6I7 105 aa14.79□□□□□ -0.04
CDKN2A-201ENST00000304494 VAMP3Q15836 100 aa14.78□□□□□ -0.04
CDKN2A-201ENST00000304494 PRO1933Q9H354 126 aa14.78□□□□□ -0.04
CDKN2A-201ENST00000304494 HRCT1Q6UXD1 115 aa14.77□□□□□ -0.05
CDKN2A-201ENST00000304494 LINC01547P58512 204 aaPredicted RBP14.76□□□□□ -0.05
CDKN2A-201ENST00000304494 SMIM29Q86T20 159 aa14.75□□□□□ -0.05
CDKN2A-201ENST00000304494 COX8AP10176 69 aa14.74□□□□□ -0.05
CDKN2A-201ENST00000304494 CD164Q04900 197 aa14.74□□□□□ -0.05
CDKN2A-201ENST00000304494 HIST1H4GQ99525 98 aa14.73□□□□□ -0.05
CDKN2A-201ENST00000304494 H7C2G1 150 aa14.7□□□□□ -0.06
CDKN2A-201ENST00000304494 DLEU1O43261 78 aa14.69□□□□□ -0.06
CDKN2A-201ENST00000304494 ASB16-AS1Q495Z4 193 aa14.69□□□□□ -0.06
CDKN2A-201ENST00000304494 LINC00575Q6W349 94 aa14.68□□□□□ -0.06
CDKN2A-201ENST00000304494 SEC61BP60468 96 aaKnown RBP14.66□□□□□ -0.06
CDKN2A-201ENST00000304494 C12orf57Q99622 126 aa14.65□□□□□ -0.06
CDKN2A-201ENST00000304494 hADV29S1A0JD25 119 aa14.64□□□□□ -0.07
CDKN2A-201ENST00000304494 FAT4Q6V0I7 4981 aa14.64□□□□□ -0.07
CDKN2A-201ENST00000304494 F8WEM9 126 aa14.61□□□□□ -0.07
CDKN2A-201ENST00000304494 BVES-AS1Q5T3Y7 98 aa14.61□□□□□ -0.07
CDKN2A-201ENST00000304494 XP32Q5T750 250 aa14.61□□□□□ -0.07
CDKN2A-201ENST00000304494 Q5XG85 94 aa14.61□□□□□ -0.07
CDKN2A-201ENST00000304494 Q6ZQY7 126 aa14.6□□□□□ -0.07
CDKN2A-201ENST00000304494 C14orf144Q96I85 54 aa14.6□□□□□ -0.07
CDKN2A-201ENST00000304494 PAM16Q9Y3D7 125 aa14.6□□□□□ -0.07
CDKN2A-201ENST00000304494 SPATA45Q537H7 98 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 213.8 ms