RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 SPANXDQ9BXN6 97 aa10.97□□□□□ -0.65
TMEM88-201ENST00000301599 SPANXCQ9NY87 97 aa10.97□□□□□ -0.65
TMEM88-201ENST00000301599 NDUFA12Q9UI09 145 aa10.97□□□□□ -0.65
TMEM88-201ENST00000301599 A0A0B4J2C4 111 aa10.96□□□□□ -0.65
TMEM88-201ENST00000301599 TSPEAR-AS2P59090 65 aa10.96□□□□□ -0.65
TMEM88-201ENST00000301599 SFTA2Q6UW10 78 aa10.96□□□□□ -0.65
TMEM88-201ENST00000301599 K7ERJ3 54 aa10.95□□□□□ -0.66
TMEM88-201ENST00000301599 HERV-K104P63124 156 aa10.95□□□□□ -0.66
TMEM88-201ENST00000301599 PRO1854Q9UHT4 67 aa10.95□□□□□ -0.66
TMEM88-201ENST00000301599 RPL13AP40429 203 aaKnown RBP10.94□□□□□ -0.66
TMEM88-201ENST00000301599 LINC00167Q96N53 147 aa10.94□□□□□ -0.66
TMEM88-201ENST00000301599 PPDPFQ9H3Y8 114 aa10.94□□□□□ -0.66
TMEM88-201ENST00000301599 J3QR89 54 aa10.93□□□□□ -0.66
TMEM88-201ENST00000301599 OCIAD2Q56VL3 154 aa10.93□□□□□ -0.66
TMEM88-201ENST00000301599 BCE1O60756 84 aa10.92□□□□□ -0.66
TMEM88-201ENST00000301599 RPL28P46779 137 aaKnown RBP10.92□□□□□ -0.66
TMEM88-201ENST00000301599 IGLV5-39A0A0G2JS06 123 aa10.91□□□□□ -0.66
TMEM88-201ENST00000301599 RPL37AP8A6NKH3 93 aa10.91□□□□□ -0.66
TMEM88-201ENST00000301599 IGLV5-37A0A075B6J1 123 aa10.9□□□□□ -0.66
TMEM88-201ENST00000301599 CFC1BP0CG36 223 aa10.9□□□□□ -0.66
TMEM88-201ENST00000301599 CFC1P0CG37 223 aa10.9□□□□□ -0.66
TMEM88-201ENST00000301599 NKAPP1Q8N9T2 125 aa10.9□□□□□ -0.66
TMEM88-201ENST00000301599 NAA38Q9BRA0 125 aaKnown RBP10.9□□□□□ -0.66
TMEM88-201ENST00000301599 ERG28Q9UKR5 140 aa10.89□□□□□ -0.67
TMEM88-201ENST00000301599 A4D1N5 150 aa10.88□□□□□ -0.67
TMEM88-201ENST00000301599 TSPAN13O95857 204 aa10.88□□□□□ -0.67
TMEM88-201ENST00000301599 PFN2P35080 140 aa10.88□□□□□ -0.67
TMEM88-201ENST00000301599 MUSTN1Q8IVN3 82 aa10.88□□□□□ -0.67
TMEM88-201ENST00000301599 LOC107984156A0A0G2JMH3 177 aa10.86□□□□□ -0.67
TMEM88-201ENST00000301599 COX6CP09669 75 aa10.86□□□□□ -0.67
TMEM88-201ENST00000301599 COX17Q14061 63 aa10.86□□□□□ -0.67
TMEM88-201ENST00000301599 ARL17AQ8IVW1 177 aa10.86□□□□□ -0.67
TMEM88-201ENST00000301599 SCGB1C2P0DMR2 95 aa10.85□□□□□ -0.67
TMEM88-201ENST00000301599 LITAFQ99732 161 aa10.84□□□□□ -0.67
TMEM88-201ENST00000301599 PSMB2P49721 201 aa10.83□□□□□ -0.68
TMEM88-201ENST00000301599 SND1-IT1Q9HBX3 110 aa10.83□□□□□ -0.68
TMEM88-201ENST00000301599 H3BMG7 143 aa10.82□□□□□ -0.68
TMEM88-201ENST00000301599 CRYGAP11844 174 aa10.82□□□□□ -0.68
TMEM88-201ENST00000301599 UBE2AP49459 152 aa10.82□□□□□ -0.68
TMEM88-201ENST00000301599 Q1RN00 199 aa10.82□□□□□ -0.68
TMEM88-201ENST00000301599 ZNF625Q96I27 306 aaPredicted RBP10.82□□□□□ -0.68
TMEM88-201ENST00000301599 RNF213Q63HN8 5207 aa10.8□□□□□ -0.68
TMEM88-201ENST00000301599 IGKV2-28A0A075B6P5 120 aa10.8□□□□□ -0.68
TMEM88-201ENST00000301599 IGKV2D-28P01615 120 aa10.8□□□□□ -0.68
TMEM88-201ENST00000301599 VPREB1P12018 145 aa10.8□□□□□ -0.68
TMEM88-201ENST00000301599 VPS25Q9BRG1 176 aa10.8□□□□□ -0.68
TMEM88-201ENST00000301599 ATXN8Q156A1 80 aa10.79□□□□□ -0.68
TMEM88-201ENST00000301599 MEIG1Q5JSS6 88 aa10.79□□□□□ -0.68
TMEM88-201ENST00000301599 KRTAP13-1Q8IUC0 172 aa10.79□□□□□ -0.68
TMEM88-201ENST00000301599 A0A087X002 238 aa10.78□□□□□ -0.68
TMEM88-201ENST00000301599 PRR4Q16378 134 aa10.78□□□□□ -0.68
TMEM88-201ENST00000301599 TYMSOSQ8TAI1 123 aa10.78□□□□□ -0.68
TMEM88-201ENST00000301599 LINC00158P58513 81 aa10.77□□□□□ -0.69
TMEM88-201ENST00000301599 LINC00308Q8TCZ7 52 aa10.76□□□□□ -0.69
TMEM88-201ENST00000301599 PRO0461Q9UI25 63 aa10.76□□□□□ -0.69
TMEM88-201ENST00000301599 LPAP08519 4548 aa10.76□□□□□ -0.69
TMEM88-201ENST00000301599 ADAMTSL4-AS1Q5T5F5 129 aa10.75□□□□□ -0.69
TMEM88-201ENST00000301599 TMEM126AQ9H061 195 aa10.75□□□□□ -0.69
TMEM88-201ENST00000301599 ANAPC11Q9NYG5 84 aa10.75□□□□□ -0.69
TMEM88-201ENST00000301599 FAM19A1Q7Z5A9 133 aa10.74□□□□□ -0.69
TMEM88-201ENST00000301599 TRAV13-2A0A0B4J235 113 aa10.73□□□□□ -0.69
TMEM88-201ENST00000301599 TCL1BO95988 128 aa10.73□□□□□ -0.69
TMEM88-201ENST00000301599 FAM229BQ4G0N7 80 aa10.73□□□□□ -0.69
TMEM88-201ENST00000301599 PRLHP81277 87 aa10.72□□□□□ -0.69
TMEM88-201ENST00000301599 A0A0U1RRA0 63 aa10.71□□□□□ -0.69
TMEM88-201ENST00000301599 M0R378 163 aa10.71□□□□□ -0.69
TMEM88-201ENST00000301599 TEN1Q86WV5 123 aa10.71□□□□□ -0.69
TMEM88-201ENST00000301599 Q8NDZ9 215 aa10.71□□□□□ -0.69
TMEM88-201ENST00000301599 ETDBQ3ZM63 59 aa10.7□□□□□ -0.7
TMEM88-201ENST00000301599 PPDPFLQ8WWR9 84 aa10.7□□□□□ -0.7
TMEM88-201ENST00000301599 H7C2G1 150 aa10.69□□□□□ -0.7
TMEM88-201ENST00000301599 KRTAP13-2Q52LG2 175 aa10.69□□□□□ -0.7
TMEM88-201ENST00000301599 H3BT86 120 aa10.68□□□□□ -0.7
TMEM88-201ENST00000301599 SLC25A20O43772 301 aa10.68□□□□□ -0.7
TMEM88-201ENST00000301599 TRBV10-2A0A0K0K1G8 114 aa10.67□□□□□ -0.7
TMEM88-201ENST00000301599 TRIAP1O43715 76 aa10.67□□□□□ -0.7
TMEM88-201ENST00000301599 C9JAW5 83 aa10.65□□□□□ -0.7
TMEM88-201ENST00000301599 EIF4EBP3O60516 100 aaPredicted RBP10.65□□□□□ -0.7
TMEM88-201ENST00000301599 ANKRD29Q8N6D5 301 aa10.65□□□□□ -0.7
TMEM88-201ENST00000301599 LINC00304Q8N9R0 145 aa10.65□□□□□ -0.7
TMEM88-201ENST00000301599 MIR7-3HGQ8N6C7 128 aa10.64□□□□□ -0.71
TMEM88-201ENST00000301599 HIGD2AQ9BW72 106 aa10.64□□□□□ -0.71
TMEM88-201ENST00000301599 LST1O00453 97 aa10.63□□□□□ -0.71
TMEM88-201ENST00000301599 NPC2P61916 151 aa10.63□□□□□ -0.71
TMEM88-201ENST00000301599 DAND5Q8N907 189 aa10.62□□□□□ -0.71
TMEM88-201ENST00000301599 SMCPP49901 116 aaPredicted RBP10.61□□□□□ -0.71
TMEM88-201ENST00000301599 H0YGX0 51 aa10.6□□□□□ -0.71
TMEM88-201ENST00000301599 PRYO14603 147 aa10.6□□□□□ -0.71
TMEM88-201ENST00000301599 TRACP01848 142 aa10.6□□□□□ -0.71
TMEM88-201ENST00000301599 NCR3O14931 201 aa10.59□□□□□ -0.71
TMEM88-201ENST00000301599 SCGB1A1P11684 91 aa10.59□□□□□ -0.71
TMEM88-201ENST00000301599 SIGMAR1Q99720 223 aa10.59□□□□□ -0.71
TMEM88-201ENST00000301599 KCNQ1DNQ9H478 68 aa10.59□□□□□ -0.71
TMEM88-201ENST00000301599 NDUFC2O95298 119 aa10.58□□□□□ -0.72
TMEM88-201ENST00000301599 SOSTDC1Q6X4U4 206 aa10.58□□□□□ -0.72
TMEM88-201ENST00000301599 LINC00337Q8N6G1 96 aa10.58□□□□□ -0.72
TMEM88-201ENST00000301599 ZNF706Q9Y5V0 76 aaPredicted RBP10.58□□□□□ -0.72
TMEM88-201ENST00000301599 PCP4P48539 62 aa10.57□□□□□ -0.72
TMEM88-201ENST00000301599 SPRR4Q96PI1 79 aa10.57□□□□□ -0.72
TMEM88-201ENST00000301599 SNCGO76070 127 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms