RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 ACYP1P07311 99 aa9.43□□□□□ -0.9
SMG8-201ENST00000300917 SDIM1Q6ZPB5 146 aa9.43□□□□□ -0.9
SMG8-201ENST00000300917 A0A1B0GX51 115 aa9.43□□□□□ -0.9
SMG8-201ENST00000300917 UPK3BQ9BT76 320 aa9.43□□□□□ -0.9
SMG8-201ENST00000300917 PLECQ15149 4684 aaKnown RBP9.42□□□□□ -0.9
SMG8-201ENST00000300917 ELOF1P60002 83 aaKnown RBP9.42□□□□□ -0.9
SMG8-201ENST00000300917 OBSCN-AS1Q96MR7 158 aa9.42□□□□□ -0.9
SMG8-201ENST00000300917 A0A0U1RQV1 116 aa9.42□□□□□ -0.9
SMG8-201ENST00000300917 FUSP35637 526 aaKnown RBP eCLIP9.41□□□□□ -0.9
SMG8-201ENST00000300917 RBM3P98179 157 aaKnown RBP9.41□□□□□ -0.9
SMG8-201ENST00000300917 DNAH1Q9P2D7 4330 aa9.4□□□□□ -0.9
SMG8-201ENST00000300917 FAM236AA0A1B0GUQ0 79 aa9.4□□□□□ -0.9
SMG8-201ENST00000300917 FAM236BA0A1B0GV22 79 aa9.4□□□□□ -0.9
SMG8-201ENST00000300917 KRTAP7-1Q8IUC3 87 aa9.4□□□□□ -0.9
SMG8-201ENST00000300917 JMJD7-PLA2G4BH0Y9G9 81 aa9.4□□□□□ -0.9
SMG8-201ENST00000300917 LINC00643Q86TS7 51 aa9.4□□□□□ -0.9
SMG8-201ENST00000300917 J3KT08 172 aa9.39□□□□□ -0.91
SMG8-201ENST00000300917 CCKP06307 115 aa9.39□□□□□ -0.91
SMG8-201ENST00000300917 CHTF8P0CG12 524 aa9.38□□□□□ -0.91
SMG8-201ENST00000300917 LINC00528Q8N1L1 170 aa9.38□□□□□ -0.91
SMG8-201ENST00000300917 FAM236DA0A1B0GTK5 79 aa9.37□□□□□ -0.91
SMG8-201ENST00000300917 FAM236CP0DP71 79 aa9.37□□□□□ -0.91
SMG8-201ENST00000300917 C3orf22Q8N5N4 141 aa9.37□□□□□ -0.91
SMG8-201ENST00000300917 A0A096LNI7 61 aa9.37□□□□□ -0.91
SMG8-201ENST00000300917 A0A087WVE0 104 aa9.37□□□□□ -0.91
SMG8-201ENST00000300917 SRRM2Q9UQ35 2752 aaKnown RBP9.36□□□□□ -0.91
SMG8-201ENST00000300917 DSCR8Q96T75 97 aa9.36□□□□□ -0.91
SMG8-201ENST00000300917 STARD9Q9P2P6 4700 aa9.35□□□□□ -0.91
SMG8-201ENST00000300917 ETDCA0A1B0GVM5 59 aa9.34□□□□□ -0.91
SMG8-201ENST00000300917 TLX1NBP0CAT3 122 aa9.34□□□□□ -0.91
SMG8-201ENST00000300917 C9orf153Q5TBE3 101 aa9.34□□□□□ -0.91
SMG8-201ENST00000300917 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.34□□□□□ -0.91
SMG8-201ENST00000300917 MRPL55Q7Z7F7 128 aaKnown RBP9.34□□□□□ -0.91
SMG8-201ENST00000300917 HIST1H4AP62805 103 aaKnown RBP9.34□□□□□ -0.91
SMG8-201ENST00000300917 KCNQ1DNQ9H478 68 aa9.34□□□□□ -0.91
SMG8-201ENST00000300917 ST20-AS1Q8NBB2 130 aa9.33□□□□□ -0.92
SMG8-201ENST00000300917 TRBV7-7A0A0K0K1E9 115 aa9.32□□□□□ -0.92
SMG8-201ENST00000300917 A0A1W2PNN7 141 aa9.32□□□□□ -0.92
SMG8-201ENST00000300917 Q6ZQT0 140 aa9.32□□□□□ -0.92
SMG8-201ENST00000300917 IGLV1-50A0A075B6I6 118 aa9.32□□□□□ -0.92
SMG8-201ENST00000300917 UBE2BP63146 152 aa9.32□□□□□ -0.92
SMG8-201ENST00000300917 DPH3Q96FX2 82 aa9.32□□□□□ -0.92
SMG8-201ENST00000300917 NBDYA0A0U1RRE5 68 aa9.31□□□□□ -0.92
SMG8-201ENST00000300917 NUPR2A6NF83 97 aa9.3□□□□□ -0.92
SMG8-201ENST00000300917 Q9BRP9 147 aa9.3□□□□□ -0.92
SMG8-201ENST00000300917 ERC2-IT1O76042 136 aa9.3□□□□□ -0.92
SMG8-201ENST00000300917 HAMPP81172 84 aa9.3□□□□□ -0.92
SMG8-201ENST00000300917 FBN3Q75N90 2809 aa9.29□□□□□ -0.92
SMG8-201ENST00000300917 SCXQ7RTU7 201 aa9.29□□□□□ -0.92
SMG8-201ENST00000300917 PRLHP81277 87 aa9.29□□□□□ -0.92
SMG8-201ENST00000300917 TRBV7-6A0A0J9YX20 115 aa9.28□□□□□ -0.92
SMG8-201ENST00000300917 Q6ZRX8 168 aa9.28□□□□□ -0.92
SMG8-201ENST00000300917 UBL5Q9BZL1 73 aa9.28□□□□□ -0.92
SMG8-201ENST00000300917 FAM19A1Q7Z5A9 133 aa9.27□□□□□ -0.92
SMG8-201ENST00000300917 LINC00336Q6ZUF6 198 aa9.27□□□□□ -0.93
SMG8-201ENST00000300917 PHF5AQ7RTV0 110 aaKnown RBP9.27□□□□□ -0.93
SMG8-201ENST00000300917 Q8N377 158 aa9.27□□□□□ -0.93
SMG8-201ENST00000300917 C1orf195Q5TG92 126 aa9.26□□□□□ -0.93
SMG8-201ENST00000300917 HIGD2AQ9BW72 106 aa9.25□□□□□ -0.93
SMG8-201ENST00000300917 A0A0G2JQZ4 141 aa9.25□□□□□ -0.93
SMG8-201ENST00000300917 C16orf90A8MZG2 172 aa9.25□□□□□ -0.93
SMG8-201ENST00000300917 C3orf84H3BNL1 204 aa9.25□□□□□ -0.93
SMG8-201ENST00000300917 PRO0628Q9UI54 55 aa9.25□□□□□ -0.93
SMG8-201ENST00000300917 PLA2G2DQ9UNK4 145 aa9.25□□□□□ -0.93
SMG8-201ENST00000300917 Q6JHZ5 121 aa9.25□□□□□ -0.93
SMG8-201ENST00000300917 REG3GQ6UW15 175 aa9.25□□□□□ -0.93
SMG8-201ENST00000300917 PANO1I0J062 215 aa9.24□□□□□ -0.93
SMG8-201ENST00000300917 PRYO14603 147 aa9.24□□□□□ -0.93
SMG8-201ENST00000300917 C4orf48Q5BLP8 95 aa9.24□□□□□ -0.93
SMG8-201ENST00000300917 KRTAP11-1Q8IUC1 163 aa9.24□□□□□ -0.93
SMG8-201ENST00000300917 KRTAP4-16G5E9R7 235 aaPredicted RBP9.23□□□□□ -0.93
SMG8-201ENST00000300917 LOC110117498A0A087WWA1 95 aa9.23□□□□□ -0.93
SMG8-201ENST00000300917 CNBPP62633 177 aaKnown RBP9.23□□□□□ -0.93
SMG8-201ENST00000300917 IMUPQ9GZP8 106 aa9.23□□□□□ -0.93
SMG8-201ENST00000300917 LRCOL1A6NCL2 159 aa9.23□□□□□ -0.93
SMG8-201ENST00000300917 UQCRQO14949 82 aa9.22□□□□□ -0.93
SMG8-201ENST00000300917 Q6ZVQ6 151 aa9.22□□□□□ -0.93
SMG8-201ENST00000300917 KMT2AQ03164 3969 aa9.22□□□□□ -0.93
SMG8-201ENST00000300917 IGLV5-37A0A075B6J1 123 aa9.22□□□□□ -0.93
SMG8-201ENST00000300917 TRBV7-4A0A0J9YYF1 115 aa9.22□□□□□ -0.93
SMG8-201ENST00000300917 DHRS4-AS1Q9P1J3 65 aa9.21□□□□□ -0.94
SMG8-201ENST00000300917 GHRHP01286 108 aa9.2□□□□□ -0.94
SMG8-201ENST00000300917 LINC01547P58512 204 aaPredicted RBP9.2□□□□□ -0.94
SMG8-201ENST00000300917 DYNC2H1Q8NCM8 4307 aaKnown RBP9.2□□□□□ -0.94
SMG8-201ENST00000300917 SPRR1AP35321 89 aa9.2□□□□□ -0.94
SMG8-201ENST00000300917 C14orf177Q52M58 125 aa9.2□□□□□ -0.94
SMG8-201ENST00000300917 Q6ZRN7 208 aaPredicted RBP9.19□□□□□ -0.94
SMG8-201ENST00000300917 LY6G6CO95867 125 aa9.18□□□□□ -0.94
SMG8-201ENST00000300917 Q8N9L7 120 aa9.18□□□□□ -0.94
SMG8-201ENST00000300917 C9orf163Q8N9P6 203 aa9.18□□□□□ -0.94
SMG8-201ENST00000300917 H3BQ85 93 aa9.16□□□□□ -0.94
SMG8-201ENST00000300917 COX7CP15954 63 aa9.16□□□□□ -0.94
SMG8-201ENST00000300917 BRK1Q8WUW1 75 aa9.16□□□□□ -0.94
SMG8-201ENST00000300917 PDE6GP18545 87 aa9.15□□□□□ -0.94
SMG8-201ENST00000300917 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.15□□□□□ -0.94
SMG8-201ENST00000300917 OXTP01178 125 aa9.14□□□□□ -0.95
SMG8-201ENST00000300917 CYSTM1Q9H1C7 97 aa9.14□□□□□ -0.95
SMG8-201ENST00000300917 C1orf137Q5JT78 98 aa9.14□□□□□ -0.95
SMG8-201ENST00000300917 Q5XG85 94 aa9.14□□□□□ -0.95
SMG8-201ENST00000300917 VPS13DQ5THJ4 4388 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms