RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 CELSR2Q9HCU4 2923 aa5.48□□□□□ -1.53
SNRPD1-201ENST00000300413 NBEAL2Q6ZNJ1 2754 aa5.48□□□□□ -1.53
SNRPD1-201ENST00000300413 CASC10Q5T4H9 136 aa5.47□□□□□ -1.53
SNRPD1-201ENST00000300413 NF1P21359 2839 aa5.47□□□□□ -1.53
SNRPD1-201ENST00000300413 DCHS2Q6V1P9 2916 aa5.46□□□□□ -1.53
SNRPD1-201ENST00000300413 NSD1Q96L73 2696 aaPredicted RBP5.46□□□□□ -1.53
SNRPD1-201ENST00000300413 PHF5AQ7RTV0 110 aaKnown RBP5.46□□□□□ -1.53
SNRPD1-201ENST00000300413 IGLV1-50A0A075B6I6 118 aa5.46□□□□□ -1.54
SNRPD1-201ENST00000300413 APCP25054 2843 aa5.46□□□□□ -1.54
SNRPD1-201ENST00000300413 FAM236AA0A1B0GUQ0 79 aa5.45□□□□□ -1.54
SNRPD1-201ENST00000300413 FAM236BA0A1B0GV22 79 aa5.45□□□□□ -1.54
SNRPD1-201ENST00000300413 CIRBP-AS1Q8TBR5 109 aa5.45□□□□□ -1.54
SNRPD1-201ENST00000300413 IGLV5-37A0A075B6J1 123 aa5.45□□□□□ -1.54
SNRPD1-201ENST00000300413 CRYGAP11844 174 aa5.45□□□□□ -1.54
SNRPD1-201ENST00000300413 KMT2BQ9UMN6 2715 aaPredicted RBP5.45□□□□□ -1.54
SNRPD1-201ENST00000300413 Q8NBF4 154 aa5.44□□□□□ -1.54
SNRPD1-201ENST00000300413 EPM2AB3EWF7 344 aa5.43□□□□□ -1.54
SNRPD1-201ENST00000300413 NIPBLQ6KC79 2804 aaeCLIP5.43□□□□□ -1.54
SNRPD1-201ENST00000300413 RPL37AP61513 92 aaKnown RBP5.43□□□□□ -1.54
SNRPD1-201ENST00000300413 HIVEP1P15822 2718 aa5.43□□□□□ -1.54
SNRPD1-201ENST00000300413 J3QL48 77 aa5.42□□□□□ -1.54
SNRPD1-201ENST00000300413 LINC00528Q8N1L1 170 aa5.42□□□□□ -1.54
SNRPD1-201ENST00000300413 SPINK6Q6UWN8 80 aa5.42□□□□□ -1.54
SNRPD1-201ENST00000300413 CHTF8P0CG12 524 aa5.42□□□□□ -1.54
SNRPD1-201ENST00000300413 ZFHX4Q86UP3 3567 aa5.42□□□□□ -1.54
SNRPD1-201ENST00000300413 SERTAD4-AS1Q5TG53 156 aa5.41□□□□□ -1.54
SNRPD1-201ENST00000300413 HRCT1Q6UXD1 115 aa5.41□□□□□ -1.54
SNRPD1-201ENST00000300413 C9orf129Q5T035 196 aaKnown RBP5.41□□□□□ -1.54
SNRPD1-201ENST00000300413 Q6Q795 121 aa5.41□□□□□ -1.54
SNRPD1-201ENST00000300413 SDIM1Q6ZPB5 146 aa5.4□□□□□ -1.54
SNRPD1-201ENST00000300413 LOC110117498A0A087WWA1 95 aa5.4□□□□□ -1.54
SNRPD1-201ENST00000300413 A0A087WSZ3 146 aa5.4□□□□□ -1.55
SNRPD1-201ENST00000300413 ZNF861PO60384 105 aa5.4□□□□□ -1.55
SNRPD1-201ENST00000300413 IGKV4-1P06312 121 aa5.38□□□□□ -1.55
SNRPD1-201ENST00000300413 FBN2P35556 2912 aa5.38□□□□□ -1.55
SNRPD1-201ENST00000300413 HRNRQ86YZ3 2850 aaPredicted RBP5.38□□□□□ -1.55
SNRPD1-201ENST00000300413 SCXQ7RTU7 201 aa5.38□□□□□ -1.55
SNRPD1-201ENST00000300413 CXCL6P80162 114 aa5.38□□□□□ -1.55
SNRPD1-201ENST00000300413 SSBP3-AS1Q7Z2R9 100 aa5.38□□□□□ -1.55
SNRPD1-201ENST00000300413 MOBPQ13875 183 aa5.37□□□□□ -1.55
SNRPD1-201ENST00000300413 FAM168BA1KXE4 195 aa5.37□□□□□ -1.55
SNRPD1-201ENST00000300413 SPAG11AQ6PDA7 123 aa5.37□□□□□ -1.55
SNRPD1-201ENST00000300413 FAM104AQ969W3 186 aa5.37□□□□□ -1.55
SNRPD1-201ENST00000300413 TYMSOSQ8TAI1 123 aa5.37□□□□□ -1.55
SNRPD1-201ENST00000300413 FAM218AQ96MZ4 157 aa5.37□□□□□ -1.55
SNRPD1-201ENST00000300413 LCE6AA0A183 80 aa5.36□□□□□ -1.55
SNRPD1-201ENST00000300413 NDUFC1O43677 76 aa5.36□□□□□ -1.55
SNRPD1-201ENST00000300413 TRBV7-4A0A0J9YYF1 115 aa5.36□□□□□ -1.55
SNRPD1-201ENST00000300413 MT-ATP8P03928 68 aa5.36□□□□□ -1.55
SNRPD1-201ENST00000300413 Q6ZVQ6 151 aa5.36□□□□□ -1.55
SNRPD1-201ENST00000300413 SMG1Q96Q15 3661 aaKnown RBP5.35□□□□□ -1.55
SNRPD1-201ENST00000300413 UQCRQO14949 82 aa5.35□□□□□ -1.55
SNRPD1-201ENST00000300413 TNP2Q05952 138 aa5.35□□□□□ -1.55
SNRPD1-201ENST00000300413 CHKB-CPT1BH3BT56 60 aa5.35□□□□□ -1.55
SNRPD1-201ENST00000300413 IGLV7-43P04211 117 aa5.34□□□□□ -1.55
SNRPD1-201ENST00000300413 WFDC13Q8IUB5 93 aa5.34□□□□□ -1.55
SNRPD1-201ENST00000300413 TMEM258P61165 79 aa5.34□□□□□ -1.56
SNRPD1-201ENST00000300413 Q6ZQT0 140 aa5.34□□□□□ -1.56
SNRPD1-201ENST00000300413 PRO0461Q9UI25 63 aa5.34□□□□□ -1.56
SNRPD1-201ENST00000300413 XGP55808 180 aa5.33□□□□□ -1.56
SNRPD1-201ENST00000300413 SERP2Q8N6R1 65 aa5.33□□□□□ -1.56
SNRPD1-201ENST00000300413 A0A1W2PNN7 141 aa5.33□□□□□ -1.56
SNRPD1-201ENST00000300413 CASC2Q6XLA1 102 aa5.33□□□□□ -1.56
SNRPD1-201ENST00000300413 ATP5EP56381 51 aaPredicted RBP5.32□□□□□ -1.56
SNRPD1-201ENST00000300413 IGHV6-1A0A0B4J1U7 121 aa5.32□□□□□ -1.56
SNRPD1-201ENST00000300413 SPACA4Q8TDM5 124 aa5.32□□□□□ -1.56
SNRPD1-201ENST00000300413 ST20-AS1Q8NBB2 130 aa5.31□□□□□ -1.56
SNRPD1-201ENST00000300413 LINC00846Q9NV44 126 aa5.31□□□□□ -1.56
SNRPD1-201ENST00000300413 PSORS1C2Q9UIG4 136 aa5.31□□□□□ -1.56
SNRPD1-201ENST00000300413 PLAC8Q9NZF1 115 aa5.31□□□□□ -1.56
SNRPD1-201ENST00000300413 TRAV7A0A075B6U4 112 aa5.31□□□□□ -1.56
SNRPD1-201ENST00000300413 LINC01547P58512 204 aaPredicted RBP5.31□□□□□ -1.56
SNRPD1-201ENST00000300413 KRTAP26-1Q6PEX3 210 aa5.3□□□□□ -1.56
SNRPD1-201ENST00000300413 HCG22E2RYF7 251 aa5.3□□□□□ -1.56
SNRPD1-201ENST00000300413 EIF4EBP3O60516 100 aaPredicted RBP5.3□□□□□ -1.56
SNRPD1-201ENST00000300413 SMCPP49901 116 aaPredicted RBP5.3□□□□□ -1.56
SNRPD1-201ENST00000300413 TP53AIP1Q9HCN2 124 aa5.3□□□□□ -1.56
SNRPD1-201ENST00000300413 C8orf87E5RJ46 101 aa5.29□□□□□ -1.56
SNRPD1-201ENST00000300413 Q6ZR54 194 aa5.29□□□□□ -1.56
SNRPD1-201ENST00000300413 C3orf22Q8N5N4 141 aa5.29□□□□□ -1.56
SNRPD1-201ENST00000300413 SPRR4Q96PI1 79 aa5.29□□□□□ -1.56
SNRPD1-201ENST00000300413 TRBV7-7A0A0K0K1E9 115 aa5.28□□□□□ -1.56
SNRPD1-201ENST00000300413 C20orf197Q8N268 126 aa5.28□□□□□ -1.56
SNRPD1-201ENST00000300413 MXRA5Q9NR99 2828 aa5.28□□□□□ -1.56
SNRPD1-201ENST00000300413 COX7CP15954 63 aa5.27□□□□□ -1.57
SNRPD1-201ENST00000300413 Q8N377 158 aa5.27□□□□□ -1.57
SNRPD1-201ENST00000300413 LINC00304Q8N9R0 145 aa5.27□□□□□ -1.57
SNRPD1-201ENST00000300413 FAM229BQ4G0N7 80 aa5.27□□□□□ -1.57
SNRPD1-201ENST00000300413 C5orf47Q569G3 176 aa5.27□□□□□ -1.57
SNRPD1-201ENST00000300413 TENM4Q6N022 2769 aa5.26□□□□□ -1.57
SNRPD1-201ENST00000300413 KRTAP1-5Q9BYS1 174 aa5.26□□□□□ -1.57
SNRPD1-201ENST00000300413 CD164Q04900 197 aa5.25□□□□□ -1.57
SNRPD1-201ENST00000300413 SEC61GP60059 68 aa5.25□□□□□ -1.57
SNRPD1-201ENST00000300413 SPTSSBQ8NFR3 76 aa5.25□□□□□ -1.57
SNRPD1-201ENST00000300413 SPRR1AP35321 89 aa5.24□□□□□ -1.57
SNRPD1-201ENST00000300413 Q8N9L7 120 aa5.24□□□□□ -1.57
SNRPD1-201ENST00000300413 IGLV5-48A0A075B6I7 105 aa5.24□□□□□ -1.57
SNRPD1-201ENST00000300413 IGFL1Q6UW32 110 aa5.24□□□□□ -1.57
SNRPD1-201ENST00000300413 LINC01600Q96MT4 127 aa5.24□□□□□ -1.57
SNRPD1-201ENST00000300413 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms