RNA–Protein interactions for RNA: ENST00000298355.7

TRIM9-201, Transcript of tripartite motif containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM9, Length 5,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-201ENST00000298355 IGFL1Q6UW32 110 aa11.32□□□□□ -0.6
TRIM9-201ENST00000298355 A0A1W2PNM2 257 aa11.32□□□□□ -0.6
TRIM9-201ENST00000298355 C1orf134Q5TEV5 83 aa11.32□□□□□ -0.6
TRIM9-201ENST00000298355 IGLV1-50A0A075B6I6 118 aa11.31□□□□□ -0.6
TRIM9-201ENST00000298355 CSNK1G2-AS1Q8NCQ2 148 aa11.31□□□□□ -0.6
TRIM9-201ENST00000298355 IGKV2D-30A0A075B6S6 120 aa11.3□□□□□ -0.6
TRIM9-201ENST00000298355 UQCR11O14957 56 aa11.3□□□□□ -0.6
TRIM9-201ENST00000298355 IGKV2-30P06310 120 aa11.3□□□□□ -0.6
TRIM9-201ENST00000298355 H3BNG1 76 aa11.29□□□□□ -0.6
TRIM9-201ENST00000298355 EPG5Q9HCE0 2579 aa11.29□□□□□ -0.6
TRIM9-201ENST00000298355 TRANK1O15050 2925 aa11.28□□□□□ -0.6
TRIM9-201ENST00000298355 FAM168BA1KXE4 195 aa11.27□□□□□ -0.6
TRIM9-201ENST00000298355 PRR34Q9NV39 138 aa11.27□□□□□ -0.6
TRIM9-201ENST00000298355 FASNP49327 2511 aaKnown RBP11.27□□□□□ -0.6
TRIM9-201ENST00000298355 IGLV8-61A0A075B6I0 122 aa11.27□□□□□ -0.61
TRIM9-201ENST00000298355 ACANP16112 2415 aa11.25□□□□□ -0.61
TRIM9-201ENST00000298355 MKI67P46013 3256 aaKnown RBP11.25□□□□□ -0.61
TRIM9-201ENST00000298355 IGLV5-48A0A075B6I7 105 aa11.25□□□□□ -0.61
TRIM9-201ENST00000298355 MIR22HGQ0VDD5 57 aa11.24□□□□□ -0.61
TRIM9-201ENST00000298355 MRPL34Q9BQ48 92 aaKnown RBP11.24□□□□□ -0.61
TRIM9-201ENST00000298355 GIG44P09565 113 aaPredicted RBP11.24□□□□□ -0.61
TRIM9-201ENST00000298355 A0A0G2JQZ4 141 aa11.22□□□□□ -0.61
TRIM9-201ENST00000298355 A0A1W2PNN7 141 aa11.22□□□□□ -0.61
TRIM9-201ENST00000298355 Q8NAQ8 132 aa11.22□□□□□ -0.61
TRIM9-201ENST00000298355 Q75L30 129 aa11.21□□□□□ -0.61
TRIM9-201ENST00000298355 PHF5AQ7RTV0 110 aaKnown RBP11.21□□□□□ -0.62
TRIM9-201ENST00000298355 C15orf56Q8N910 161 aa11.19□□□□□ -0.62
TRIM9-201ENST00000298355 LAMA3Q16787 3333 aa11.19□□□□□ -0.62
TRIM9-201ENST00000298355 C8orf17Q9NRJ1 99 aa11.18□□□□□ -0.62
TRIM9-201ENST00000298355 Q8N9P0 234 aaPredicted RBP11.18□□□□□ -0.62
TRIM9-201ENST00000298355 DSCR10P59022 87 aa11.18□□□□□ -0.62
TRIM9-201ENST00000298355 C16orf90A8MZG2 172 aa11.17□□□□□ -0.62
TRIM9-201ENST00000298355 LINC00612Q8N6U2 182 aa11.17□□□□□ -0.62
TRIM9-201ENST00000298355 Q5VV11 94 aa11.15□□□□□ -0.62
TRIM9-201ENST00000298355 SPINT4Q6UDR6 99 aa11.12□□□□□ -0.63
TRIM9-201ENST00000298355 PLA2G2DQ9UNK4 145 aa11.12□□□□□ -0.63
TRIM9-201ENST00000298355 LINC00313P59037 77 aa11.11□□□□□ -0.63
TRIM9-201ENST00000298355 LINC00588Q9Y4M8 146 aa11.11□□□□□ -0.63
TRIM9-201ENST00000298355 BRCA2P51587 3418 aa11.11□□□□□ -0.63
TRIM9-201ENST00000298355 C19orf73Q9NVV2 129 aa11.1□□□□□ -0.63
TRIM9-201ENST00000298355 FAM229AH3BQW9 127 aa11.1□□□□□ -0.63
TRIM9-201ENST00000298355 SPRR4Q96PI1 79 aa11.1□□□□□ -0.63
TRIM9-201ENST00000298355 H3BS24 57 aa11.09□□□□□ -0.63
TRIM9-201ENST00000298355 IGLV7-46A0A075B6I9 117 aa11.08□□□□□ -0.64
TRIM9-201ENST00000298355 A0A1B0GVX0 72 aa11.08□□□□□ -0.64
TRIM9-201ENST00000298355 LINC01554Q52M75 96 aa11.07□□□□□ -0.64
TRIM9-201ENST00000298355 F8P00451 2351 aa11.07□□□□□ -0.64
TRIM9-201ENST00000298355 TLX1NBP0CAT3 122 aa11.07□□□□□ -0.64
TRIM9-201ENST00000298355 DNAH10OSP0CZ25 163 aa11.07□□□□□ -0.64
TRIM9-201ENST00000298355 SSBP3-AS1Q7Z2R9 100 aa11.06□□□□□ -0.64
TRIM9-201ENST00000298355 Q8NDZ9 215 aa11.05□□□□□ -0.64
TRIM9-201ENST00000298355 LINC01558Q9Y6Z2 57 aa11.04□□□□□ -0.64
TRIM9-201ENST00000298355 CHTF8P0CG12 524 aa11.03□□□□□ -0.64
TRIM9-201ENST00000298355 PRR26Q8N8Z3 221 aa11.03□□□□□ -0.64
TRIM9-201ENST00000298355 SPACA4Q8TDM5 124 aa11.01□□□□□ -0.65
TRIM9-201ENST00000298355 PRAC1Q96KF2 57 aa11□□□□□ -0.65
TRIM9-201ENST00000298355 PLA2G1BP04054 148 aaKnown RBP10.97□□□□□ -0.65
TRIM9-201ENST00000298355 LAMA2P24043 3122 aaKnown RBP10.95□□□□□ -0.66
TRIM9-201ENST00000298355 C9orf163Q8N9P6 203 aa10.93□□□□□ -0.66
TRIM9-201ENST00000298355 CR1P17927 2039 aa10.93□□□□□ -0.66
TRIM9-201ENST00000298355 IGLV5-37A0A075B6J1 123 aa10.93□□□□□ -0.66
TRIM9-201ENST00000298355 CFAP54Q96N23 3096 aa10.93□□□□□ -0.66
TRIM9-201ENST00000298355 PRUNE2Q8WUY3 3088 aa10.93□□□□□ -0.66
TRIM9-201ENST00000298355 CNBPP62633 177 aaKnown RBP10.91□□□□□ -0.66
TRIM9-201ENST00000298355 UNC80Q8N2C7 3258 aa10.9□□□□□ -0.66
TRIM9-201ENST00000298355 TYMSOSQ8TAI1 123 aa10.9□□□□□ -0.66
TRIM9-201ENST00000298355 SPINK7P58062 85 aa10.89□□□□□ -0.67
TRIM9-201ENST00000298355 ZNF292O60281 2723 aa10.88□□□□□ -0.67
TRIM9-201ENST00000298355 HECTD1Q9ULT8 2610 aa10.88□□□□□ -0.67
TRIM9-201ENST00000298355 FLNBO75369 2602 aaKnown RBP10.86□□□□□ -0.67
TRIM9-201ENST00000298355 CRIPTQ9P021 101 aa10.84□□□□□ -0.67
TRIM9-201ENST00000298355 HRES1P13985 223 aa10.83□□□□□ -0.68
TRIM9-201ENST00000298355 Q96NJ1 140 aa10.83□□□□□ -0.68
TRIM9-201ENST00000298355 MGAQ8IWI9 3026 aa10.82□□□□□ -0.68
TRIM9-201ENST00000298355 RTL8CO15255 209 aa10.81□□□□□ -0.68
TRIM9-201ENST00000298355 MMP24-AS1A0A0U1RRL7 71 aa10.81□□□□□ -0.68
TRIM9-201ENST00000298355 KRTAP24-1Q3LI83 254 aa10.81□□□□□ -0.68
TRIM9-201ENST00000298355 NBDYA0A0U1RRE5 68 aa10.8□□□□□ -0.68
TRIM9-201ENST00000298355 CASC10Q5T4H9 136 aa10.8□□□□□ -0.68
TRIM9-201ENST00000298355 TRIOO75962 3097 aa10.8□□□□□ -0.68
TRIM9-201ENST00000298355 ZCCHC13Q8WW36 166 aaKnown RBP10.78□□□□□ -0.68
TRIM9-201ENST00000298355 CENPEQ02224 2701 aa10.77□□□□□ -0.69
TRIM9-201ENST00000298355 CDH23Q9H251 3354 aa10.76□□□□□ -0.69
TRIM9-201ENST00000298355 FLNAP21333 2647 aaKnown RBP10.76□□□□□ -0.69
TRIM9-201ENST00000298355 CSAG1Q6PB30 78 aa10.76□□□□□ -0.69
TRIM9-201ENST00000298355 SPRR1AP35321 89 aa10.75□□□□□ -0.69
TRIM9-201ENST00000298355 WDFY4Q6ZS81 3184 aa10.74□□□□□ -0.69
TRIM9-201ENST00000298355 KRTAP1-3Q8IUG1 177 aa10.72□□□□□ -0.69
TRIM9-201ENST00000298355 ZNF861PO60384 105 aa10.71□□□□□ -0.69
TRIM9-201ENST00000298355 COX6B2Q6YFQ2 88 aa10.71□□□□□ -0.7
TRIM9-201ENST00000298355 ANAPC11Q9NYG5 84 aa10.71□□□□□ -0.7
TRIM9-201ENST00000298355 J3QL48 77 aa10.7□□□□□ -0.7
TRIM9-201ENST00000298355 ITPR3Q14573 2671 aa10.69□□□□□ -0.7
TRIM9-201ENST00000298355 LINC00472Q9H8W2 130 aa10.69□□□□□ -0.7
TRIM9-201ENST00000298355 A6NN06 94 aa10.68□□□□□ -0.7
TRIM9-201ENST00000298355 WWC2-AS2Q96NR7 200 aa10.67□□□□□ -0.7
TRIM9-201ENST00000298355 XIRP2A4UGR9 3374 aa10.67□□□□□ -0.7
TRIM9-201ENST00000298355 KRTAP10-3P60369 221 aa10.67□□□□□ -0.7
TRIM9-201ENST00000298355 TNP2Q05952 138 aa10.66□□□□□ -0.7
TRIM9-201ENST00000298355 APLNQ9ULZ1 77 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms