RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 Q6ZRX8 168 aa8.21□□□□□ -1.1
PCF11-201ENST00000298281 TRBV7-4A0A0J9YYF1 115 aa8.21□□□□□ -1.1
PCF11-201ENST00000298281 TM2D3Q9BRN9 247 aa8.2□□□□□ -1.1
PCF11-201ENST00000298281 RPS28P62857 69 aaKnown RBP8.2□□□□□ -1.1
PCF11-201ENST00000298281 KTN1-AS1Q86SY8 53 aa8.19□□□□□ -1.1
PCF11-201ENST00000298281 LINC00336Q6ZUF6 198 aa8.18□□□□□ -1.1
PCF11-201ENST00000298281 PSORS1C2Q9UIG4 136 aa8.18□□□□□ -1.1
PCF11-201ENST00000298281 A8MUN3 132 aa8.16□□□□□ -1.1
PCF11-201ENST00000298281 FAM168BA1KXE4 195 aa8.16□□□□□ -1.1
PCF11-201ENST00000298281 TLX1NBP0CAT3 122 aa8.16□□□□□ -1.1
PCF11-201ENST00000298281 CYP4F30PQ9H0H9 118 aa8.16□□□□□ -1.1
PCF11-201ENST00000298281 GVQW2A0A096LPI5 108 aaPredicted RBP8.15□□□□□ -1.1
PCF11-201ENST00000298281 WIPF1O43516 503 aa8.15□□□□□ -1.11
PCF11-201ENST00000298281 USP24Q9UPU5 2620 aa8.15□□□□□ -1.11
PCF11-201ENST00000298281 Q6ZSA8 131 aa8.13□□□□□ -1.11
PCF11-201ENST00000298281 LINC00588Q9Y4M8 146 aa8.12□□□□□ -1.11
PCF11-201ENST00000298281 Q8N1X5 172 aa8.12□□□□□ -1.11
PCF11-201ENST00000298281 IGLV1-50A0A075B6I6 118 aa8.11□□□□□ -1.11
PCF11-201ENST00000298281 EPG5Q9HCE0 2579 aa8.1□□□□□ -1.11
PCF11-201ENST00000298281 DNAH10OSP0CZ25 163 aa8.1□□□□□ -1.11
PCF11-201ENST00000298281 FAM218AQ96MZ4 157 aa8.09□□□□□ -1.11
PCF11-201ENST00000298281 Q8NAQ8 132 aa8.09□□□□□ -1.12
PCF11-201ENST00000298281 SMCPP49901 116 aaPredicted RBP8.07□□□□□ -1.12
PCF11-201ENST00000298281 PRO0461Q9UI25 63 aa8.06□□□□□ -1.12
PCF11-201ENST00000298281 A0A0A0MQY5 61 aa8.06□□□□□ -1.12
PCF11-201ENST00000298281 HRES1P13985 223 aa8.05□□□□□ -1.12
PCF11-201ENST00000298281 PLAC4Q8WY50 150 aa8.05□□□□□ -1.12
PCF11-201ENST00000298281 FAM104AQ969W3 186 aa8.05□□□□□ -1.12
PCF11-201ENST00000298281 A0A1B0GVX0 72 aa8.05□□□□□ -1.12
PCF11-201ENST00000298281 CD164Q04900 197 aa8.04□□□□□ -1.12
PCF11-201ENST00000298281 LCA10Q71F78 164 aa8.04□□□□□ -1.12
PCF11-201ENST00000298281 CENPFP49454 3210 aa8.04□□□□□ -1.12
PCF11-201ENST00000298281 ZNF861PO60384 105 aa8.03□□□□□ -1.12
PCF11-201ENST00000298281 Q1T7F1 81 aa8.03□□□□□ -1.12
PCF11-201ENST00000298281 KRTAP24-1Q3LI83 254 aa8.03□□□□□ -1.12
PCF11-201ENST00000298281 ANAPC11Q9NYG5 84 aa8.02□□□□□ -1.12
PCF11-201ENST00000298281 KLK9Q2XQG4 91 aa8.02□□□□□ -1.13
PCF11-201ENST00000298281 PRR15Q8IV56 129 aa8.01□□□□□ -1.13
PCF11-201ENST00000298281 KCNQ1DNQ9H478 68 aa8□□□□□ -1.13
PCF11-201ENST00000298281 COL4A2P08572 1712 aa7.98□□□□□ -1.13
PCF11-201ENST00000298281 DNAH12Q6ZR08 3092 aa7.98□□□□□ -1.13
PCF11-201ENST00000298281 IGFL1Q6UW32 110 aa7.97□□□□□ -1.13
PCF11-201ENST00000298281 PCNTO95613 3336 aa7.96□□□□□ -1.13
PCF11-201ENST00000298281 H1FX-AS1Q4G0G2 97 aa7.95□□□□□ -1.14
PCF11-201ENST00000298281 LINC00528Q8N1L1 170 aa7.94□□□□□ -1.14
PCF11-201ENST00000298281 LITAFQ99732 161 aa7.94□□□□□ -1.14
PCF11-201ENST00000298281 MGAM2Q2M2H8 2515 aa7.93□□□□□ -1.14
PCF11-201ENST00000298281 IGLV7-46A0A075B6I9 117 aa7.92□□□□□ -1.14
PCF11-201ENST00000298281 C9orf163Q8N9P6 203 aa7.92□□□□□ -1.14
PCF11-201ENST00000298281 PRR26Q8N8Z3 221 aa7.92□□□□□ -1.14
PCF11-201ENST00000298281 C15orf56Q8N910 161 aa7.92□□□□□ -1.14
PCF11-201ENST00000298281 PRR34Q9NV39 138 aa7.91□□□□□ -1.14
PCF11-201ENST00000298281 A0A0G2JQZ4 141 aa7.9□□□□□ -1.14
PCF11-201ENST00000298281 A0A1W2PNN7 141 aa7.9□□□□□ -1.14
PCF11-201ENST00000298281 FLNBO75369 2602 aaKnown RBP7.9□□□□□ -1.14
PCF11-201ENST00000298281 IGLV7-43P04211 117 aa7.9□□□□□ -1.14
PCF11-201ENST00000298281 KLKP1Q107X0 134 aa7.89□□□□□ -1.15
PCF11-201ENST00000298281 SPINK7P58062 85 aa7.89□□□□□ -1.15
PCF11-201ENST00000298281 S4R3F8 94 aa7.89□□□□□ -1.15
PCF11-201ENST00000298281 A0A087WTM6 91 aa7.88□□□□□ -1.15
PCF11-201ENST00000298281 A0A1B0GU33 70 aa7.88□□□□□ -1.15
PCF11-201ENST00000298281 R4GN34 69 aa7.84□□□□□ -1.15
PCF11-201ENST00000298281 MAST4O15021 2626 aa7.84□□□□□ -1.15
PCF11-201ENST00000298281 C19orf73Q9NVV2 129 aa7.84□□□□□ -1.16
PCF11-201ENST00000298281 Q8N377 158 aa7.83□□□□□ -1.16
PCF11-201ENST00000298281 Q5VSD8 79 aa7.83□□□□□ -1.16
PCF11-201ENST00000298281 PRRC2CQ9Y520 2896 aaKnown RBP7.83□□□□□ -1.16
PCF11-201ENST00000298281 K7EIL1 84 aa7.81□□□□□ -1.16
PCF11-201ENST00000298281 CSAG1Q6PB30 78 aa7.81□□□□□ -1.16
PCF11-201ENST00000298281 ATRQ13535 2644 aa7.8□□□□□ -1.16
PCF11-201ENST00000298281 SPANXA2-OT1Q8N9U9 137 aa7.8□□□□□ -1.16
PCF11-201ENST00000298281 LINC00612Q8N6U2 182 aa7.79□□□□□ -1.16
PCF11-201ENST00000298281 C5orf42Q9H799 3197 aa7.78□□□□□ -1.16
PCF11-201ENST00000298281 CNBPP62633 177 aaKnown RBP7.76□□□□□ -1.17
PCF11-201ENST00000298281 DMAC1Q96GE9 116 aa7.76□□□□□ -1.17
PCF11-201ENST00000298281 H3BS24 57 aa7.76□□□□□ -1.17
PCF11-201ENST00000298281 KRTAP10-11P60412 298 aa7.75□□□□□ -1.17
PCF11-201ENST00000298281 HECTD1Q9ULT8 2610 aa7.75□□□□□ -1.17
PCF11-201ENST00000298281 SPRR4Q96PI1 79 aa7.74□□□□□ -1.17
PCF11-201ENST00000298281 H7BZZ5 65 aa7.73□□□□□ -1.17
PCF11-201ENST00000298281 CEP350Q5VT06 3117 aa7.73□□□□□ -1.17
PCF11-201ENST00000298281 GIG44P09565 113 aaPredicted RBP7.71□□□□□ -1.18
PCF11-201ENST00000298281 EIF4EBP3O60516 100 aaPredicted RBP7.69□□□□□ -1.18
PCF11-201ENST00000298281 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.68□□□□□ -1.18
PCF11-201ENST00000298281 STAB1Q9NY15 2570 aa7.68□□□□□ -1.18
PCF11-201ENST00000298281 SEC61BP60468 96 aaKnown RBP7.67□□□□□ -1.18
PCF11-201ENST00000298281 CFAP46Q8IYW2 2715 aa7.66□□□□□ -1.18
PCF11-201ENST00000298281 A0A096LNT2 108 aa7.66□□□□□ -1.18
PCF11-201ENST00000298281 A0A1W2PNM2 257 aa7.65□□□□□ -1.18
PCF11-201ENST00000298281 M0QZ58 72 aa7.62□□□□□ -1.19
PCF11-201ENST00000298281 Q8N9P0 234 aaPredicted RBP7.61□□□□□ -1.19
PCF11-201ENST00000298281 FLNAP21333 2647 aaKnown RBP7.61□□□□□ -1.19
PCF11-201ENST00000298281 MKI67P46013 3256 aaKnown RBP7.61□□□□□ -1.19
PCF11-201ENST00000298281 TNP2Q05952 138 aa7.6□□□□□ -1.19
PCF11-201ENST00000298281 KRTAP10-3P60369 221 aa7.58□□□□□ -1.2
PCF11-201ENST00000298281 DMBT1Q9UGM3 2413 aaPredicted RBP7.58□□□□□ -1.2
PCF11-201ENST00000298281 AKAP13Q12802 2813 aa7.58□□□□□ -1.2
PCF11-201ENST00000298281 C20orf166-AS1Q96NR2 134 aa7.57□□□□□ -1.2
PCF11-201ENST00000298281 HELZ2Q9BYK8 2649 aaKnown RBP7.57□□□□□ -1.2
PCF11-201ENST00000298281 ITPR3Q14573 2671 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms