RNA–Protein interactions for RNA: ENST00000295628.3

LRRC58-201, Transcript of leucine rich repeat containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC58, Length 7,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58-201ENST00000295628 CAMK2N1Q7Z7J9 78 aa11.11□□□□□ -0.63
LRRC58-201ENST00000295628 Q1T7F1 81 aa11.09□□□□□ -0.63
LRRC58-201ENST00000295628 KLKP1Q107X0 134 aa11.08□□□□□ -0.64
LRRC58-201ENST00000295628 ZNF861PO60384 105 aa11.08□□□□□ -0.64
LRRC58-201ENST00000295628 C15orf56Q8N910 161 aa11.08□□□□□ -0.64
LRRC58-201ENST00000295628 KCNQ1DNQ9H478 68 aa11.08□□□□□ -0.64
LRRC58-201ENST00000295628 ABCA12Q86UK0 2595 aa11.07□□□□□ -0.64
LRRC58-201ENST00000295628 ANKRD17O75179 2603 aaKnown RBP11.07□□□□□ -0.64
LRRC58-201ENST00000295628 H7BZZ5 65 aa11.06□□□□□ -0.64
LRRC58-201ENST00000295628 Q8N377 158 aa11.06□□□□□ -0.64
LRRC58-201ENST00000295628 WWC2-AS2Q96NR7 200 aa11.06□□□□□ -0.64
LRRC58-201ENST00000295628 LITAFQ99732 161 aa11.04□□□□□ -0.64
LRRC58-201ENST00000295628 ZNF462Q96JM2 2506 aa11.04□□□□□ -0.64
LRRC58-201ENST00000295628 JMJD1CQ15652 2540 aa11.02□□□□□ -0.64
LRRC58-201ENST00000295628 M0R2T5 61 aa11.02□□□□□ -0.65
LRRC58-201ENST00000295628 LINC00528Q8N1L1 170 aa11.01□□□□□ -0.65
LRRC58-201ENST00000295628 H3BS24 57 aa11□□□□□ -0.65
LRRC58-201ENST00000295628 KRTAP24-1Q3LI83 254 aa11□□□□□ -0.65
LRRC58-201ENST00000295628 PLA2G2DQ9UNK4 145 aa10.97□□□□□ -0.65
LRRC58-201ENST00000295628 COL4A2P08572 1712 aa10.97□□□□□ -0.65
LRRC58-201ENST00000295628 C9orf163Q8N9P6 203 aa10.95□□□□□ -0.66
LRRC58-201ENST00000295628 A0A0A0MQY5 61 aa10.94□□□□□ -0.66
LRRC58-201ENST00000295628 SPANXA2-OT1Q8N9U9 137 aa10.94□□□□□ -0.66
LRRC58-201ENST00000295628 FLG2Q5D862 2391 aaPredicted RBP10.93□□□□□ -0.66
LRRC58-201ENST00000295628 IGF2RP11717 2491 aa10.92□□□□□ -0.66
LRRC58-201ENST00000295628 TLX1NBP0CAT3 122 aa10.92□□□□□ -0.66
LRRC58-201ENST00000295628 PRR26Q8N8Z3 221 aa10.92□□□□□ -0.66
LRRC58-201ENST00000295628 IGLV7-43P04211 117 aa10.91□□□□□ -0.66
LRRC58-201ENST00000295628 SETD2Q9BYW2 2564 aaPredicted RBP10.91□□□□□ -0.66
LRRC58-201ENST00000295628 Q6ZSA8 131 aa10.91□□□□□ -0.66
LRRC58-201ENST00000295628 A0A1B0GU33 70 aa10.9□□□□□ -0.66
LRRC58-201ENST00000295628 PSORS1C2Q9UIG4 136 aa10.89□□□□□ -0.67
LRRC58-201ENST00000295628 EIF4EBP3O60516 100 aaPredicted RBP10.88□□□□□ -0.67
LRRC58-201ENST00000295628 A0A087WTM6 91 aa10.87□□□□□ -0.67
LRRC58-201ENST00000295628 PKD1L2Q7Z442 2459 aa10.85□□□□□ -0.67
LRRC58-201ENST00000295628 BPTFQ12830 3046 aa10.85□□□□□ -0.67
LRRC58-201ENST00000295628 KRTAP10-11P60412 298 aa10.84□□□□□ -0.67
LRRC58-201ENST00000295628 SPRR4Q96PI1 79 aa10.82□□□□□ -0.68
LRRC58-201ENST00000295628 CENPFP49454 3210 aa10.81□□□□□ -0.68
LRRC58-201ENST00000295628 SPINK7P58062 85 aa10.78□□□□□ -0.68
LRRC58-201ENST00000295628 PRAC1Q96KF2 57 aa10.77□□□□□ -0.68
LRRC58-201ENST00000295628 CSAG1Q6PB30 78 aa10.77□□□□□ -0.69
LRRC58-201ENST00000295628 S4R3F8 94 aa10.77□□□□□ -0.69
LRRC58-201ENST00000295628 K7EIL1 84 aa10.76□□□□□ -0.69
LRRC58-201ENST00000295628 HRES1P13985 223 aa10.74□□□□□ -0.69
LRRC58-201ENST00000295628 A0A1W2PNM2 257 aa10.73□□□□□ -0.69
LRRC58-201ENST00000295628 PRR34Q9NV39 138 aa10.73□□□□□ -0.69
LRRC58-201ENST00000295628 Q75L30 129 aa10.72□□□□□ -0.69
LRRC58-201ENST00000295628 IGLV7-46A0A075B6I9 117 aa10.7□□□□□ -0.7
LRRC58-201ENST00000295628 FAM229BQ4G0N7 80 aa10.7□□□□□ -0.7
LRRC58-201ENST00000295628 DMAC1Q96GE9 116 aa10.7□□□□□ -0.7
LRRC58-201ENST00000295628 CASC10Q5T4H9 136 aa10.69□□□□□ -0.7
LRRC58-201ENST00000295628 USP9XQ93008 2570 aaPredicted RBP10.69□□□□□ -0.7
LRRC58-201ENST00000295628 SPTBN4Q9H254 2564 aa10.69□□□□□ -0.7
LRRC58-201ENST00000295628 LINC00612Q8N6U2 182 aa10.68□□□□□ -0.7
LRRC58-201ENST00000295628 PIEZO1Q92508 2521 aa10.66□□□□□ -0.7
LRRC58-201ENST00000295628 GOLGB1Q14789 3259 aaKnown RBP10.64□□□□□ -0.71
LRRC58-201ENST00000295628 OCR1Q9BZK8 76 aa10.64□□□□□ -0.71
LRRC58-201ENST00000295628 GIG44P09565 113 aaPredicted RBP10.62□□□□□ -0.71
LRRC58-201ENST00000295628 CHD8Q9HCK8 2581 aa10.61□□□□□ -0.71
LRRC58-201ENST00000295628 MTORP42345 2549 aa10.61□□□□□ -0.71
LRRC58-201ENST00000295628 H1FX-AS1Q4G0G2 97 aa10.61□□□□□ -0.71
LRRC58-201ENST00000295628 NCOR2Q9Y618 2525 aa10.61□□□□□ -0.71
LRRC58-201ENST00000295628 R4GN34 69 aa10.6□□□□□ -0.71
LRRC58-201ENST00000295628 C19orf73Q9NVV2 129 aa10.57□□□□□ -0.72
LRRC58-201ENST00000295628 CNBPP62633 177 aaKnown RBP10.57□□□□□ -0.72
LRRC58-201ENST00000295628 USP24Q9UPU5 2620 aa10.52□□□□□ -0.73
LRRC58-201ENST00000295628 KRTAP10-3P60369 221 aa10.52□□□□□ -0.73
LRRC58-201ENST00000295628 LINC01558Q9Y6Z2 57 aa10.52□□□□□ -0.73
LRRC58-201ENST00000295628 Q8N9P0 234 aaPredicted RBP10.5□□□□□ -0.73
LRRC58-201ENST00000295628 ZCCHC13Q8WW36 166 aaKnown RBP10.49□□□□□ -0.73
LRRC58-201ENST00000295628 ROMO1P60602 79 aa10.49□□□□□ -0.73
LRRC58-201ENST00000295628 ANKRD11Q6UB99 2663 aaPredicted RBP10.49□□□□□ -0.73
LRRC58-201ENST00000295628 EP400Q96L91 3159 aa10.47□□□□□ -0.73
LRRC58-201ENST00000295628 TNP2Q05952 138 aa10.46□□□□□ -0.74
LRRC58-201ENST00000295628 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.45□□□□□ -0.74
LRRC58-201ENST00000295628 Q5VV11 94 aa10.44□□□□□ -0.74
LRRC58-201ENST00000295628 C10orf142B7Z368 130 aa10.43□□□□□ -0.74
LRRC58-201ENST00000295628 PRRC2CQ9Y520 2896 aaKnown RBP10.43□□□□□ -0.74
LRRC58-201ENST00000295628 Q5XG85 94 aa10.42□□□□□ -0.74
LRRC58-201ENST00000295628 PLAC4Q8WY50 150 aa10.41□□□□□ -0.74
LRRC58-201ENST00000295628 USP9YO00507 2555 aaPredicted RBP10.4□□□□□ -0.74
LRRC58-201ENST00000295628 M0QZ58 72 aa10.39□□□□□ -0.75
LRRC58-201ENST00000295628 Q5W150 140 aa10.38□□□□□ -0.75
LRRC58-201ENST00000295628 POLQO75417 2590 aa10.38□□□□□ -0.75
LRRC58-201ENST00000295628 RPL37P61927 97 aaKnown RBP10.36□□□□□ -0.75
LRRC58-201ENST00000295628 MMP24-AS1A0A0U1RRL7 71 aa10.34□□□□□ -0.75
LRRC58-201ENST00000295628 FP248Q71RG6 208 aaPredicted RBP10.34□□□□□ -0.75
LRRC58-201ENST00000295628 KLK9Q2XQG4 91 aa10.34□□□□□ -0.75
LRRC58-201ENST00000295628 KRTAP16-1A8MUX0 517 aa10.33□□□□□ -0.76
LRRC58-201ENST00000295628 DNAH12Q6ZR08 3092 aa10.3□□□□□ -0.76
LRRC58-201ENST00000295628 CYSTM1Q9H1C7 97 aa10.29□□□□□ -0.76
LRRC58-201ENST00000295628 ADM2Q7Z4H4 148 aa10.28□□□□□ -0.76
LRRC58-201ENST00000295628 SPATA8Q6RVD6 105 aa10.27□□□□□ -0.77
LRRC58-201ENST00000295628 UTRNP46939 3433 aa10.26□□□□□ -0.77
LRRC58-201ENST00000295628 C20orf166-AS1Q96NR2 134 aa10.25□□□□□ -0.77
LRRC58-201ENST00000295628 SEC61BP60468 96 aaKnown RBP10.23□□□□□ -0.77
LRRC58-201ENST00000295628 A0A096LNT2 108 aa10.19□□□□□ -0.78
LRRC58-201ENST00000295628 Q5VSD8 79 aa10.18□□□□□ -0.78
LRRC58-201ENST00000295628 FASNP49327 2511 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms