RNA–Protein interactions for RNA: ENST00000282928.4

ZIC1-201, Transcript of Zic family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC1, Length 5,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC1-201ENST00000282928 SMIM29Q86T20 159 aa11.89□□□□□ -0.51
ZIC1-201ENST00000282928 SERTAD4-AS1Q5TG53 156 aa11.89□□□□□ -0.51
ZIC1-201ENST00000282928 PRO0461Q9UI25 63 aa11.89□□□□□ -0.51
ZIC1-201ENST00000282928 C7orf65Q6ZTY9 151 aa11.89□□□□□ -0.51
ZIC1-201ENST00000282928 ERC2-IT1O76042 136 aa11.88□□□□□ -0.51
ZIC1-201ENST00000282928 RPS28P62857 69 aaKnown RBP11.88□□□□□ -0.51
ZIC1-201ENST00000282928 CHD7Q9P2D1 2997 aa11.87□□□□□ -0.51
ZIC1-201ENST00000282928 IGLV7-43P04211 117 aa11.86□□□□□ -0.51
ZIC1-201ENST00000282928 MRPL34Q9BQ48 92 aaKnown RBP11.84□□□□□ -0.51
ZIC1-201ENST00000282928 CDIP1Q9H305 208 aa11.84□□□□□ -0.51
ZIC1-201ENST00000282928 PCNTO95613 3336 aa11.83□□□□□ -0.52
ZIC1-201ENST00000282928 RETNLBQ9BQ08 111 aa11.83□□□□□ -0.52
ZIC1-201ENST00000282928 SMCPP49901 116 aaPredicted RBP11.82□□□□□ -0.52
ZIC1-201ENST00000282928 C9orf129Q5T035 196 aaKnown RBP11.82□□□□□ -0.52
ZIC1-201ENST00000282928 RANBP2P49792 3224 aaKnown RBP11.8□□□□□ -0.52
ZIC1-201ENST00000282928 FAM168BA1KXE4 195 aa11.8□□□□□ -0.52
ZIC1-201ENST00000282928 HELZ2Q9BYK8 2649 aaKnown RBP11.8□□□□□ -0.52
ZIC1-201ENST00000282928 CD164Q04900 197 aa11.79□□□□□ -0.52
ZIC1-201ENST00000282928 Q96NJ1 140 aa11.79□□□□□ -0.52
ZIC1-201ENST00000282928 PMAIP1Q13794 54 aa11.78□□□□□ -0.52
ZIC1-201ENST00000282928 SPINK1P00995 79 aa11.77□□□□□ -0.53
ZIC1-201ENST00000282928 HTTP42858 3142 aa11.75□□□□□ -0.53
ZIC1-201ENST00000282928 IGFL1Q6UW32 110 aa11.75□□□□□ -0.53
ZIC1-201ENST00000282928 SPRR4Q96PI1 79 aa11.75□□□□□ -0.53
ZIC1-201ENST00000282928 CHD9Q3L8U1 2897 aa11.74□□□□□ -0.53
ZIC1-201ENST00000282928 PRR15Q8IV56 129 aa11.72□□□□□ -0.53
ZIC1-201ENST00000282928 A0A1B0GVX0 72 aa11.72□□□□□ -0.53
ZIC1-201ENST00000282928 A0A1B0GU69 56 aa11.71□□□□□ -0.53
ZIC1-201ENST00000282928 FAM229BQ4G0N7 80 aa11.7□□□□□ -0.54
ZIC1-201ENST00000282928 C8orf17Q9NRJ1 99 aa11.7□□□□□ -0.54
ZIC1-201ENST00000282928 PSORS1C2Q9UIG4 136 aa11.7□□□□□ -0.54
ZIC1-201ENST00000282928 Q8N377 158 aa11.69□□□□□ -0.54
ZIC1-201ENST00000282928 CASC10Q5T4H9 136 aa11.68□□□□□ -0.54
ZIC1-201ENST00000282928 MGAM2Q2M2H8 2515 aa11.68□□□□□ -0.54
ZIC1-201ENST00000282928 C4orf26Q17RF5 130 aa11.67□□□□□ -0.54
ZIC1-201ENST00000282928 BPTFQ12830 3046 aa11.66□□□□□ -0.54
ZIC1-201ENST00000282928 USP34Q70CQ2 3546 aa11.65□□□□□ -0.54
ZIC1-201ENST00000282928 A0A1W2PNN7 141 aa11.63□□□□□ -0.55
ZIC1-201ENST00000282928 CFAP46Q8IYW2 2715 aa11.61□□□□□ -0.55
ZIC1-201ENST00000282928 USP24Q9UPU5 2620 aa11.6□□□□□ -0.55
ZIC1-201ENST00000282928 C5orf42Q9H799 3197 aa11.6□□□□□ -0.55
ZIC1-201ENST00000282928 IGLV5-48A0A075B6I7 105 aa11.59□□□□□ -0.55
ZIC1-201ENST00000282928 K7EQZ3 153 aa11.58□□□□□ -0.56
ZIC1-201ENST00000282928 RBM12B-AS1Q9P1G2 102 aa11.58□□□□□ -0.56
ZIC1-201ENST00000282928 ZNF292O60281 2723 aa11.58□□□□□ -0.56
ZIC1-201ENST00000282928 CENPEQ02224 2701 aa11.57□□□□□ -0.56
ZIC1-201ENST00000282928 MAST4O15021 2626 aa11.57□□□□□ -0.56
ZIC1-201ENST00000282928 COX6B2Q6YFQ2 88 aa11.57□□□□□ -0.56
ZIC1-201ENST00000282928 FLNAP21333 2647 aaKnown RBP11.56□□□□□ -0.56
ZIC1-201ENST00000282928 PLAC8Q9NZF1 115 aa11.56□□□□□ -0.56
ZIC1-201ENST00000282928 ATRQ13535 2644 aa11.54□□□□□ -0.56
ZIC1-201ENST00000282928 LINC01600Q96MT4 127 aa11.54□□□□□ -0.56
ZIC1-201ENST00000282928 ITPR3Q14573 2671 aa11.54□□□□□ -0.56
ZIC1-201ENST00000282928 TNP2Q05952 138 aa11.53□□□□□ -0.56
ZIC1-201ENST00000282928 LAMA3Q16787 3333 aa11.52□□□□□ -0.56
ZIC1-201ENST00000282928 TRANK1O15050 2925 aa11.52□□□□□ -0.57
ZIC1-201ENST00000282928 CR1P17927 2039 aa11.51□□□□□ -0.57
ZIC1-201ENST00000282928 DSCR10P59022 87 aa11.5□□□□□ -0.57
ZIC1-201ENST00000282928 MKI67P46013 3256 aaKnown RBP11.49□□□□□ -0.57
ZIC1-201ENST00000282928 KRTAP21-3Q3LHN1 58 aa11.48□□□□□ -0.57
ZIC1-201ENST00000282928 SMR3BP02814 79 aaPredicted RBP11.48□□□□□ -0.57
ZIC1-201ENST00000282928 PSPHP1O15172 72 aa11.47□□□□□ -0.57
ZIC1-201ENST00000282928 CYP4F30PQ9H0H9 118 aa11.46□□□□□ -0.57
ZIC1-201ENST00000282928 OBSCN-AS1Q96MR7 158 aa11.46□□□□□ -0.58
ZIC1-201ENST00000282928 EIF4EBP3O60516 100 aaPredicted RBP11.45□□□□□ -0.58
ZIC1-201ENST00000282928 LCE6AA0A183 80 aa11.44□□□□□ -0.58
ZIC1-201ENST00000282928 KLKP1Q107X0 134 aa11.43□□□□□ -0.58
ZIC1-201ENST00000282928 A0A0C4DFX4 3053 aa11.42□□□□□ -0.58
ZIC1-201ENST00000282928 A0A1W2PNM2 257 aa11.42□□□□□ -0.58
ZIC1-201ENST00000282928 SPANXA2-OT1Q8N9U9 137 aa11.41□□□□□ -0.58
ZIC1-201ENST00000282928 SPRR1AP35321 89 aa11.4□□□□□ -0.59
ZIC1-201ENST00000282928 SPRR1BP22528 89 aa11.39□□□□□ -0.59
ZIC1-201ENST00000282928 A8MUN3 132 aa11.36□□□□□ -0.59
ZIC1-201ENST00000282928 COA5Q86WW8 74 aa11.36□□□□□ -0.59
ZIC1-201ENST00000282928 UQCR11O14957 56 aa11.34□□□□□ -0.59
ZIC1-201ENST00000282928 FAM104AQ969W3 186 aa11.33□□□□□ -0.59
ZIC1-201ENST00000282928 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.33□□□□□ -0.6
ZIC1-201ENST00000282928 BRCA2P51587 3418 aa11.33□□□□□ -0.6
ZIC1-201ENST00000282928 IGLV7-46A0A075B6I9 117 aa11.32□□□□□ -0.6
ZIC1-201ENST00000282928 TEP1Q99973 2627 aaKnown RBP11.32□□□□□ -0.6
ZIC1-201ENST00000282928 C9orf92A6NGG3 77 aa11.31□□□□□ -0.6
ZIC1-201ENST00000282928 IGLV8-61A0A075B6I0 122 aa11.31□□□□□ -0.6
ZIC1-201ENST00000282928 SETXQ7Z333 2677 aaKnown RBP11.3□□□□□ -0.6
ZIC1-201ENST00000282928 PRUNE2Q8WUY3 3088 aa11.29□□□□□ -0.6
ZIC1-201ENST00000282928 Q6ZSA8 131 aa11.28□□□□□ -0.6
ZIC1-201ENST00000282928 MGAQ8IWI9 3026 aa11.27□□□□□ -0.61
ZIC1-201ENST00000282928 ANAPC11Q9NYG5 84 aa11.25□□□□□ -0.61
ZIC1-201ENST00000282928 DSPP15924 2871 aaKnown RBP11.19□□□□□ -0.62
ZIC1-201ENST00000282928 PRR26Q8N8Z3 221 aa11.19□□□□□ -0.62
ZIC1-201ENST00000282928 BAHCC1Q9P281 2608 aa11.19□□□□□ -0.62
ZIC1-201ENST00000282928 KRTAP26-1Q6PEX3 210 aa11.18□□□□□ -0.62
ZIC1-201ENST00000282928 FP248Q71RG6 208 aaPredicted RBP11.16□□□□□ -0.62
ZIC1-201ENST00000282928 Q6ZR54 194 aa11.15□□□□□ -0.62
ZIC1-201ENST00000282928 SEC61BP60468 96 aaKnown RBP11.15□□□□□ -0.62
ZIC1-201ENST00000282928 STAB1Q9NY15 2570 aa11.14□□□□□ -0.63
ZIC1-201ENST00000282928 IGSF10Q6WRI0 2623 aa11.14□□□□□ -0.63
ZIC1-201ENST00000282928 UNC79Q9P2D8 2635 aa11.14□□□□□ -0.63
ZIC1-201ENST00000282928 WDFY4Q6ZS81 3184 aa11.13□□□□□ -0.63
ZIC1-201ENST00000282928 AKAP13Q12802 2813 aa11.11□□□□□ -0.63
ZIC1-201ENST00000282928 OXTP01178 125 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms